FFCP PHASE1:Hg19::chr15:38856964..38857029,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10125 | |EntrezGene=10125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9878 | |HGNC=9878 | ||
|TSSclassifier=strong | |||
|UniProt=O95267,C9JCE5,C9JM27,F5H058,B2RA89 | |UniProt=O95267,C9JCE5,C9JM27,F5H058,B2RA89 | ||
|association_with_transcript=0bp_to_ENST00000310803,ENST00000415523,ENST00000431814,ENST00000541438,NM_001128602,NM_005739,uc001zkd.3,uc001zke.3_5end | |association_with_transcript=0bp_to_ENST00000310803,ENST00000415523,ENST00000431814,ENST00000541438,NM_001128602,NM_005739,uc001zkd.3,uc001zke.3_5end | ||
|cluster_id=chr15:38856964..38857029,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_1_at_RASGRP1_5end | |description=CAGE_peak_1_at_RASGRP1_5end | ||
|id=chr15:38856964..38857029,- | |id=chr15:38856964..38857029,- | ||
|ontology_enrichment_celltype=CL:0000738!5.83e-28!140;CL:0000542!2.13e-26!53;CL:0000051!2.13e-26!53;CL:0000838!4.98e-26!52;CL:0002087!4.08e-24!119;CL:0002031!1.22e-20!124;CL:0000037!8.00e-18!172;CL:0000566!8.00e-18!172;CL:0000988!2.35e-17!182;CL:0002032!9.51e-16!165;CL:0000837!9.51e-16!165;CL:0000084!7.61e-14!25;CL:0000827!7.61e-14!25;CL:0000791!8.70e-13!18;CL:0000789!8.70e-13!18;CL:0002420!8.70e-13!18;CL:0002419!8.70e-13!18;CL:0000790!8.70e-13!18;CL:0000945!1.73e-11!24;CL:0000826!1.73e-11!24;CL:0000625!1.97e-08!11;CL:0000236!3.50e-07!14 | |ontology_enrichment_celltype=CL:0000738!5.83e-28!140;CL:0000542!2.13e-26!53;CL:0000051!2.13e-26!53;CL:0000838!4.98e-26!52;CL:0002087!4.08e-24!119;CL:0002031!1.22e-20!124;CL:0000037!8.00e-18!172;CL:0000566!8.00e-18!172;CL:0000988!2.35e-17!182;CL:0002032!9.51e-16!165;CL:0000837!9.51e-16!165;CL:0000084!7.61e-14!25;CL:0000827!7.61e-14!25;CL:0000791!8.70e-13!18;CL:0000789!8.70e-13!18;CL:0002420!8.70e-13!18;CL:0002419!8.70e-13!18;CL:0000790!8.70e-13!18;CL:0000945!1.73e-11!24;CL:0000826!1.73e-11!24;CL:0000625!1.97e-08!11;CL:0000236!3.50e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.44e-17;53!CL:0000084;4.28e-16;25!CL:0000791;1.38e-14;18!CL:0000789;1.38e-14;18!CL:0002419;1.38e-14;18!CL:0000945;3.86e-13;24!CL:0000625;1.55e-09;11!CL:0002087;8.13e-09;104!CL:0000236;9.30e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.15e-30,53;CL:0000051,1.15e-30,53;CL:0000838,3.08e-30,52;CL:0000738,1.22e-29,136;CL:0002087,8.34e-26,115;CL:0002031,1.03e-21,120;CL:0000037,6.57e-19,168;CL:0000988,1.42e-18,177;CL:0002032,1.43e-16,161;CL:0000837,1.43e-16,161;CL:0000084,4.26e-16,25;CL:0000827,4.26e-16,25;CL:0000791,1.41e-14,18;CL:0000789,1.41e-14,18;CL:0002420,1.41e-14,18;CL:0002419,1.41e-14,18;CL:0000790,1.41e-14,18;CL:0000945,4.51e-13,24;CL:0000826,4.51e-13,24;CL:0000625,1.57e-09,11;CL:0000236,4.40e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.44e-17;53!CL:0000790;1.38e-14;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.89e-26!115;UBERON:0001049!1.04e-14!57;UBERON:0005068!1.04e-14!57;UBERON:0006241!1.04e-14!57;UBERON:0007135!1.04e-14!57;UBERON:0002780!1.07e-13!41;UBERON:0001890!1.07e-13!41;UBERON:0006240!1.07e-13!41;UBERON:0003080!1.21e-13!42;UBERON:0001893!1.64e-13!34;UBERON:0001869!2.10e-13!32;UBERON:0002791!4.99e-13!33;UBERON:0002020!5.55e-13!34