FFCP PHASE1:Hg19::chr22:37257015..37257065,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4689 | |EntrezGene=4689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7662 | |HGNC=7662 | ||
|TSSclassifier=strong | |||
|UniProt=Q15080,A8K4F9,B0QY04 | |UniProt=Q15080,A8K4F9,B0QY04 | ||
|association_with_transcript=0bp_to_ENST00000248899,ENST00000397147,ENST00000447071,NM_000631,NM_013416,uc003apy.3,uc003apz.3_5end | |association_with_transcript=0bp_to_ENST00000248899,ENST00000397147,ENST00000447071,NM_000631,NM_013416,uc003apy.3,uc003apz.3_5end | ||
|cluster_id=chr22:37257015..37257065,+ | |||
|coexpression_cluster_id=C2643 | |coexpression_cluster_id=C2643 | ||
|description=CAGE_peak_1_at_NCF4_5end | |description=CAGE_peak_1_at_NCF4_5end | ||
|id=chr22:37257015..37257065,+ | |id=chr22:37257015..37257065,+ | ||
|ontology_enrichment_celltype=CL:0000037!8.66e-78!172;CL:0000566!8.66e-78!172;CL:0002032!2.66e-75!165;CL:0000837!2.66e-75!165;CL:0000988!1.11e-72!182;CL:0000738!1.26e-62!140;CL:0002031!3.00e-54!124;CL:0000763!4.29e-53!112;CL:0000049!4.29e-53!112;CL:0002087!7.29e-51!119;CL:0000766!2.01e-39!76;CL:0000557!9.46e-35!71;CL:0000839!5.98e-34!70;CL:0002009!6.75e-31!65;CL:0002194!5.18e-30!63;CL:0000576!5.18e-30!63;CL:0000040!5.18e-30!63;CL:0000559!5.18e-30!63;CL:0002057!2.10e-26!42;CL:0000860!3.30e-23!45;CL:0000542!2.71e-18!53;CL:0000051!2.71e-18!53;CL:0000838!5.37e-18!52;CL:0000945!1.22e-12!24;CL:0000826!1.22e-12!24;CL:0000134!5.53e-10!358;CL:0000236!3.90e-09!14;CL:0002320!6.49e-09!365;CL:0000094!2.34e-07!8;CL:0000791!5.51e-07!18;CL:0000789!5.51e-07!18;CL:0002420!5.51e-07!18;CL:0002419!5.51e-07!18;CL:0000790!5.51e-07!18 | |ontology_enrichment_celltype=CL:0000037!8.66e-78!172;CL:0000566!8.66e-78!172;CL:0002032!2.66e-75!165;CL:0000837!2.66e-75!165;CL:0000988!1.11e-72!182;CL:0000738!1.26e-62!140;CL:0002031!3.00e-54!124;CL:0000763!4.29e-53!112;CL:0000049!4.29e-53!112;CL:0002087!7.29e-51!119;CL:0000766!2.01e-39!76;CL:0000557!9.46e-35!71;CL:0000839!5.98e-34!70;CL:0002009!6.75e-31!65;CL:0002194!5.18e-30!63;CL:0000576!5.18e-30!63;CL:0000040!5.18e-30!63;CL:0000559!5.18e-30!63;CL:0002057!2.10e-26!42;CL:0000860!3.30e-23!45;CL:0000542!2.71e-18!53;CL:0000051!2.71e-18!53;CL:0000838!5.37e-18!52;CL:0000945!1.22e-12!24;CL:0000826!1.22e-12!24;CL:0000134!5.53e-10!358;CL:0000236!3.90e-09!14;CL:0002320!6.49e-09!365;CL:0000094!2.34e-07!8;CL:0000791!5.51e-07!18;CL:0000789!5.51e-07!18;CL:0002420!5.51e-07!18;CL:0002419!5.51e-07!18;CL:0000790!5.51e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.54e-21;39!CL:0000234;2.54e-21;39!CL:0000576;5.34e-21;48!CL:0000860;6.61e-21;33!CL:0002057;6.61e-21;33!CL:0000766;1.08e-19;69!CL:0000763;6.70e-19;100!CL:0002087;2.11e-16;104!CL:0000738;3.31e-15;136!CL:0000988;1.85e-14;177!CL:0000945;1.46e-13;24!CL:0000542;4.87e-12;53!CL:0000236;2.13e-09;13!CL:0000094;7.76e-08;8!CL:0000791;1.96e-07;18!CL:0000789;1.96e-07;18!CL:0002419;1.96e-07;18!CL:0000084;3.61e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.21e-89,168;CL:0002032,3.40e-86,161;CL:0000837,3.40e-86,161;CL:0000988,2.00e-84,177;CL:0000738,4.11e-72,136;CL:0002031,6.45e-63,120;CL:0000763,4.19e-62,108;CL:0000049,4.19e-62,108;CL:0002087,3.45e-59,115;CL:0000766,2.91e-47,72;CL:0000557,5.12e-42,67;CL:0000839,4.02e-41,66;CL:0002009,9.18e-38,61;CL:0002194,8.08e-37,59;CL:0000576,8.08e-37,59;CL:0000040,8.08e-37,59;CL:0000559,8.08e-37,59;CL:0000473,4.69e-33,48;CL:0000234,4.69e-33,48;CL:0000860,1.97e-28,42;CL:0002057,1.97e-28,42;CL:0000542,7.60e-20,53;CL:0000051,7.60e-20,53;CL:0000838,1.59e-19,52;CL:0000134,1.10e-13,354;CL:0000945,1.53e-13,24;CL:0000826,1.53e-13,24;CL:0002320,1.68e-12,361;CL:0000236,9.44e-10,14;CL:0000219,1.40e-08,386;CL:0000094,7.87e-08,8;CL:0000791,1.98e-07,18;CL:0000789,1.98e-07,18;CL:0002420,1.98e-07,18;CL:0002419,1.98e-07,18;CL:0000790,1.98e-07,18;CL:0000084,3.61e-07,25;CL:0000827,3.61e-07,25;CL:0002393,7.24e-07,9;CL:0002397,7.24e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-20;42!CL:0000049;4.19e-17;108!CL:0000051;4.87e-12;53!CL:0000790;1.96e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!3.14e-13!51;DOID:0060083!3.14e-13!51;DOID:8692!2.00e-12!31;DOID:1240!3.00e-12!39 | |ontology_enrichment_disease=DOID:2531!3.14e-13!51;DOID:0060083!3.14e-13!51;DOID:8692!2.00e-12!31;DOID:1240!3.00e-12!