FFCP PHASE1:Hg19::chr11:122735321..122735348,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56253 | |EntrezGene=56253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24313 | |HGNC=24313 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000533416_5end | |association_with_transcript=22bp_to_ENST00000533416_5end | ||
|cluster_id=chr11:122735321..122735348,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_1_at_CRTAM_5end | |description=CAGE_peak_1_at_CRTAM_5end | ||
|id=chr11:122735321..122735348,+ | |id=chr11:122735321..122735348,+ | ||
|ontology_enrichment_celltype=CL:0002009!2.10e-72!65;CL:0002194!7.46e-70!63;CL:0000576!7.46e-70!63;CL:0000040!7.46e-70!63;CL:0000559!7.46e-70!63;CL:0000557!1.81e-64!71;CL:0000766!3.49e-61!76;CL:0000839!8.75e-61!70;CL:0002057!7.35e-60!42;CL:0000860!9.56e-55!45;CL:0000763!2.71e-48!112;CL:0000049!2.71e-48!112;CL:0000738!5.67e-44!140;CL:0002087!2.80e-41!119;CL:0002031!2.51e-37!124;CL:0000037!1.39e-36!172;CL:0000566!1.39e-36!172;CL:0002032!3.63e-33!165;CL:0000837!3.63e-33!165;CL:0000988!4.12e-33!182;CL:0002393!8.87e-13!9;CL:0002397!8.87e-13!9;CL:0000990!1.81e-11!8;CL:0000451!4.96e-11!10;CL:0000840!3.23e-08!5;CL:0001029!3.23e-08!5;CL:0000134!2.48e-07!358;CL:0000453!3.46e-07!5;CL:0002320!8.30e-07!365 | |ontology_enrichment_celltype=CL:0002009!2.10e-72!65;CL:0002194!7.46e-70!63;CL:0000576!7.46e-70!63;CL:0000040!7.46e-70!63;CL:0000559!7.46e-70!63;CL:0000557!1.81e-64!71;CL:0000766!3.49e-61!76;CL:0000839!8.75e-61!70;CL:0002057!7.35e-60!42;CL:0000860!9.56e-55!45;CL:0000763!2.71e-48!112;CL:0000049!2.71e-48!112;CL:0000738!5.67e-44!140;CL:0002087!2.80e-41!119;CL:0002031!2.51e-37!124;CL:0000037!1.39e-36!172;CL:0000566!1.39e-36!172;CL:0002032!3.63e-33!165;CL:0000837!3.63e-33!165;CL:0000988!4.12e-33!182;CL:0002393!8.87e-13!9;CL:0002397!8.87e-13!9;CL:0000990!1.81e-11!8;CL:0000451!4.96e-11!10;CL:0000840!3.23e-08!5;CL:0001029!3.23e-08!5;CL:0000134!2.48e-07!358;CL:0000453!3.46e-07!5;CL:0002320!8.30e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.40e-75;33!CL:0002057;1.40e-75;33!CL:0000473;1.24e-74;39!CL:0000234;1.24e-74;39!CL:0000576;6.07e-65;48!CL:0000766;7.77e-46;69!CL:0000763;6.01e-21;100!CL:0002087;1.62e-16;104!CL:0000738;2.72e-16;136!CL:0000990;2.78e-15;8!CL:0000235;2.97e-15;6!CL:0002393;1.71e-14;6!CL:0002397;1.71e-14;6!CL:0000451;2.96e-12;10!CL:0000453;2.30e-11;5!CL:0000988;7.83e-10;177!CL:0000840;1.04e-09;5!CL:0000875;2.81e-08;3!CL:0002396;2.81e-08;3!CL:0000767;7.16e-08;3!CL:0002619;7.89e-08;3!CL:0000219;2.72e-07;193!CL:0000226;3.69e-07;3!CL:0000842;3.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.01e-121,61;CL:0000473,2.42e-118,48;CL:0000234,2.42e-118,48;CL:0002194,5.81e-117,59;CL:0000576,5.81e-117,59;CL:0000040,5.81e-117,59;CL:0000559,5.81e-117,59;CL:0000557,2.37e-109,67;CL:0000766,1.04e-104,72;CL:0000860,9.50e-104,42;CL:0002057,9.50e-104,42;CL:0000839,3.63e-103,66;CL:0000763,1.39e-80,108;CL:0000049,1.39e-80,108;CL:0000738,2.50e-67,136;CL:0002087,4.30e-62,115;CL:0002031,7.91e-57,120;CL:0000037,3.26e-53,168;CL:0002032,1.23e-50,161;CL:0000837