;UBERON:0003528!5.55e-13!34;UBERON:0002616!8.57e-13!59;UBERON:0005743!1.36e-12!86;UBERON:0001017!2.20e-12!82;UBERON:0002619!9.56e-11!22;UBERON:0000073!1.41e-10!94;UBERON:0001016!1.41e-10!94;UBERON:0000956!2.73e-10!25;UBERON:0000203!2.73e-10!25;UBERON:0000955!3.38e-10!69;UBERON:0006238!3.38e-10!69;UBERON:0001950!5.70e-10!20;UBERON:0000178!2.06e-09!15;UBERON:0000179!2.06e-09!15;UBERON:0000463!2.06e-09!15;UBERON:0003075!1.15e-08!86;UBERON:0007284!1.15e-08!86;UBERON:0002390!3.32e-08!102;UBERON:0003061!3.32e-08!102;UBERON:0003056!8.77e-08!61;UBERON:0002346!1.71e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!3.89e-26!115;UBERON:0001049!1.04e-14!57;UBERON:0005068!1.04e-14!57;UBERON:0006241!1.04e-14!57;UBERON:0007135!1.04e-14!57;UBERON:0002780!1.07e-13!41;UBERON:0001890!1.07e-13!41;UBERON:0006240!1.07e-13!41;UBERON:0003080!1.21e-13!42;UBERON:0001893!1.64e-13!34;UBERON:0001869!2.10e-13!32;UBERON:0002791!4.99e-13!33;UBERON:0002020!5.55e-13!34;UBERON:0003528!5.55e-13!34;UBERON:0002616!8.57e-13!59;UBERON:0005743!1.36e-12!86;UBERON:0001017!2.20e-12!82;UBERON:0002619!9.56e-11!22;UBERON:0000073!1.41e-10!94;UBERON:0001016!1.41e-10!94;UBERON:0000956!2.73e-10!25;UBERON:0000203!2.73e-10!25;UBERON:0000955!3.38e-10!69;UBERON:0006238!3.38e-10!69;UBERON:0001950!5.70e-10!20;UBERON:0000178!2.06e-09!15;UBERON:0000179!2.06e-09!15;UBERON:0000463!2.06e-09!15;UBERON:0003075!1.15e-08!86;UBERON:0007284!1.15e-08!86;UBERON:0002390!3.32e-08!102;UBERON:0003061!3.32e-08!102;UBERON:0003056!8.77e-08!61;UBERON:0002346!1.71e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.01e-13;32!UBERON:0001893;5.41e-13;34!UBERON:0002791;6.77e-13;32!UBERON:0003528;2.08e-12;34!UBERON:0002020;2.08e-12;34!UBERON:0002619;3.06e-12;22!UBERON:0001950;2.43e-11;20!UBERON:0000956;3.29e-11;25!UBERON:0000203;3.29e-11;25!UBERON:0000178;1.16e-10;15!UBERON:0000179;1.16e-10;15!UBERON:0000463;1.16e-10;15!UBERON:0002780;3.09e-10;41!UBERON:0001890;3.09e-10;41!UBERON:0000073;5.25e-09;53!UBERON:0002616;5.25e-09;53!UBERON:0007023;2.05e-07;114 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,2.21160542851358,1.39560233594486,0,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0,2.0036519099174,1.23186982565596,0.87879847716362,131.354644480728,107.962275126679,117.987461189205,15.7345710739562,63.7156800841373,21.6742572642506,0,0,0,12.4722192934286,28.8603541949466,2.05520307534393,24.3757979754026,29.680578225581,27.5603805809132,3.13481663935894,14.2513213048351,3.34848237924443,1.30858414901608,3.77875943688809,0.727752183563449,2.78914844286822,4.11167888021826,2.47765096716083,1.7261543539329,3.33008918487831,1.89185783910868,1.03423704220986,3.22742341791913,4.06279459783025,1.88242339542605,2.18324920046277,1.12361742222542,3.06083892370903,4.8139354061414,0.639337125799041,1.31940520074686,2.79249120670285,2.55734850319616,6.38460324982885,10.2129340444405,11.2108004819203,2.76373531782418,0.521482918420201,1.08594422352558,6.05399502633369,9.57521853567668,8.86094684834476,0,0.212604299965044,0.628975936525128,0.112328631146495,0,0,0.285012743741249,0.59675003159727,0.182664153764634,45.7590235599439,29.4914850081551,21.3482220927253,34.9918782504536,28.0277190925