FFCP PHASE1:Hg19::chr6:15246550..15246561,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3720 | |EntrezGene=3720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6196 | |HGNC=6196 | ||
|TSSclassifier=strong | |||
|UniProt=Q92833 | |UniProt=Q92833 | ||
|association_with_transcript=23bp_to_ENST00000341776,NM_004973,uc003nbj.2_5end | |association_with_transcript=23bp_to_ENST00000341776,NM_004973,uc003nbj.2_5end | ||
|cluster_id=chr6:15246550..15246561,+ | |||
|description=CAGE_peak_16_at_JARID2_5end | |description=CAGE_peak_16_at_JARID2_5end | ||
|id=chr6:15246550..15246561,+ | |id=chr6:15246550..15246561,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.11e-15!42;CL:0000766!4.15e-15!76;CL:0000557!4.89e-15!71;CL:0000860!1.12e-14!45;CL:0002009!1.11e-12!65;CL:0000839!2.15e-12!70;CL:0000763!2.28e-12!112;CL:0000049!2.28e-12!112;CL:0002194!1.53e-11!63;CL:0000576!1.53e-11!63;CL:0000040!1.53e-11!63;CL:0000559!1.53e-11!63;CL:0000738!5.26e-10!140;CL:0000037!1.59e-09!172;CL:0000566!1.59e-09!172;CL:0000988!9.00e-09!182;CL:0002032!3.11e-08!165;CL:0000837!3.11e-08!165;CL:0002031!7.45e-08!124 | |ontology_enrichment_celltype=CL:0002057!1.11e-15!42;CL:0000766!4.15e-15!76;CL:0000557!4.89e-15!71;CL:0000860!1.12e-14!45;CL:0002009!1.11e-12!65;CL:0000839!2.15e-12!70;CL:0000763!2.28e-12!112;CL:0000049!2.28e-12!112;CL:0002194!1.53e-11!63;CL:0000576!1.53e-11!63;CL:0000040!1.53e-11!63;CL:0000559!1.53e-11!63;CL:0000738!5.26e-10!140;CL:0000037!1.59e-09!172;CL:0000566!1.59e-09!172;CL:0000988!9.00e-09!182;CL:0002032!3.11e-08!165;CL:0000837!3.11e-08!165;CL:0002031!7.45e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.09e-15;33!CL:0002057;1.09e-15;33!CL:0000473;7.39e-14;39!CL:0000234;7.39e-14;39!CL:0002393;2.68e-12;6!CL:0002397;2.68e-12;6!CL:0000576;2.94e-12;48!CL:0000766;1.11e-10;69!CL:0002032;1.27e-08;1!CL:0000557;1.27e-08;1!CL:0000763;1.55e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.89e-25,67;CL:0000473,8.88e-24,48;CL:0000234,8.88e-24,48;CL:0000860,2.61e-23,42;CL:0002057,2.61e-23,42;CL:0000763,2.89e-21,108;CL:0000049,2.89e-21,108;CL:0002009,6.46e-21,61;CL:0000766,3.25e-20,72;CL:0000839,3.26e-19,66;CL:0002194,1.50e-18,59;CL:0000576,1.50e-18,59;CL:0000040,1.50e-18,59;CL:0000559,1.50e-18,59;CL:0000037,1.18e-15,168;CL:0002032,9.02e-15,161;CL:0000837,9.02e-15,161;CL:0000988,1.15e-14,177;CL:0000738,3.13e-14,136;CL:0002031,9.64e-13,120;CL:0002087,6.34e-10,115;CL:0002393,2.35e-08,9;CL:0002397,2.35e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.88e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.86e-15!80;UBERON:0001474!1.51e-14!86;UBERON:0002390!6.04e-14!102;UBERON:0003061!6.04e-14!102;UBERON:0004765!4.38e-12!101;UBERON:0001434!4.38e-12!101;UBERON:0002193!7.61e-12!112;UBERON:0002405!2.51e-09!115;UBERON:0002204!1.09e-07!167 | |ontology_enrichment_uberon=UBERON:0002371!2.86e-15!80;UBERON:0001474!1.51e-14!86;UBERON:0002390!6.04e-14!102;UBERON:0003061!6.04e-14!102;UBERON:0004765!4.38e-12!101;UBERON:0001434!4.38e-12!101;UBERON:0002193!7.61e-12!112;UBERON:0002405!2.51e-09!115;UBERON:0002204!1.09e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.27e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.09e-24,76;UBERON:0001474,1.13e-22,82;UBERON:0002390,6.29e-21,98;UBERON:0003061,6.29e-21,98;UBERON:0004765,2.12e-20,90;UBERON:0002405,1.20e-19,93;UBERON:0002193,1.06e-18,108;UBERON:0001434,4.60e-18,100;UBERON:0002204,6.32e-11,167;UBERON:0007195,1.91e-08,1;UBERON:0003081,2.07e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0.464448369948228,0,0.30120591877825,0.369754010166788,0,0,0.293600439334847,4.9859586767869,3.81034450193269,5.20826089718044,0,0.32389366601898,0.257575567634187,0.581592955118259,0.377875943688809,0.242584061187816,1.39457422143411,0.822335776043652,1.54853185447552,0.575384784644301,1.0246428261164,0,1.72372840368309,0,0,0.752969358170419,0.272906150057846,0.224723484445085,1.22433556948361,0.320929027076094,1.27867425159808,0.329851300186716,0.598390972864896,0,0.580418477257168,0.56738522469114,0,1.00499466102697,1.5644487552606,0.65156653411535,3.02699751316684,0,0.316462387440884,0,0,0,0.336985893439485,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,1.17447437874188,0,0,2.24203425192614,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