FFCP PHASE1:Hg19::chr1:207669574..207669601,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1378 | |EntrezGene=1378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2334 | |HGNC=2334 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000530487_5end | |association_with_transcript=0bp_to_ENST00000530487_5end | ||
|cluster_id=chr1:207669574..207669601,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_CR1_5end | |description=CAGE_peak_1_at_CR1_5end | ||
|id=chr1:207669574..207669601,+ | |id=chr1:207669574..207669601,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.29e-49!140;CL:0002087!1.89e-46!119;CL:0000037!2.30e-45!172;CL:0000566!2.30e-45!172;CL:0002032!2.88e-45!165;CL:0000837!2.88e-45!165;CL:0002031!3.16e-45!124;CL:0000766!3.18e-45!76;CL:0000988!1.28e-40!182;CL:0000839!2.05e-38!70;CL:0002194!2.18e-37!63;CL:0000576!2.18e-37!63;CL:0000040!2.18e-37!63;CL:0000559!2.18e-37!63;CL:0002009!1.47e-35!65;CL:0002057!2.79e-35!42;CL:0000763!1.10e-34!112;CL:0000049!1.10e-34!112;CL:0000557!2.50e-34!71;CL:0000860!9.59e-32!45;CL:0000094!4.95e-10!8;CL:0000838!5.48e-10!52;CL:0000236!7.78e-10!14;CL:0000542!1.30e-09!53;CL:0000051!1.30e-09!53;CL:0002393!8.12e-08!9;CL:0002397!8.12e-08!9;CL:0000791!5.20e-07!18;CL:0000789!5.20e-07!18;CL:0002420!5.20e-07!18;CL:0002419!5.20e-07!18;CL:0000790!5.20e-07!18 | |ontology_enrichment_celltype=CL:0000738!2.29e-49!140;CL:0002087!1.89e-46!119;CL:0000037!2.30e-45!172;CL:0000566!2.30e-45!172;CL:0002032!2.88e-45!165;CL:0000837!2.88e-45!165;CL:0002031!3.16e-45!124;CL:0000766!3.18e-45!76;CL:0000988!1.28e-40!182;CL:0000839!2.05e-38!70;CL:0002194!2.18e-37!63;CL:0000576!2.18e-37!63;CL:0000040!2.18e-37!63;CL:0000559!2.18e-37!63;CL:0002009!1.47e-35!65;CL:0002057!2.79e-35!42;CL:0000763!1.10e-34!112;CL:0000049!1.10e-34!112;CL:0000557!2.50e-34!71;CL:0000860!9.59e-32!45;CL:0000094!4.95e-10!8;CL:0000838!5.48e-10!52;CL:0000236!7.78e-10!14;CL:0000542!1.30e-09!53;CL:0000051!1.30e-09!53;CL:0002393!8.12e-08!9;CL:0002397!8.12e-08!9;CL:0000791!5.20e-07!18;CL:0000789!5.20e-07!18;CL:0002420!5.20e-07!18;CL:0002419!5.20e-07!18;CL:0000790!5.20e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.52e-35;39!CL:0000234;1.52e-35;39!CL:0000860;6.97e-35;33!CL:0002057;6.97e-35;33!CL:0000576;1.69e-30;48!CL:0000766;3.92e-25;69!CL:0000763;2.95e-15;100!CL:0002087;7.95e-15;104!CL:0000094;5.60e-13;8!CL:0000738;1.34e-12;136!CL:0000236;3.56e-12;13!CL:0000235;5.90e-09;6!CL:0000081;8.03e-09;11!CL:0000988;1.40e-08;177!CL:0000945;2.36e-08;24!CL:0002393;8.12e-08;6!CL:0002397;8.12e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.52e-62,72;CL:0002194,8.43e-55,59;CL:0000576,8.43e-55,59;CL:0000040,8.43e-55,59;CL:0000559,8.43e-55,59;CL:0000473,8.63e-55,48;CL:0000234,8.63e-55,48;CL:0000738,1.48e-54,136;CL:0000839,3.65e-53,66;CL:0002009,2.12e-52,61;CL:0002087,3.25e-51,115;CL:0000037,6.99e-51,168;CL:0002032,3.97e-50,161;CL:0000837,3.97e-50,161;CL:0000763,2.38e-48,108;CL:0000049,2.38e-48,108;CL:0002031,5.09e-48,120;CL:0000557,6.62e-48,67;CL:0000860,4.96e-47,42;CL:0002057,4.96e-47,42;CL:0000988,9.30e-47,177;CL:0000236,4.36e-13,14;CL:0000094,5.83e-13,8;CL:0000134,4.98e-11,354;CL:0002320,2.45e-10,361;CL:0002393,5.52e-10,9;CL:0002397,5.52e-10,9;CL:0000235,5.64e-09,6;CL:0000081,8.26e-09,11;CL:0000945,2.31e-08,24;CL:0000826,2.31e-08,24;CL:0000219,5.67e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.23e-34;42!CL:0000049;4.33e