209,22.9900975981793,25.7807500386096,19.0810750907073,52.3675931580693,78.6897833757058,72.2496401156683,0,40.9171250976521,2.37045676297569,121.566637930349,131.265594758221,145.771462790652,140.102283137388,85.0657115913671,74.3313055003531,107.154700624351,146.838982174659,157.024948684088,157.067531259787,154.087398482294,151.019665956571,132.270356468396,129.248193018489,108.052856954267,132.440010180919,134.792485914313,133.770414044857,110.807655233275,156.820130293432,122.630557952615,120.613233364403,138.401771534668,111.497895013434,108.730936794022,102.648820800424,87.7852944223415,104.437074702005,131.177262879963,114.36341273726,109.210023590499,111.690135746502,120.882968494145,95.1496333509989,0,0,0,0,1.00267582127178,0.144846518960824,0,0.973269740605272,0.189069634328136,0.221729397462564,0.87834785693126,9.36500389808645,0,0,9.41187441598582,9.40300581416043,19.0129883541977,2.8618874916641,4.0039643754609,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0.112611480483322,0,0,0,17.1314542666882,27.1446184903828,0,0.993943903390637,0.506522046658319,0.529636723252875,0,2.12801029319014,1.12135520028461,3.20246987189115,2.71334303258876,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,1.07633781413317,3.84403299873421,2.7551147150743,0.600182192168805,1.13357782162283,0,0.558350568994769,0,0.194874010322397,1.26216887122057,3.03764665519588,0.161646056818812,0.355009592516614,0.503760491138201,1.18692414617341,0.193260853163297,0.272746120590835,0,4.02513230227665,3.04818467139416,3.71820617182459,3.10983165046111,2.77552935963191,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,76.8145792981492,1.59884970106048,0.514703430895577,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,0,1.04337364477569,1.29149563659404,0.288732895522148,0,0,10.2726571734706,7.72637545885385,0.492434012174795,13.3382431129365,2.52672975890838,0,0.16798212819886,0,0,0,0,0,0.880484340132261,1.4512968087854,1.29707958075265,0.37872730027914,0,0,0,0,0,0,0,0,0.43596006883328,0,1.93907573636667,0,0,5.85063856486715,5.2003718455683,0,0,0,0.857867961948885,0,0,0,1.42156779497018,0,1.20575750823834,0,1.89948683245908,3.64871341923571,0.502257091432126,0,0.239624855491583,2.29723871668228,0,0,0,0,25.8916682625048,102.061933784598,134.982861862058,93.9471025567758,10.6719742173435,11.712586847186,12.3726210044431,8.54332953205179,7.65526501983796,5.24304916763028,5.9832291840805,11.603634376209,0,0,0.271265023699736,5.40724239980099,2.49800584316026,2.52323864054295,3.5142424497814,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,74.4364894042395,52.6342649997425,71.9343739595215,0,0,0,0.744323423456331,0.306923946576125,0,0,0.511707249066704,0.482561763430822,0,0,0,0,0,0,1.0877350463246,0,0.184161977871793,0.114814448164607,0.910455840033585,0.524497659837696,1.35359883872224,1.00119938235739,0,0,0.422206515571503,0,0,0,0,0.270946437543853,0.501689773854853,2.03901018436031,3.3243040357149,0,0,0,2.82095137628028,0.328014645699706,1.62689197332152,14.2196596073857,0,0,0.574265537996172,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0.596586391912706,0.0890320356467374,0,0,0,0.30347334256665,0.464845549297