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;5.76e-13;31!DOID:1240;1.62e-10;39!DOID:2531;3.36e-09;51!DOID:0060083;3.36e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.91e-15,51;DOID:0060083,8.91e-15,51;DOID:8692,1.22e-13,31;DOID:1240,1.37e-13,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.86e-41!102;UBERON:0003061!1.86e-41!102;UBERON:0002193!1.33e-37!112;UBERON:0002371!8.12e-30!80;UBERON:0001474!1.62e-25!86;UBERON:0007023!4.57e-25!115;UBERON:0002405!6.51e-22!115;UBERON:0004765!2.25e-18!101;UBERON:0001434!2.25e-18!101;UBERON:0000178!8.78e-10!15;UBERON:0000179!8.78e-10!15;UBERON:0000463!8.78e-10!15;UBERON:0002384!4.98e-08!375;UBERON:0003081!9.75e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!1.86e-41!102;UBERON:0003061!1.86e-41!102;UBERON:0002193!1.33e-37!112;UBERON:0002371!8.12e-30!80;UBERON:0001474!1.62e-25!86;UBERON:0007023!4.57e-25!115;UBERON:0002405!6.51e-22!115;UBERON:0004765!2.25e-18!101;UBERON:0001434!2.25e-18!101;UBERON:0000178!8.78e-10!15;UBERON:0000179!8.78e-10!15;UBERON:0000463!8.78e-10!15;UBERON:0002384!4.98e-08!375;UBERON:0003081!9.75e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.92e-10;15!UBERON:0000179;1.92e-10;15!UBERON:0000463;1.92e-10;15!UBERON:0002390;7.60e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.47e-49,98;UBERON:0003061,3.47e-49,98;UBERON:0002193,1.94e-43,108;UBERON:0002371,2.37e-36,76;UBERON:0002405,8.26e-34,93;UBERON:0001474,1.81e-31,82;UBERON:0004765,4.61e-26,90;UBERON:0007023,1.45e-23,114;UBERON:0001434,2.78e-21,100;UBERON:0003081,1.05e-11,203;UBERON:0002384,2.54e-11,371;UBERON:0000178,1.88e-10,15;UBERON:0000179,1.88e-10,15;UBERON:0000463,1.88e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,42.7915072188527,38.7514782203744,36.5218025295472,121.156197269462,40.6859161983045,54.8049076538909,0,0,0,34.0855682553327,4.12290774213522,54.9032821556164,85.3152929139091,65.9791232176766,52.9506524546678,158.532155761866,120.48844375906,127.242330411288,74.5892964939167,52.9026321164333,53.3684934613196,60.6639786323837,41.9391245782262,52.0306703103774,132.913885252834,114.759996525037,144.490642461926,67.2254077436406,54.8661981046252,54.1705946377367,68.8966962725933,45.5753270596602,59.7764468623925,65.1958690750022,61.2974441715339,62.015701202507,170.533122196532,145.807933721413,129.146099411406,50.206198282745,38.5821952789975,39.2378016867212,126.880575954655,118.898105399806,122.928886103096,55.6967542422699,64.4485862978238,54.747993027273,86.8259226742081,54.8519093909812,65.2038387531049,131.873812965985,119.390629808998,81.4878724554196,56.4325232607672,40.7779188258135,41.6474270583365,93.278009564501,74.820989742912,68.4922125474937,75.5312493942718,61.6609820035459,79.8905891536732,79.9864296069683,68.6918703265462,60.905787694711,56.9620073689811,55.8118913062834,58.1553845747714,31.388479526966,43.1949899031126,11.0157471263747,9.82526906872912,11.308082444973,109.005594994722,31.6144598634583,29.8272117612882,13.6378709885538,134.249600546634,80.1328068331557,70.4477784775915,72.8462393527892,81.2098967060781,88.0501782980376,112.311088844311,124.910208039203,130.701191666509,0.296573126324121,0,2.09071047609954,87.3615032198235,13.7959377696692,11.6833331464094,16.4462799812677,13.6983128159362,7.81300144627702,7.60361635558699,15.0575119077773,10.1109422811991,13.742379920758,18.9421801635213,11.4957919568947,4.83856183739358,4.01160293675261,3.33096128930438,0,0,0,0,0,0,0,0,0,0,0.087834785693126,6.67993285038334,0,0,27.5865284606481,26.4677200694886,28.8518774325937,10.7320780937404,17.1598473234038,7.80060752792086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,312.31958932347,