FFCP PHASE1:Hg19::chr8:32585547..32585563,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3084 | |EntrezGene=3084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7997 | |HGNC=7997 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=80bp_to_uc003xiz.1,uc003xja.2_5end | |association_with_transcript=80bp_to_uc003xiz.1,uc003xja.2_5end | ||
|cluster_id=chr8:32585547..32585563,+ | |||
|description=CAGE_peak_22_at_NRG1_5end | |description=CAGE_peak_22_at_NRG1_5end | ||
|id=chr8:32585547..32585563,+ | |id=chr8:32585547..32585563,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002605;8.98e-23;3!CL:0000319;2.66e-18;1!CL:0000312;3.15e-14;5!CL:0000240;5.08e-12;6!CL:0000311;5.08e-12;6!CL:0000079;5.08e-12;6!CL:0000237;5.08e-12;6!CL:0000128;2.46e-10;7!CL:0000126;2.46e-10;7!CL:0000127;2.46e-10;7!CL:0000159;7.98e-10;2!CL:0000362;2.55e-08;9!CL:0002539;1.67e-07;10!CL:0002580;9.11e-07;3!CL:0002582;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.00e-22,3;CL:0000319,2.66e-18,1;CL:0000312,3.60e-14,5;CL:0000240,5.68e-12,6;CL:0000311,5.68e-12,6;CL:0000079,5.68e-12,6;CL:0000237,5.68e-12,6;CL:0000036,5.68e-12,6;CL:0000357,5.68e-12,6;CL:0000114,5.68e-12,6;CL:0000128,2.58e-10,7;CL:0000126,2.58e-10,7;CL:0000127,2.58e-10,7;CL:0002453,2.58e-10,7;CL:0000159,7.98e-10,2;CL:0000362,2.75e-08,9;CL:0002539,1.42e-07,10;CL:0002580,9.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;5.08e-12;6!CL:0000114;5.08e-12;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;2.66e-18;1!DOID:0060084;6.14e-07;3!DOID:127;6.14e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.66e-18,1;DOID:0060084,6.14e-07,3;DOID:127,6.14e-07,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.67e-07;10!UBERON:0004695;1.67e-07;10!UBERON:0002111;1.67e-07;10!UBERON:0004178;1.67e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,1.42e-07,10;UBERON:0004695,1.42e-07,10;UBERON:0002111,1.42e-07,10;UBERON:0004178,1.42e-07,10 | |||
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| ||
|short_description=p22@NRG1 | |short_description=p22@NRG1 | ||
}} | }} |
Latest revision as of 00:46, 18 September 2015
Short description: | p22@NRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_NRG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 80bp_to_uc003xiz.1, uc003xja.2_5end |
EntrezGene: | NRG1 |
HGNC: | 7997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.00e-22 | 3 |
mucus secreting cell | 2.66e-18 | 1 |
keratinocyte | 3.60e-14 | 5 |
stratified squamous epithelial cell | 5.68e-12 | 6 |
keratin accumulating cell | 5.68e-12 | 6 |
stratified epithelial cell | 5.68e-12 | 6 |
keratinizing barrier epithelial cell | 5.68e-12 | 6 |
epithelial fate stem cell | 5.68e-12 | 6 |
stratified epithelial stem cell | 5.68e-12 | 6 |
surface ectodermal cell | 5.68e-12 | 6 |
oligodendrocyte | 2.58e-10 | 7 |
macroglial cell | 2.58e-10 | 7 |
astrocyte | 2.58e-10 | 7 |
oligodendrocyte precursor cell | 2.58e-10 | 7 |
seromucus secreting cell | 7.98e-10 | 2 |
epidermal cell | 2.75e-08 | 9 |
aortic smooth muscle cell | 1.42e-07 | 10 |
preadipocyte of the breast | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 1.42e-07 | 10 |
arterial system smooth muscle | 1.42e-07 | 10 |
artery smooth muscle tissue | 1.42e-07 | 10 |
aorta smooth muscle tissue | 1.42e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.66e-18 | 1 |
cell type benign neoplasm | 6.14e-07 | 3 |
leiomyoma | 6.14e-07 | 3 |