FFCP PHASE1:Hg19::chr19:51518137..51518155,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:51518137..51518155,- | |||
|description=CAGE_peak_at_chr19:51518137..51518155,- | |description=CAGE_peak_at_chr19:51518137..51518155,- | ||
|id=chr19:51518137..51518155,- | |id=chr19:51518137..51518155,- | ||
|ontology_enrichment_celltype=CL:0000066!1.02e-20!254;CL:0002076!8.23e-20!43;CL:0002251!1.92e-16!21;CL:0000076!3.98e-16!62;CL:0000223!6.21e-14!59;CL:0002159!8.75e-10!13;CL:0000622!2.44e-07!5;CL:0002621!3.82e-07!3;CL:0002077!8.14e-07!33 | |ontology_enrichment_celltype=CL:0000066!1.02e-20!254;CL:0002076!8.23e-20!43;CL:0002251!1.92e-16!21;CL:0000076!3.98e-16!62;CL:0000223!6.21e-14!59;CL:0002159!8.75e-10!13;CL:0000622!2.44e-07!5;CL:0002621!3.82e-07!3;CL:0002077!8.14e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000575;9.57e-12;2!CL:0002159;8.65e-10;14!CL:0002231;1.43e-08;3!CL:0002621;2.51e-08;3!CL:0002076;2.16e-07;42!CL:0002379;5.06e-07;1!CL:0002251;7.89e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.19e-11,2;CL:0002076,2.00e-11,42;CL:0002159,8.74e-10,14;CL:0000066,1.67e-09,253;CL:0000076,1.01e-08,63;CL:0002231,1.66e-08,3;CL:0002621,3.50e-08,3;CL:0000223,8.58e-08,58;CL:0002077,3.27e-07,34;CL:0002379,4.51e-07,1;CL:0002251,8.31e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.06e-07;1!UBERON:0006242;5.06e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!2.61e-13!14;DOID:305!1.17e-08!106 | |ontology_enrichment_disease=DOID:1749!2.61e-13!14;DOID:305!1.17e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:299;1.50e-07;25!DOID:3151;5.06e-07;1!DOID:3620;5.06e-07;1!DOID:3565;5.06e-07;1!DOID:3149;5.06e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.35e-07,25;DOID:3620,4.51e-07,1;DOID:3565,4.51e-07,1;DOID:3151,5.69e-07,1;DOID:3149,5.69e-07,1;DOID:3111,9.51e-07,1;DOID:3603,9.51e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!1.35e-14!21;UBERON:0000165!8.63e-12!28;UBERON:0000930!8.63e-12!28;UBERON:0000161!2.06e-10!35;UBERON:0003729!2.84e-10!5;UBERON:0000974!3.56e-09!10;UBERON:0001004!4.31e-09!72;UBERON:0003343!1.27e-08!4;UBERON:0004785!1.27e-08!4;UBERON:0001444!1.31e-08!48;UBERON:0002294!1.04e-07!7;UBERON:0001173!1.04e-07!7;UBERON:0004912!1.04e-07!7;UBERON:0000344!1.14e-07!12;UBERON:0001723!1.15e-07!3;UBERON:0001033!1.15e-07!3;UBERON:0010056!1.15e-07!3;UBERON:0004119!1.79e-07!169;UBERON:0000925!1.79e-07!169;UBERON:0006595!1.79e-07!169;UBERON:0001949!3.82e-07!3;UBERON:0002110!5.34e-07!3;UBERON:0006242!5.34e-07!3;UBERON:0001007!5.46e-07!155;UBERON:0001555!5.46e-07!155;UBERON:0007026!5.46e-07!155;UBERON:0003102!6.55e-07!95 | |ontology_enrichment_uberon=UBERON:0000166!1.35e-14!21;UBERON:0000165!8.63e-12!28;UBERON:0000930!8.63e-12!28;UBERON:0000161!2.06e-10!35;UBERON:0003729!2.84e-10!5;UBERON:0000974!3.56e-09!10;UBERON:0001004!4.31e-09!72;UBERON:0003343!1.27e-08!4;UBERON:0004785!1.27e-08!4;UBERON:0001444!1.31e-08!48;UBERON:0002294!1.04e-07!7;UBERON:0001173!1.04e-07!7;UBERON:0004912!1.04e-07!7;UBERON:0000344!1.14e-07!12;UBERON:0001723!1.15e-07!3;UBERON:0001033!1.15e-07!3;UBERON:0010056!1.15e-07!3;UBERON:0004119!1.79e-07!169;UBERON:0000925!1.79e-07!169;UBERON:0006595!1.79e-07!169;UBERON:0001949!3.82e-07!3;UBERON:0002110!5.34e-07!3;UBERON:0006242!5.34e-07!3;UBERON:0001007!5.46e-07!155;UBERON:0001555!5.46e-07!155;UBERON:0007026!5.46e-07!155;UBERON:0003102!6.55e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;4.87e-09;28!UBERON:0001723;7.07e-09;3!UBERON:0001033;7.07e-09;3!UBERON:0001949;2.51e-08;3!UBERON:0004913;2.99e-07;1!UBERON:0003703;2.99e-07;1!UBERON:0001174;2.99e-07;1!UBERON:0004914;2.99e-07;1!UBERON:0000161;3.98e-07;19!UBERON:0000166;3.98e-07;19!UBERON:0007029;5.06e-07;1!UBERON:0000997;5.06e-07;1!UBERON:0005056;5.06e-07;1!UBERON:0004176;5.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,1.11e-11,22;UBERON:0000161,3.65e-11,36;UBERON:0003102,4.68e-11,99;UBERON:0001723,6.94e-09,3;UBERON:0001033,6.94e-09,3;UBERON:0010056,6.94e-09,3;UBERON:0000165,1.21e-08,29;UBERON:0000930,1.21e-08,29;UBERON:0001949,3.50e-08,3;UBERON:0001444,1.06e-07,49;UBERON:0004913,2.99e-07,1;UBERON:0003703,2.99e-07,1;UBERON:0001174,2.99e-07,1;UBERON:0004914,2.99e-07,1;UBERON:0000153,3.11e-07,62;UBERON:0007811,3.11e-07,62;UBERON:0000997,4.01e-07,1;UBERON:0005056,4.01e-07,1;UBERON:0007029,5.06e-07,1 | |||
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| ||
|short_description=p@chr19:51518137..51518155,- | |short_description=p@chr19:51518137..51518155,- | ||
}} | }} |
Latest revision as of 16:36, 27 July 2015
Short description: | p@chr19:51518137..51518155, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51518137..51518155, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.19e-11 | 2 |
endo-epithelial cell | 2.00e-11 | 42 |
general ecto-epithelial cell | 8.74e-10 | 14 |
epithelial cell | 1.67e-09 | 253 |
squamous epithelial cell | 1.01e-08 | 63 |
epithelial cell of prostate | 1.66e-08 | 3 |
gingival epithelial cell | 3.50e-08 | 3 |
endodermal cell | 8.58e-08 | 58 |
ecto-epithelial cell | 3.27e-07 | 34 |
meningothelial cell | 4.51e-07 | 1 |
epithelial cell of alimentary canal | 8.31e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
oral opening | 1.11e-11 | 22 |
orifice | 3.65e-11 | 36 |
surface structure | 4.68e-11 | 99 |
tongue | 6.94e-09 | 3 |
gustatory system | 6.94e-09 | 3 |
future tongue | 6.94e-09 | 3 |
mouth | 1.21e-08 | 29 |
stomodeum | 1.21e-08 | 29 |
gingival epithelium | 3.50e-08 | 3 |
subdivision of head | 1.06e-07 | 49 |
hepatopancreatic ampulla | 2.99e-07 | 1 |
extrahepatic bile duct | 2.99e-07 | 1 |
common bile duct | 2.99e-07 | 1 |
duodenal papilla | 2.99e-07 | 1 |
anterior region of body | 3.11e-07 | 62 |
craniocervical region | 3.11e-07 | 62 |
mammalian vulva | 4.01e-07 | 1 |
external female genitalia | 4.01e-07 | 1 |
surface | 5.06e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.35e-07 | 25 |
central nervous system cancer | 4.51e-07 | 1 |
meningioma | 4.51e-07 | 1 |
skin squamous cell carcinoma | 5.69e-07 | 1 |
keratoacanthoma | 5.69e-07 | 1 |
cystadenocarcinoma | 9.51e-07 | 1 |
mucinous cystadenocarcinoma | 9.51e-07 | 1 |