430.436093204641,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86261773342101,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0,0,0,123.847154061961,51.4809383306323,78.3286225261598,0,0,0,0,0,0,29.5597942737566,110.588833120612,122.530916284596,93.1014899073571,130.155948862598,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,145.948536769429,136.111671778106,132.82538187431,0,0,0,0,0,0,28.5817117183495,8.47232268868287,3.45004119775228,8.59898343074314,0,0,0,2.01019518401218,0,196.988847298109,257.278854915461,285.532288757428,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,34.3234923363993,43.7899827661792,29.0298957225369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,8.77039506583738,9.41167623689642,0,0,0,15.4561517471583,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0.165284915360978,0.384380134730212,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54911749049875,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,0,15.0630081242847,0,1.68471475667626,1.33029046061003,0,149.69704472349,129.988325214204,165.197684280507,116.733569974317,160.431286503616,178.97863388919,136.087922184005,147.521282790734,0,0.962479855263359,0,9.29015875628594,59.0061081073659,0,0,81.2288041731564,226.742358236722,175.477400078099,68.8198513382058,354.646835957298,32.4093244227133,53.4278444586009,142.861651941338,149.146056243213,69.3740484447982,92.4242658934998,80.0590926857814,58.7394139532358,48.2367999964279,57.7084358362433,65.7385618344919,85.9707619768977,0,3.69262196843137,172.009811510725,162.206048414938,143.806745189607,0,14.0647852101018,0,20.9513562441659,0,0.23874448473769,0.890894042497916,0,3.97659059106519,7.59614848616769,0.111308705022906,22.9077385175196,0,4.18420775327246,29.5623789618328,0,0,22.2783497884536,0.311039587661807,0,0,99.75661219424,6.90503839458535,81.4242513979595,0,2.90799823828566,2.69027484669369,0,0,0,10.8749936315219,0,0,0.236387681767936,0,0,0,0.885741385813839,4.94445398364173,1.52581736317083,1.54810963903714,0.886642856860642,2.63262476584767,0,0,5.07871706125061,0,0,0.897576444097721,0,0.957003479195758,0.824378340616761,4.26427820814908,0,43.6405112778169,52.3566797985493,0,0,0,0,38.1447789552909,0,0.163232808159148,0,0,12.9384051040206,9.19958670834727,4.888241159469,5.93042257361244,4.2011739241811,4.28129992972367,4.17887024480198,4.01288823649394,3.04543779442941,7.48064635784231,0,0,0.789168805698781,2.41981432097328,6.42752799424029,23.8845270995684,0,0,0,0,0,0,0,0,0,0.293977192243133,0,9.78469342155369,0,0,0,0,5.72235197281675,0,2.48578814858586,0,0,2.15256706249988,0,0,7.68430781061669,0,0,0,0,0,0,0,0,0.104602846312333,0,0,3.00210144354895,8.07741735462759,40.8789081814311,0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| ||
|short_description=p1@NCF4 | |short_description=p1@NCF4 | ||
}} | }} |
Latest revision as of 03:13, 20 September 2015
Short description: | p1@NCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCF4_5end |
Coexpression cluster: | C2643_Eosinophils_acute_Neutrophils_CD14_Whole_Monocytederived_Macrophage |
Association with transcript: | 0bp_to_ENST00000248899, ENST00000397147, ENST00000447071, NM_000631, NM_013416, uc003apy.3, uc003apz.3_5end |
EntrezGene: | NCF4 |
HGNC: | 7662 |
UniProt: | Q15080A8K4F9B0QY04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.47e-49 | 98 |
blood island | 3.47e-49 | 98 |
hemolymphoid system | 1.94e-43 | 108 |
bone marrow | 2.37e-36 | 76 |
immune system | 8.26e-34 | 93 |
bone element | 1.81e-31 | 82 |
skeletal element | 4.61e-26 | 90 |
adult organism | 1.45e-23 | 114 |
skeletal system | 2.78e-21 | 100 |
lateral plate mesoderm | 1.05e-11 | 203 |
connective tissue | 2.54e-11 | 371 |
blood | 1.88e-10 | 15 |
haemolymphatic fluid | 1.88e-10 | 15 |
organism substance | 1.88e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.91e-15 | 51 |
immune system cancer | 8.91e-15 | 51 |
myeloid leukemia | 1.22e-13 | 31 |
leukemia | 1.37e-13 | 39 |