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-38!102;UBERON:0003061!1.27e-38!102;UBERON:0002193!2.09e-35!112;UBERON:0002371!5.94e-28!80;UBERON:0007023!1.80e-26!115;UBERON:0001474!1.73e-24!86;UBERON:0002405!8.96e-24!115;UBERON:0004765!8.88e-18!101;UBERON:0001434!8.88e-18!101;UBERON:0003081!6.24e-11!216;UBERON:0000178!2.07e-08!15;UBERON:0000179!2.07e-08!15;UBERON:0000463!2.07e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!1.27e-38!102;UBERON:0003061!1.27e-38!102;UBERON:0002193!2.09e-35!112;UBERON:0002371!5.94e-28!80;UBERON:0007023!1.80e-26!115;UBERON:0001474!1.73e-24!86;UBERON:0002405!8.96e-24!115;UBERON:0004765!8.88e-18!101;UBERON:0001434!8.88e-18!101;UBERON:0003081!6.24e-11!216;UBERON:0000178!2.07e-08!15;UBERON:0000179!2.07e-08!15;UBERON:0000463!2.07e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.41e-11;15!UBERON:0000179;2.41e-11;15!UBERON:0000463;2.41e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.21e-52,98;UBERON:0003061,1.21e-52,98;UBERON:0002193,3.11e-49,108;UBERON:0002371,4.94e-40,76;UBERON:0002405,1.46e-38,93;UBERON:0001474,9.30e-36,82;UBERON:0004765,5.78e-31,90;UBERON:0001434,4.38e-26,100;UBERON:0003081,4.14e-19,203;UBERON:0007023,1.22e-12,114;UBERON:0002204,1.88e-11,167;UBERON:0000178,2.66e-11,15;UBERON:0000179,2.66e-11,15;UBERON:0000463,2.66e-11,15;UBERON:0002384,7.41e-10,371;UBERON:0000926,5.41e-09,315;UBERON:0004120,5.41e-09,315;UBERON:0006603,5.41e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,35.4027849164014,12.2825407391108,15.3267962082915,0,0,0,0,0,0,12.1878989877013,14.6397446653203,13.237663113667,11.1957737119962,19.1097262951198,24.9848300605161,9.59628375945127,7.17964293008738,6.0646015296954,10.2268776238501,7.81218987241469,4.33588919253145,18.7000055009398,11.7833925003386,7.56743135643473,14.479318590938,2.5819387343353,4.06279459783025,10.1650863353007,6.5497476013883,4.71919317334678,10.4068523406107,9.30694178520671,3.19668562899521,18.8015241106428,23.1377842841093,15.344091019177,10.7377418292576,7.37600792098482,8.09668923694247,14.5724225848911,13.037072960505,8.68755378820467,9.08099253950053,6.2607198117886,5.37986058649504,2.32380814943136,2.33864729961548,3.77385561915077,8.08766144254765,5.10601435661121,13.8224004559489,2.28010194992999,1.59133341759272,2.19196984517561,17.5996244461323,13.1073266702912,6.22656477704488,12.3751764544287,10.4102956629363,10.9202963591352,10.5767179645578,20.0351288452426,10.8150464130795,14.6809297342735,11.4681968437569,0,0.560508562981536,2.63384084775077,0.786839080455332,0.786021525498329,0.411202997999018,0,0.32592226663359,0,0,0,0.294605907474837,0.664601683750863,0,0,0,0.164437904603676,0,0,2.52087157375503,0,0,0.679856056185397,0.766440987203842,0.68725489096526,1.77113784413652,1.91139248594458,0,0.950452044448374,1.05402583354441,1.15187950038977,3.74792179657038,3.78843603270427,0.821127996921047,1.20964045934839,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,14.6046327144608,12.363211348248,12.3650903282545,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.3943628000647,54.2892369807656,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9313088667105,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9284455174288,8.19014927987332,17.0925836632037,0,0,0,0,0,0,0,0.088048434013226,2.48793738648926,0.576479813667846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,17.0767411086923,8.43335757932127,0,0,0,0,0,0,0,