FFCP PHASE1:Hg19::chr1:18957333..18957375,+: Difference between revisions
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|id=chr1:18957333..18957375,+
|short_description=p1@PAX7
|description=CAGE_peak_1_at_PAX7_5end
|association_with_transcript=-124bp_to_ENST00000375375,NM_001135254,N...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5081 | |EntrezGene=5081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8621 | |HGNC=8621 | ||
|TSSclassifier=strong | |||
|UniProt=P23759,E9PFV9,Q2PJS5 | |UniProt=P23759,E9PFV9,Q2PJS5 | ||
|association_with_transcript=-124bp_to_ENST00000375375,NM_001135254,NM_002584,NM_013945,uc001bay.2,uc001baz.2,uc010oct.1_5end | |||
|cluster_id=chr1:18957333..18957375,+ | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_1_at_PAX7_5end | |||
|id=chr1:18957333..18957375,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.14e-19!5;CL:0000188!8.69e-11!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.39e-11;1 | |||
|ontology_enrichment_disease=DOID:171!8.69e-11!10;DOID:3095!2.02e-08!22;DOID:2994!2.02e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:171;7.11e-27;10!DOID:3095;3.44e-12;22!DOID:2994;3.44e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.50e-27,10;DOID:3095,3.52e-12,22;DOID:2994,3.52e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0000341!6.17e-09!2;UBERON:0002148!9.20e-09!2;UBERON:0009662!9.20e-09!2;UBERON:0003076!1.21e-08!15;UBERON:0003057!1.21e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.68e-43;4!UBERON:0000923;2.68e-43;4!UBERON:0010316;2.68e-43;4!UBERON:0005291;2.68e-43;4!UBERON:0002050;1.00e-34;5!UBERON:0005423;1.00e-34;5!UBERON:0001134;2.32e-16;16!UBERON:0002036;2.32e-16;16!UBERON:0001723;9.97e-15;3!UBERON:0001033;9.97e-15;3!UBERON:0002426;9.11e-12;1!UBERON:0003831;9.11e-12;1!UBERON:0003898;9.11e-12;1!UBERON:0004830;9.11e-12;1!UBERON:0003830;9.11e-12;1!UBERON:0005175;9.11e-12;1!UBERON:0001774;9.11e-12;1!UBERON:0001103;9.11e-12;1!UBERON:0000989;1.39e-11;1!UBERON:0008811;1.39e-11;1!UBERON:0002385;2.15e-08;31!UBERON:0001015;2.15e-08;31!UBERON:0000383;2.15e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.07e-14,3;UBERON:0001033,1.07e-14,3;UBERON:0010056,1.07e-14,3;UBERON:0002426,8.64e-12,1;UBERON:0003831,8.64e-12,1;UBERON:0003898,8.64e-12,1;UBERON:0004830,8.64e-12,1;UBERON:0003830,8.64e-12,1;UBERON:0005175,8.64e-12,1;UBERON:0001774,8.64e-12,1;UBERON:0001103,8.64e-12,1;UBERON:0010084,8.64e-12,1;UBERON:0000989,1.19e-11,1;UBERON:0008811,1.19e-11,1;UBERON:0006258,1.19e-11,1;UBERON:0005876,1.19e-11,1;UBERON:0004874,1.19e-11,1 | |||
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| ||
|short_description=p1@PAX7 | |||
}} | }} |
Latest revision as of 09:08, 19 September 2015
Short description: | p1@PAX7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAX7_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | -124bp_to_ENST00000375375, NM_001135254, NM_002584, NM_013945, uc001bay.2, uc001baz.2, uc010oct.1_5end |
EntrezGene: | PAX7 |
HGNC: | 8621 |
UniProt: | P23759E9PFV9Q2PJS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.07e-14 | 3 |
gustatory system | 1.07e-14 | 3 |
future tongue | 1.07e-14 | 3 |
chest muscle | 8.64e-12 | 1 |
respiratory system muscle | 8.64e-12 | 1 |
skeletal muscle of trunk | 8.64e-12 | 1 |
respiratory system skeletal muscle | 8.64e-12 | 1 |
thoracic segment muscle | 8.64e-12 | 1 |
chest organ | 8.64e-12 | 1 |
muscle of trunk | 8.64e-12 | 1 |
diaphragm | 8.64e-12 | 1 |
future diaphragm | 8.64e-12 | 1 |
penis | 1.19e-11 | 1 |
intromittent organ | 1.19e-11 | 1 |
lateral plate mesenchyme | 1.19e-11 | 1 |
undifferentiated genital tubercle | 1.19e-11 | 1 |
somatopleure | 1.19e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.50e-27 | 10 |
germ cell and embryonal cancer | 3.52e-12 | 22 |
germ cell cancer | 3.52e-12 | 22 |