FFCP PHASE1:Hg19::chr1:192544895..192544912,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:192544895..192544912,+
|short_description=p1@RGS1
|description=CAGE_peak_1_at_RGS1_5end
|association_with_transcript=0bp_to_ENST00000462589,ENST00000469578...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5996 | |EntrezGene=5996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9991 | |HGNC=9991 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000462589,ENST00000469578,ENST00000498352_5end | |||
|cluster_id=chr1:192544895..192544912,+ | |||
|coexpression_cluster_id=C537 | |||
|description=CAGE_peak_1_at_RGS1_5end | |||
|id=chr1:192544895..192544912,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.28e-55!140;CL:0000037!1.44e-50!172;CL:0000566!1.44e-50!172;CL:0000988!1.27e-47!182;CL:0002032!4.60e-46!165;CL:0000837!4.60e-46!165;CL:0002031!8.26e-43!124;CL:0002087!5.73e-41!119;CL:0000766!1.05e-30!76;CL:0000763!4.31e-29!112;CL:0000049!4.31e-29!112;CL:0000557!1.45e-27!71;CL:0002057!1.28e-25!42;CL:0000839!1.33e-25!70;CL:0002009!3.60e-25!65;CL:0002194!1.25e-23!63;CL:0000576!1.25e-23!63;CL:0000040!1.25e-23!63;CL:0000559!1.25e-23!63;CL:0000860!2.96e-23!45;CL:0000542!6.42e-15!53;CL:0000051!6.42e-15!53;CL:0000838!7.31e-15!52;CL:0000791!8.29e-10!18;CL:0000789!8.29e-10!18;CL:0002420!8.29e-10!18;CL:0002419!8.29e-10!18;CL:0000790!8.29e-10!18;CL:0000084!1.03e-08!25;CL:0000827!1.03e-08!25;CL:0000451!2.11e-08!10;CL:0000990!6.66e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.88e-21;33!CL:0002057;2.88e-21;33!CL:0000473;9.38e-20;39!CL:0000234;9.38e-20;39!CL:0000576;1.78e-15;48!CL:0000766;1.90e-14;69!CL:0002087;3.92e-13;104!CL:0000738;2.82e-11;136!CL:0000791;2.48e-10;18!CL:0000789;2.48e-10;18!CL:0002419;2.48e-10;18!CL:0000084;2.59e-09;25!CL:0000451;7.80e-09;10!CL:0000542;1.77e-08;53!CL:0000988;3.76e-08;177!CL:0000763;2.70e-07;100!CL:0000990;3.04e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.31e-58,136;CL:0000037,1.82e-46,168;CL:0000988,1.60e-44,177;CL:0002087,1.09e-43,115;CL:0002031,1.25e-43,120;CL:0002032,6.46e-42,161;CL:0000837,6.46e-42,161;CL:0000766,1.96e-33,72;CL:0000557,4.67e-30,67;CL:0000473,1.53e-29,48;CL:0000234,1.53e-29,48;CL:0002009,3.04e-28,61;CL:0000860,4.06e-27,42;CL:0002057,4.06e-27,42;CL:0000839,1.40e-26,66;CL:0002194,1.48e-26,59;CL:0000576,1.48e-26,59;CL:0000040,1.48e-26,59;CL:0000559,1.48e-26,59;CL:0000763,2.08e-25,108;CL:0000049,2.08e-25,108;CL:0000542,7.09e-15,53;CL:0000051,7.09e-15,53;CL:0000838,8.25e-15,52;CL:0000791,2.55e-10,18;CL:0000789,2.55e-10,18;CL:0002420,2.55e-10,18;CL:0002419,2.55e-10,18;CL:0000790,2.55e-10,18;CL:0000084,2.64e-09,25;CL:0000827,2.64e-09,25;CL:0000451,7.93e-09,10;CL:0000990,3.09e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-19;42!CL:0000790;2.48e-10;18!CL:0000051;1.77e-08;53!CL:0000049;1.97e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.25e-33!115;UBERON:0002390!1.19e-30!102;UBERON:0003061!1.19e-30!102;UBERON:0002193!1.44e-26!112;UBERON:0002371!4.55e-23!80;UBERON:0001474!1.56e-20!86;UBERON:0002405!4.61e-19!115;UBERON:0004765!4.63e-15!101;UBERON:0001434!4.63e-15!101;UBERON:0001049!7.58e-13!57;UBERON:0005068!7.58e-13!57;UBERON:0006241!7.58e-13!57;UBERON:0007135!7.58e-13!57;UBERON:0003080!3.74e-10!42;UBERON:0002780!9.15e-10!41;UBERON:0001890!9.15e-10!41;UBERON:0006240!9.15e-10!41;UBERON:0002616!3.25e-09!59;UBERON:0002020!1.04e-07!34;UBERON:0003528!1.04e-07!34;UBERON:0001893!1.72e-07!34;UBERON:0002791!2.63e-07!33;UBERON:0001017!3.44e-07!82;UBERON:0000955!5.00e-07!69;UBERON:0006238!5.00e-07!69;UBERON:0001869!9.67e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.24e-09;114!UBERON:0002780;1.74e-07;41!UBERON:0001