FFCP PHASE1:Hg19::chr1:177001748..177001753,-: Difference between revisions
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|id=chr1:177001748..177001753,-
|short_description=p16@ASTN1
|description=CAGE_peak_16_at_ASTN1_5end
|association_with_transcript=-62bp_to_ENST00000473640_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=460 | |EntrezGene=460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=773 | |HGNC=773 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-62bp_to_ENST00000473640_5end | |||
|cluster_id=chr1:177001748..177001753,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_16_at_ASTN1_5end | |||
|id=chr1:177001748..177001753,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p16@ASTN1 | |||
}} | }} |
Latest revision as of 20:33, 18 September 2015
Short description: | p16@ASTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ASTN1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -62bp_to_ENST00000473640_5end |
EntrezGene: | ASTN1 |
HGNC: | 773 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 4.76e-57 | 6 |
middle temporal gyrus | 2.74e-50 | 2 |
neocortex | 4.86e-20 | 20 |
regional part of cerebral cortex | 2.02e-18 | 22 |
gyrus | 7.67e-18 | 6 |
cerebral cortex | 1.86e-16 | 25 |
pallium | 1.86e-16 | 25 |
regional part of telencephalon | 2.96e-13 | 32 |
cerebral hemisphere | 2.96e-13 | 32 |
brain grey matter | 1.42e-12 | 34 |
gray matter | 1.42e-12 | 34 |
telencephalon | 1.42e-12 | 34 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |