FFCP PHASE1:Hg19::chr19:45418067..45418076,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=341 | |EntrezGene=341 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=607 | |HGNC=607 | ||
|TSSclassifier=strong | |||
|UniProt=P02654 | |UniProt=P02654 | ||
|association_with_transcript=-50bp_to_BC009698_5end | |association_with_transcript=-50bp_to_BC009698_5end | ||
|cluster_id=chr19:45418067..45418076,+ | |||
|coexpression_cluster_id=C166 | |coexpression_cluster_id=C166 | ||
|description=CAGE_peak_7_at_APOC1_5end | |description=CAGE_peak_7_at_APOC1_5end | ||
|id=chr19:45418067..45418076,+ | |id=chr19:45418067..45418076,+ | ||
|ontology_enrichment_celltype=CL:0000235!5.68e-17!10;CL:0000840!1.68e-07!5;CL:0001029!1.68e-07!5 | |ontology_enrichment_celltype=CL:0000235!5.68e-17!10;CL:0000840!1.68e-07!5;CL:0001029!1.68e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000235;4.38e-107;6!CL:0000473;3.03e-14;39!CL:0000234;3.03e-14;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,6.32e-107,6;CL:0002194,2.03e-14,59;CL:0000576,2.03e-14,59;CL:0000040,2.03e-14,59;CL:0000559,2.03e-14,59;CL:0002009,6.05e-14,61;CL:0000473,2.11e-13,48;CL:0000234,2.11e-13,48;CL:0000839,6.99e-13,66;CL:0000557,1.09e-12,67;CL:0000766,8.49e-12,72;CL:0000763,8.88e-08,108;CL:0000049,8.88e-08,108;CL:0002087,2.78e-07,115;CL:0002031,5.78e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.51e-07;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.27e-11!115;UBERON:0005057!8.78e-10!26;UBERON:0002107!3.92e-08!19;UBERON:0006925!3.92e-08!19;UBERON:0008836!3.92e-08!19;UBERON:0008835!6.16e-07!22;UBERON:0003894!6.16e-07!22 | |ontology_enrichment_uberon=UBERON:0002405!4.27e-11!115;UBERON:0005057!8.78e-10!26;UBERON:0002107!3.92e-08!19;UBERON:0006925!3.92e-08!19;UBERON:0008836!3.92e-08!19;UBERON:0008835!6.16e-07!22;UBERON:0003894!6.16e-07!22 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.62e-11,76;UBERON:0001474,2.46e-10,82;UBERON:0004765,2.15e-09,90;UBERON:0002405,4.40e-09,93;UBERON:0002390,1.32e-08,98;UBERON:0003061,1.32e-08,98;UBERON:0001434,2.00e-08,100;UBERON:0002193,8.88e-08,108 | |||
|phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.174129737299267,2.52620124985844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,7.72214074959484,3.41851673264075,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.664846727600626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93104467356165,5.30027555648885,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.174129737299267,2.52620124985844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,7.72214074959484,3.41851673264075,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.664846727600626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93104467356165,5.30027555648885,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@APOC1 | |short_description=p7@APOC1 | ||
}} | }} |
Latest revision as of 14:55, 18 September 2015
Short description: | p7@APOC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_APOC1_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -50bp_to_BC009698_5end |
EntrezGene: | APOC1 |
HGNC: | 607 |
UniProt: | P02654 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 6.32e-107 | 6 |
monopoietic cell | 2.03e-14 | 59 |
monocyte | 2.03e-14 | 59 |
monoblast | 2.03e-14 | 59 |
promonocyte | 2.03e-14 | 59 |
macrophage dendritic cell progenitor | 6.05e-14 | 61 |
defensive cell | 2.11e-13 | 48 |
phagocyte | 2.11e-13 | 48 |
myeloid lineage restricted progenitor cell | 6.99e-13 | 66 |
granulocyte monocyte progenitor cell | 1.09e-12 | 67 |
myeloid leukocyte | 8.49e-12 | 72 |
myeloid cell | 8.88e-08 | 108 |
common myeloid progenitor | 8.88e-08 | 108 |
nongranular leukocyte | 2.78e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 5.78e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.62e-11 | 76 |
bone element | 2.46e-10 | 82 |
skeletal element | 2.15e-09 | 90 |
immune system | 4.40e-09 | 93 |
hematopoietic system | 1.32e-08 | 98 |
blood island | 1.32e-08 | 98 |
skeletal system | 2.00e-08 | 100 |
hemolymphoid system | 8.88e-08 | 108 |