890;1.74e-07;41!UBERON:0000073;5.84e-07;53!UBERON:0002616;5.84e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.28e-33,98;UBERON:0003061,2.28e-33,98;UBERON:0007023,7.62e-33,114;UBERON:0002193,3.66e-29,108;UBERON:0002371,2.69e-25,76;UBERON:0002405,1.81e-24,93;UBERON:0001474,1.22e-22,82;UBERON:0004765,2.40e-18,90;UBERON:0001434,3.21e-15,100;UBERON:0001049,8.10e-13,56;UBERON:0005068,8.10e-13,56;UBERON:0006241,8.10e-13,56;UBERON:0007135,8.10e-13,56;UBERON:0000073,2.25e-11,53;UBERON:0002616,2.25e-11,53;UBERON:0002780,7.61e-10,41;UBERON:0001890,7.61e-10,41;UBERON:0003080,7.61e-10,41;UBERON:0006240,7.61e-10,41;UBERON:0003528,1.10e-07,34;UBERON:0002020,1.10e-07,34;UBERON:0003081,1.55e-07,203;UBERON:0001017,1.67e-07,81;UBERON:0001893,1.84e-07,34;UBERON:0000955,3.50e-07,68;UBERON:0006238,3.50e-07,68;UBERON:0003075,5.37e-07,82;UBERON:0007284,5.37e-07,82;UBERON:0002791,6.42e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74022690387308,0,0,0,0,0,0,0.572471974262113,0,0,575.775012310813,461.569513887595,369.940672174292,687.994120208733,1424.39089633876,707.354867431151,0,0,0,4.880433636559,24.4531079878365,128.596992428663,271.45775018062,549.692330515658,175.344783538408,4.47830948479849,20.4053009591957,3.60605794687861,78.3696507021854,106.938892063933,42.9373788302435,292.395728427351,523.416721451784,884.211688905521,548.629392158341,715.456853335778,1787.33269349793,2655.92072439491,3768.98506744596,3319.30318642732,264.668729396902,415.363160388041,766.756528926629,4364.14413742433,7699.40828858256,7000.7415274995,193.622713209602,304.38154153061,289.406605611699,251.030991413725,494.759915930674,505.731666184407,406.520340385411,549.642996014892,1208.65592078397,92.0207244002721,571.198613416713,597.48098748839,39.927249112957,70.7972318883595,29.1425517256643,15.0520365736303,65.0265946003722,10.4471631353102,23.3710449867824,45.9497524329898,16.8051021463463,0,1.09227722252426,1.77901850772711,6.82768356106412,3.2031678962881,0.574752439954483,1.98313461835459,0,150.841436814004,549.654009251199,470.196070594031,881.582761622102,1226.95324436658,7.90152254325231,375.715660917421,740.825287782176,872.161558755918,5.01559486172034,1809.84634661633,1096.03167027591,674.100480291373,221.706809201495,3145.21266820136,2263.41180096086,2119.31103782501,112.720361358594,214.337804778679,5.26201294731764,14.3702009248641,13.9105481152825,209.973773437478,150.893027042598,116.034431423524,7.3651072753418,498.953082669701,706.498027912287,1009.2955514658,34.4050647470024,42.3204245006672,41.8198899557285,14.3046363123884,7.55121005811069,42.4764470277976,34.5694787984265,48.4465518183417,541.112498815182,626.879818916541,270.387162049186,0,0,0,0,0,0,0,0,0,0,3.77689578480442,10.6093051153147,0,0,25.63924409872,31.8657419257659,20.0766520383486,1059.37535316433,1691.96094608762,888.15488567899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,196.352821979734,213.279145281579,0,0,0,0.132409180813219,0,7.4480360261655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97529702878181,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.404493924480493,0,0,0,0,0,0,7.60530208930985,33.4161253670393,75.6211080552197,14.5682822806835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93947209739836,117.938149630176,19.0247887729572,0,0,0,0,0,0,5.41929561685538,0.352193736052904,3312.27397387937,3593.91927835877,2415.77520604721,9.39768835524102,11.8416411923066,3.51652341630141,0,2.26220483947312,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2944155433866,0,0,0,5.68627117988073,0,0,0,0.099972991182057,158.110914833548,259.666916270409,96.9836121621945,0,0,0,0,0,0,6.38885320