FFCP PHASE1:Hg19::chr1:2488990..2488993,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8764 | |EntrezGene=8764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |HGNC=11912 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-258bp_to_ENST00000466750_5end | |association_with_transcript=-258bp_to_ENST00000466750_5end | ||
|cluster_id=chr1:2488990..2488993,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_29_at_TNFRSF14_5end | |description=CAGE_peak_29_at_TNFRSF14_5end | ||
|id=chr1:2488990..2488993,+ | |id=chr1:2488990..2488993,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.80e-42!10;CL:0000541!1.80e-42!10;CL:0000147!2.73e-30!14;CL:0000710!3.92e-21!20;CL:0002567!4.52e-17!3;CL:0000075!1.40e-15!27;CL:0002566!3.76e-13!1;CL:0002077!1.10e-12!33;CL:0000325!1.12e-10!39;CL:0000333!1.19e-09!41 | |ontology_enrichment_celltype=CL:0000148!1.80e-42!10;CL:0000541!1.80e-42!10;CL:0000147!2.73e-30!14;CL:0000710!3.92e-21!20;CL:0002567!4.52e-17!3;CL:0000075!1.40e-15!27;CL:0002566!3.76e-13!1;CL:0002077!1.10e-12!33;CL:0000325!1.12e-10!39;CL:0000333!1.19e-09!41 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.78e-79;10!CL:0002567;2.83e-66;3!CL:0000147;9.12e-57;14!CL:0000710;4.28e-40;20!CL:0000075;5.44e-30;27!CL:0002077;5.49e-19;34!CL:0000150;7.91e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.79e-79,10;CL:0000541,5.79e-79,10;CL:0002567,3.35e-66,3;CL:0000147,9.13e-57,14;CL:0000710,4.28e-40,20;CL:0000075,5.44e-30,27;CL:0002077,4.91e-24,34;CL:0000333,3.24e-19,41;CL:0000133,7.99e-14,59;CL:0000221,1.50e-11,72;CL:0000150,7.91e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000221;2.84e-08;72!CL:0000133;8.49e-08;59 | |||
|ontology_enrichment_disease=DOID:4929!6.77e-24!2;DOID:1909!3.09e-07!2;DOID:3493!4.69e-07!2 | |ontology_enrichment_disease=DOID:4929!6.77e-24!2;DOID:1909!3.09e-07!2;DOID:3493!4.69e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.26e-14!27;UBERON:0004913!6.82e-13!1;UBERON:0003703!6.82e-13!1;UBERON:0001174!6.82e-13!1;UBERON:0004914!6.82e-13!1;UBERON:0002108!1.51e-12!14;UBERON:0005409!2.64e-11!35 | |ontology_enrichment_uberon=UBERON:0000160!1.26e-14!27;UBERON:0004913!6.82e-13!1;UBERON:0003703!6.82e-13!1;UBERON:0001174!6.82e-13!1;UBERON:0004914!6.82e-13!1;UBERON:0002108!1.51e-12!14;UBERON:0005409!2.64e-11!35 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p29@TNFRSF14 | |short_description=p29@TNFRSF14 | ||
}} | }} |
Latest revision as of 01:09, 17 September 2015
Short description: | p29@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_TNFRSF14_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -258bp_to_ENST00000466750_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.79e-79 | 10 |
melanoblast | 5.79e-79 | 10 |
light melanocyte | 3.35e-66 | 3 |
pigment cell | 9.13e-57 | 14 |
neurecto-epithelial cell | 4.28e-40 | 20 |
columnar/cuboidal epithelial cell | 5.44e-30 | 27 |
ecto-epithelial cell | 4.91e-24 | 34 |
migratory neural crest cell | 3.24e-19 | 41 |
neurectodermal cell | 7.99e-14 | 59 |
ectodermal cell | 1.50e-11 | 72 |
glandular epithelial cell | 7.91e-07 | 9 |