,1.23e-50,161;CL:0000988,1.13e-49,177;CL:0002393,4.11e-21,9;CL:0002397,4.11e-21,9;CL:0000134,1.33e-16,354;CL:0002320,5.80e-16,361;CL:0000990,3.05e-15,8;CL:0000235,3.28e-15,6;CL:0000219,1.01e-13,386;CL:0000451,3.19e-12,10;CL:0000048,1.29e-11,427;CL:0000453,2.25e-11,5;CL:0000723,3.14e-11,433;CL:0000034,9.87e-11,441;CL:0000840,1.16e-09,5;CL:0001029,1.16e-09,5;CL:0000875,2.70e-08,3;CL:0002396,2.70e-08,3;CL:0002619,7.25e-08,3;CL:0000767,7.61e-08,3;CL:0000226,2.61e-07,3;CL:0000842,2.61e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.36e-74;42!CL:0000049;2.68e-22;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.15e-64!102;UBERON:0003061!1.15e-64!102;UBERON:0002193!2.66e-58!112;UBERON:0002371!7.67e-57!80;UBERON:0001474!2.32e-51!86;UBERON:0004765!6.34e-42!101;UBERON:0001434!6.34e-42!101;UBERON:0002405!3.68e-41!115;UBERON:0003081!7.31e-23!216;UBERON:0002204!1.86e-20!167;UBERON:0007023!3.01e-15!115;UBERON:0000178!3.07e-07!15;UBERON:0000179!3.07e-07!15;UBERON:0000463!3.07e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!1.15e-64!102;UBERON:0003061!1.15e-64!102;UBERON:0002193!2.66e-58!112;UBERON:0002371!7.67e-57!80;UBERON:0001474!2.32e-51!86;UBERON:0004765!6.34e-42!101;UBERON:0001434!6.34e-42!101;UBERON:0002405!3.68e-41!115;UBERON:0003081!7.31e-23!216;UBERON:0002204!1.86e-20!167;UBERON:0007023!3.01e-15!115;UBERON:0000178!3.07e-07!15;UBERON:0000179!3.07e-07!15;UBERON:0000463!3.07e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.59e-10;15!UBERON:0000179;2.59e-10;15!UBERON:0000463;2.59e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.29e-96,98;UBERON:0003061,6.29e-96,98;UBERON:0002371,9.04e-95,76;UBERON:0001474,8.31e-87,82;UBERON:0002193,1.31e-85,108;UBERON:0004765,7.98e-78,90;UBERON:0002405,7.52e-75,93;UBERON:0001434,1.34e-68,100;UBERON:0003081,1.81e-39,203;UBERON:0002204,1.21e-36,167;UBERON:0000926,1.25e-19,315;UBERON:0004120,1.25e-19,315;UBERON:0006603,1.25e-19,315;UBERON:0002384,7.33e-16,371;UBERON:0000178,2.34e-10,15;UBERON:0000179,2.34e-10,15;UBERON:0000463,2.34e-10,15 | |||
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|short_description=p1@CRTAM | |short_description=p1@CRTAM | ||
}} | }} |
Latest revision as of 08:49, 16 September 2015
Short description: | p1@CRTAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRTAM_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 22bp_to_ENST00000533416_5end |
EntrezGene: | CRTAM |
HGNC: | 24313 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.29e-96 | 98 |
blood island | 6.29e-96 | 98 |
bone marrow | 9.04e-95 | 76 |
bone element | 8.31e-87 | 82 |
hemolymphoid system | 1.31e-85 | 108 |
skeletal element | 7.98e-78 | 90 |
immune system | 7.52e-75 | 93 |
skeletal system | 1.34e-68 | 100 |
lateral plate mesoderm | 1.81e-39 | 203 |
musculoskeletal system | 1.21e-36 | 167 |
mesoderm | 1.25e-19 | 315 |
mesoderm-derived structure | 1.25e-19 | 315 |
presumptive mesoderm | 1.25e-19 | 315 |
connective tissue | 7.33e-16 | 371 |
blood | 2.34e-10 | 15 |
haemolymphatic fluid | 2.34e-10 | 15 |
organism substance | 2.34e-10 | 15 |