0.591092280605782,0,0.77005821767849,0,0,0,0.167516265334349,0,82.3907726341901,80.7735939850867,201.405939529913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,7.33428282783297,4.16237475433433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3585364227321,5.75157992254781,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,2.54188262097304,0,0,0,0,10.1489521846434,9.1756464857085,20.5072987382699,15.7232971802141,9.04997000789627,7.78167973431261,12.9607544937148,20.621254583651,0,0,0,0,0,1.13826949357463,0,0.199579371432817,0,0,0,0,0,0.626719583092093,2.50634477090067,0,0,0,0,1.03051603426729,0,0,0,0,1.9488432172667,0,0,0,18.3283106614204,0,4.54175355742871,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,2.59022384726391,15.4718992697443,0,0,1.23084805461069,0,0,0,0,2.17015492401254,4.7896618469388,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,31.4140078791296,0,0,0,0,10.0130044757639,0,0,0,0,1.99052386215701,1.85760885457012,0.611030144933625,0,0,0,0.269604531922708,4.01288823649394,0,0,0,0,0,3.62972148145992,0,10.362599059072,0,0,0,0,0,0,0,0,0,0,0,6.98906672968121,0,0,0,0,1.55182426381471,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0.558564802544508,0,1.43574604915363,1.59743200399193,0.858452096273142,4.9097720637212,0.739018197353989,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,1.97014268247995,4.98318587282482,0,0,0,12.1498205483472,3.31045985182716,0,0,0,0,0,7.96297451268588,0,0,3.81035807563014,10.6005511129777,0.258565912723101,0.39669780522807,0,0,4.69864615297857,0.314408610199332,4.14239055347196,47.6319380939473,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,2.29363678276028,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,1.24415452006595,0,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0.504143392443436,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.95546853708069,0,1.56302802246618,0,0,0,0.135075169236789,0.781078098613847,0.413373593002368,0,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0.336283722218824,1.21393120847326,0.227662191351298,4.96733272910777,3.11131766400604,0,0,0,0,0,1.80534113556182,0.314231179832004,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615976841137482,4.6392577253528,0.971421986118279,0,0,0,0,0,0,1.69783147837478,0.218559560503957,0,1.47088993052343,0,0.785233868459781,0,0.8453114551668,0,39.8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| ||
|short_description=p1@CR1 | |short_description=p1@CR1 | ||
}} | }} |
Latest revision as of 08:50, 20 September 2015
Short description: | p1@CR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CR1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000530487_5end |
EntrezGene: | CR1 |
HGNC: | 2334 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.21e-52 | 98 |
blood island | 1.21e-52 | 98 |
hemolymphoid system | 3.11e-49 | 108 |
bone marrow | 4.94e-40 | 76 |
immune system | 1.46e-38 | 93 |
bone element | 9.30e-36 | 82 |
skeletal element | 5.78e-31 | 90 |
skeletal system | 4.38e-26 | 100 |
lateral plate mesoderm | 4.14e-19 | 203 |
adult organism | 1.22e-12 | 114 |
musculoskeletal system | 1.88e-11 | 167 |
blood | 2.66e-11 | 15 |
haemolymphatic fluid | 2.66e-11 | 15 |
organism substance | 2.66e-11 | 15 |
connective tissue | 7.41e-10 | 371 |
mesoderm | 5.41e-09 | 315 |
mesoderm-derived structure | 5.41e-09 | 315 |
presumptive mesoderm | 5.41e-09 | 315 |