763105,439.969687530903,633.082559787543,361.413990163771,0,0,1.54657762555539,17.756724125441,0,57.673540843933,272.236927875663,72.9371303647422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,281.204515527127,342.769865100782,386.247031690665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,76.5594716542576,0,0,0,0,0,0,0,0,0,0,0,2.21589231281862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87073702455959,0,8.675057946793,0,0,0,0,0,3.16661452946496,0,0,0,0,9.38423185750102,0,75.879903426084,0,0,0,0,15.2234282769651,9.1756464857085,5.12682468456746,5.00286728461357,4.52498500394814,7.13320642311989,8.64050299580984,7.13812658664843,31.2994528403496,0,0,4.45927620301725,0.144269212976445,1.63626239701352,0,0.399158742865633,5.93666647410337,42.5463901275005,1.94773164164733,0.280797178113459,0.912938716132769,0.156679895773023,0,1.18504244461122,0.321176150207399,0,0,8.93113896364988,0.307240764308458,0.223676107892416,0,0.976940477010201,1.11362469558097,2.46174797895425,5.67956924799565,0,0,0,173.026159720107,0,79.0133594527322,0,8.11731248108146,23.7571744666111,0.307160702099232,56.666415922679,28.1338832821025,0,0,0,59.3759004988188,116.039244523082,0,0,223.398921911841,0,0,0.179021174675609,0.511572370226872,146.584100776483,9.57932369387759,0,8.72399471485697,55.1042503081396,5.98841394003583,0.260427761085233,0,71.7749579680446,0,0.254253650292766,0,0,0.583209226766509,0,287.865950389498,32.6816348674856,15.2581736317083,7.96170671504817,6.50204761697804,89.9480128331287,0,0,40.4758359729973,0.113942055847001,0,0,0,55.1872006336221,0.915975934018623,181.231823846336,0,1.2558420511602,0.997270091400938,0,0.19606253431774,0,0,1.90723894776454,0,0,0,0,14.9289289661776,55.7282656371037,168.644320001681,183.250057524624,50.4140870901732,38.1140115694912,45.293561363015,24.8799070662625,18.5068912123018,3.46664099509765,0,0,10.6537788769335,129.46006617207,1.53036380815245,63.3761393673734,0.901940516486955,0,0,0,0,0,0,2.63481878724963,0,0,0,20.0935668478335,0,0.290268993867255,0,0,44.7119366011613,135.473154471453,94.9119111278236,0,0,9.62324098529356,0,0,68.3049583165928,0,0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| ||
|short_description=p1@RGS1 | |||
}} | }} |
Latest revision as of 10:12, 19 September 2015
Short description: | p1@RGS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGS1_5end |
Coexpression cluster: | C537_immature_CD14_migratory_Mast_CD4_Dendritic_Basophils |
Association with transcript: | 0bp_to_ENST00000462589, ENST00000469578, ENST00000498352_5end |
EntrezGene: | RGS1 |
HGNC: | 9991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.28e-33 | 98 |
blood island | 2.28e-33 | 98 |
adult organism | 7.62e-33 | 114 |
hemolymphoid system | 3.66e-29 | 108 |
bone marrow | 2.69e-25 | 76 |
immune system | 1.81e-24 | 93 |
bone element | 1.22e-22 | 82 |
skeletal element | 2.40e-18 | 90 |
skeletal system | 3.21e-15 | 100 |
neural tube | 8.10e-13 | 56 |
neural rod | 8.10e-13 | 56 |
future spinal cord | 8.10e-13 | 56 |
neural keel | 8.10e-13 | 56 |
regional part of nervous system | 2.25e-11 | 53 |
regional part of brain | 2.25e-11 | 53 |
regional part of forebrain | 7.61e-10 | 41 |
forebrain | 7.61e-10 | 41 |
anterior neural tube | 7.61e-10 | 41 |
future forebrain | 7.61e-10 | 41 |
brain grey matter | 1.10e-07 | 34 |
gray matter | 1.10e-07 | 34 |
lateral plate mesoderm | 1.55e-07 | 203 |
central nervous system | 1.67e-07 | 81 |
telencephalon | 1.84e-07 | 34 |
brain | 3.50e-07 | 68 |
future brain | 3.50e-07 | 68 |
neural plate | 5.37e-07 | 82 |
presumptive neural plate | 5.37e-07 | 82 |
regional part of telencephalon | 6.42e-07 | 32 |