286,0,0,0,0,0,0.18532421910392,0.715624433709956,0.372158369359667,0.632758849437452,2.85945290885737,0,0,0,0,0,0.54907405947211,0,0.202182481573316,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0.405820753925408,3.0982349809975,0,0.143411352204052,2.16147890228867,0,0,1.05553817648832,0,0,0,0,0.670302275535787,0,13.2742759095259,0,0,0.443430153536676,0,30.9543041631623,36.702585942834,47.8503637226297,49.3139775197623,48.5407482241709,44.7446584722975,56.1632694727639,54.7256371643047,0,31.7618352236908,0.2450402159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| ||
|short_description=p1@RASGRP1 | |short_description=p1@RASGRP1 | ||
}} | }} |
Latest revision as of 08:59, 17 September 2015
Short description: | p1@RASGRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASGRP1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000310803, ENST00000415523, ENST00000431814, ENST00000541438, NM_001128602, NM_005739, uc001zkd.3, uc001zke.3_5end |
EntrezGene: | RASGRP1 |
HGNC: | 9878 |
UniProt: | O95267C9JCE5C9JM27F5H058B2RA89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.15e-30 | 53 |
common lymphoid progenitor | 1.15e-30 | 53 |
lymphoid lineage restricted progenitor cell | 3.08e-30 | 52 |
leukocyte | 1.22e-29 | 136 |
nongranular leukocyte | 8.34e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 1.03e-21 | 120 |
hematopoietic stem cell | 6.57e-19 | 168 |
hematopoietic cell | 1.42e-18 | 177 |
hematopoietic oligopotent progenitor cell | 1.43e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.43e-16 | 161 |
T cell | 4.26e-16 | 25 |
pro-T cell | 4.26e-16 | 25 |
mature alpha-beta T cell | 1.41e-14 | 18 |
alpha-beta T cell | 1.41e-14 | 18 |
immature T cell | 1.41e-14 | 18 |
mature T cell | 1.41e-14 | 18 |
immature alpha-beta T cell | 1.41e-14 | 18 |
lymphocyte of B lineage | 4.51e-13 | 24 |
pro-B cell | 4.51e-13 | 24 |
CD8-positive, alpha-beta T cell | 1.57e-09 | 11 |
B cell | 4.40e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.73e-26 | 114 |
neural tube | 2.53e-15 | 56 |
neural rod | 2.53e-15 | 56 |
future spinal cord | 2.53e-15 | 56 |
neural keel | 2.53e-15 | 56 |
regional part of nervous system | 4.11e-15 | 53 |
regional part of brain | 4.11e-15 | 53 |
telencephalon | 8.01e-15 | 34 |
cerebral hemisphere | 1.10e-14 | 32 |
brain grey matter | 3.19e-14 | 34 |
gray matter | 3.19e-14 | 34 |
regional part of telencephalon | 4.61e-14 | 32 |
regional part of forebrain | 8.83e-14 | 41 |
forebrain | 8.83e-14 | 41 |
anterior neural tube | 8.83e-14 | 41 |
future forebrain | 8.83e-14 | 41 |
central nervous system | 1.78e-12 | 81 |
regional part of cerebral cortex | 3.27e-12 | 22 |
neocortex | 2.59e-11 | 20 |
cerebral cortex | 4.26e-11 | 25 |
pallium | 4.26e-11 | 25 |
blood | 1.15e-10 | 15 |
haemolymphatic fluid | 1.15e-10 | 15 |
organism substance | 1.15e-10 | 15 |
nervous system | 2.07e-10 | 89 |
brain | 2.43e-10 | 68 |
future brain | 2.43e-10 | 68 |
neural plate | 1.60e-08 | 82 |
presumptive neural plate | 1.60e-08 | 82 |
hematopoietic system | 2.59e-08 | 98 |
blood island | 2.59e-08 | 98 |
pre-chordal neural plate | 1.10e-07 | 61 |
neurectoderm | 2.38e-07 | 86 |
hemolymphoid system | 6.44e-07 | 108 |