FFCP PHASE1:Hg19::chr3:9773409..9773479,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7862 | |EntrezGene=7862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14255 | |HGNC=14255 | ||
|TSSclassifier=strong | |||
|UniProt=P55201,C9JDK5 | |UniProt=P55201,C9JDK5 | ||
|association_with_transcript=0bp_to_ENST00000302054,ENST00000383829,ENST00000420291,ENST00000424362,ENST00000433861,NM_001003694,NM_004634,uc003bse.2,uc003bsf.2,uc003bsg.2,uc011ati.1_5end | |association_with_transcript=0bp_to_ENST00000302054,ENST00000383829,ENST00000420291,ENST00000424362,ENST00000433861,NM_001003694,NM_004634,uc003bse.2,uc003bsf.2,uc003bsg.2,uc011ati.1_5end | ||
|cluster_id=chr3:9773409..9773479,+ | |||
|description=CAGE_peak_1_at_BRPF1_5end | |description=CAGE_peak_1_at_BRPF1_5end | ||
|id=chr3:9773409..9773479,+ | |id=chr3:9773409..9773479,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.22e-23!172;CL:0000566!1.22e-23!172;CL:0000988!2.02e-22!182;CL:0000763!7.37e-22!112;CL:0000049!7.37e-22!112;CL:0002032!2.08e-20!165;CL:0000837!2.08e-20!165;CL:0000738!8.90e-15!140;CL:0000766!6.47e-13!76;CL:0000557!2.00e-10!71;CL:0002031!6.80e-10!124;CL:0000839!1.26e-09!70;CL:0002087!6.98e-09!119;CL:0002009!1.29e-08!65;CL:0002194!5.64e-08!63;CL:0000576!5.64e-08!63;CL:0000040!5.64e-08!63;CL:0000559!5.64e-08!63 | |ontology_enrichment_celltype=CL:0000037!1.22e-23!172;CL:0000566!1.22e-23!172;CL:0000988!2.02e-22!182;CL:0000763!7.37e-22!112;CL:0000049!7.37e-22!112;CL:0002032!2.08e-20!165;CL:0000837!2.08e-20!165;CL:0000738!8.90e-15!140;CL:0000766!6.47e-13!76;CL:0000557!2.00e-10!71;CL:0002031!6.80e-10!124;CL:0000839!1.26e-09!70;CL:0002087!6.98e-09!119;CL:0002009!1.29e-08!65;CL:0002194!5.64e-08!63;CL:0000576!5.64e-08!63;CL:0000040!5.64e-08!63;CL:0000559!5.64e-08!63 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.29e-22,168;CL:0000988,2.98e-21,177;CL:0000763,7.39e-21,108;CL:0000049,7.39e-21,108;CL:0002032,1.96e-19,161;CL:0000837,1.96e-19,161;CL:0000738,6.75e-14,136;CL:0000766,5.15e-12,72;CL:0000557,1.44e-09,67;CL:0002031,3.97e-09,120;CL:0000839,8.73e-09,66;CL:0002087,3.82e-08,115;CL:0002009,8.56e-08,61;CL:0002194,3.62e-07,59;CL:0000576,3.62e-07,59;CL:0000040,3.62e-07,59;CL:0000559,3.62e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!6.65e-10!31;DOID:1240!1.51e-08!39;DOID:2531!2.29e-07!51;DOID:0060083!2.29e-07!51 | |ontology_enrichment_disease=DOID:8692!6.65e-10!31;DOID:1240!1.51e-08!39;DOID:2531!2.29e-07!51;DOID:0060083!2.29e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.17e-09;31!DOID:1240;3.60e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.65e-10,31;DOID:1240,1.51e-08,39;DOID:2531,2.29e-07,51;DOID:0060083,2.29e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.05e-12!102;UBERON:0003061!2.05e-12!102;UBERON:0002193!1.91e-11!112;UBERON:0002371!1.56e-08!80;UBERON:0001474!5.99e-08!86 | |ontology_enrichment_uberon=UBERON:0002390!2.05e-12!102;UBERON:0003061!2.05e-12!102;UBERON:0002193!1.91e-11!112;UBERON:0002371!1.56e-08!80;UBERON:0001474!5.99e-08!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.50e-11,98;UBERON:0003061,1.50e-11,98;UBERON:0002193,1.28e-10,108;UBERON:0002405,4.46e-08,93;UBERON:0002371,9.63e-08,76;UBERON:0001474,3.42e-07,82 | |||
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| ||
|short_description=p1@BRPF1 | |short_description=p1@BRPF1 | ||
}} | }} |
Latest revision as of 21:22, 19 September 2015
Short description: | p1@BRPF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BRPF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000302054, ENST00000383829, ENST00000420291, ENST00000424362, ENST00000433861, NM_001003694, NM_004634, uc003bse.2, uc003bsf.2, uc003bsg.2, uc011ati.1_5end |
EntrezGene: | BRPF1 |
HGNC: | 14255 |
UniProt: | P55201C9JDK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.29e-22 | 168 |
hematopoietic cell | 2.98e-21 | 177 |
myeloid cell | 7.39e-21 | 108 |
common myeloid progenitor | 7.39e-21 | 108 |
hematopoietic oligopotent progenitor cell | 1.96e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-19 | 161 |
leukocyte | 6.75e-14 | 136 |
myeloid leukocyte | 5.15e-12 | 72 |
granulocyte monocyte progenitor cell | 1.44e-09 | 67 |
hematopoietic lineage restricted progenitor cell | 3.97e-09 | 120 |
myeloid lineage restricted progenitor cell | 8.73e-09 | 66 |
nongranular leukocyte | 3.82e-08 | 115 |
macrophage dendritic cell progenitor | 8.56e-08 | 61 |
monopoietic cell | 3.62e-07 | 59 |
monocyte | 3.62e-07 | 59 |
monoblast | 3.62e-07 | 59 |
promonocyte | 3.62e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.50e-11 | 98 |
blood island | 1.50e-11 | 98 |
hemolymphoid system | 1.28e-10 | 108 |
immune system | 4.46e-08 | 93 |
bone marrow | 9.63e-08 | 76 |
bone element | 3.42e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.65e-10 | 31 |
leukemia | 1.51e-08 | 39 |
hematologic cancer | 2.29e-07 | 51 |
immune system cancer | 2.29e-07 | 51 |