0.25618263945135,0.130059347559878,0,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0.571994910780128,1.11437250398869,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0.805658634218294,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0.309157587715317,0.257640540045629,0.18611685633159,0,0.194874010322397,0.757301322732344,0.0920498986422993,0.161646056818812,0,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0.487894824518382,0.530119073285941,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,5.91195885475132,0.176096868026452,0,0.144119953416961,0.37872730027914,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0.394061520403854,0.646882724578552,0.128343036279748,0,0,0,0,0,0.749007023947182,2.99161459204025,0.414415513436035,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0.391602314925481,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0,0.307007349452259,0,0.107420244868274,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,1.29694662238543,0,0,0,0,0.245040215981032,0,0,0.355709216742071,0,0.399158742865633,0,0,0,0,0,0,2.50634477090067,0,0,0,0.851692475380653,0,0,0,0,0,0,2.46174797895425,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0.296964680832639,0,0,0.140669416410513,0.222617410045812,0,0.211125408127993,0,0,0,0.20453736500431,0.123084805461069,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0.10893846351899,0.139423744278603,0.153900517007594,0,0,0.179515288819544,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0.802577647298789,0,0.182454789215666,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0.0730893170861856,0,0,0,0,0.274083849293502,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0.13480708770837,0,0,0,0,0.643012593860077,0.275078873194468,0.83088067605837,0.2249738915515,2.32140586367385,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0,0,0.138348634936231,0.249960815924213,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0.251567901752575,0,0.228840068396924,0.453692771289717,0.466311601748341,0.295710299979268,0.159296767163702,0.449803112163605,0.310525913752519,0,0,0,0.150257608997218,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0.314531883711793,0,0.169732529954025,0,0.743614585554013,0.558644917973244,0.318004350653419,0.0788617450012534,0,0,0.3062454773532,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0.0675375846183947,0,0,0.063415810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| ||
|short_description=p16@JARID2 | |short_description=p16@JARID2 | ||
}} | }} |
Latest revision as of 06:10, 16 September 2015
Short description: | p16@JARID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_JARID2_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000341776, NM_004973, uc003nbj.2_5end |
EntrezGene: | JARID2 |
HGNC: | 6196 |
UniProt: | Q92833 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.89e-25 | 67 |
defensive cell | 8.88e-24 | 48 |
phagocyte | 8.88e-24 | 48 |
classical monocyte | 2.61e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.61e-23 | 42 |
myeloid cell | 2.89e-21 | 108 |
common myeloid progenitor | 2.89e-21 | 108 |
macrophage dendritic cell progenitor | 6.46e-21 | 61 |
myeloid leukocyte | 3.25e-20 | 72 |
myeloid lineage restricted progenitor cell | 3.26e-19 | 66 |
monopoietic cell | 1.50e-18 | 59 |
monocyte | 1.50e-18 | 59 |
monoblast | 1.50e-18 | 59 |
promonocyte | 1.50e-18 | 59 |
hematopoietic stem cell | 1.18e-15 | 168 |
hematopoietic oligopotent progenitor cell | 9.02e-15 | 161 |
hematopoietic multipotent progenitor cell | 9.02e-15 | 161 |
hematopoietic cell | 1.15e-14 | 177 |
leukocyte | 3.13e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 9.64e-13 | 120 |
nongranular leukocyte | 6.34e-10 | 115 |
intermediate monocyte | 2.35e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.35e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.09e-24 | 76 |
bone element | 1.13e-22 | 82 |
hematopoietic system | 6.29e-21 | 98 |
blood island | 6.29e-21 | 98 |
skeletal element | 2.12e-20 | 90 |
immune system | 1.20e-19 | 93 |
hemolymphoid system | 1.06e-18 | 108 |
skeletal system | 4.60e-18 | 100 |
musculoskeletal system | 6.32e-11 | 167 |
stroma of bone marrow | 1.91e-08 | 1 |
lateral plate mesoderm | 2.07e-08 | 203 |