FFCP PHASE1:Hg19::chr2:38402050..38402059,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:38402050..38402059,+ | |||
|description=CAGE_peak_at_chr2:38402050..38402059,+ | |description=CAGE_peak_at_chr2:38402050..38402059,+ | ||
|id=chr2:38402050..38402059,+ | |id=chr2:38402050..38402059,+ | ||
|ontology_enrichment_celltype=CL:0000064!2.33e-10!3;CL:0005012!2.33e-10!3;CL:0000067!2.33e-10!3;CL:0002304!2.33e-10!3;CL:0002057!3.87e-07!42 | |ontology_enrichment_celltype=CL:0000064!2.33e-10!3;CL:0005012!2.33e-10!3;CL:0000067!2.33e-10!3;CL:0002304!2.33e-10!3;CL:0002057!3.87e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.71e-14;3!CL:0000067;1.71e-14;3!CL:0005012;1.71e-14;3!CL:0002304;1.71e-14;3!CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4!CL:0000075;7.24e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.83e-14,3;CL:0000067,1.83e-14,3;CL:0005012,1.83e-14,3;CL:0002304,1.83e-14,3;CL:0000306,3.10e-11,4;CL:0002222,3.10e-11,4;CL:0002224,3.10e-11,4;CL:0000075,7.24e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!2.33e-10!3;UBERON:0001775!2.33e-10!3;UBERON:0000488!7.28e-08!4 | |ontology_enrichment_uberon=UBERON:0001778!2.33e-10!3;UBERON:0001775!2.33e-10!3;UBERON:0000488!7.28e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;6.62e-41;1!UBERON:0009842;6.62e-41;1!UBERON:0003704;6.62e-41;1!UBERON:0001171;6.62e-41;1!UBERON:0001172;6.62e-41;1!UBERON:0007625;2.17e-15;11!UBERON:0001280;1.22e-14;3!UBERON:0004647;1.22e-14;3!UBERON:0001778;1.71e-14;3!UBERON:0001775;1.71e-14;3!UBERON:0001801;2.51e-12;14!UBERON:0002394;2.53e-11;4!UBERON:0003928;2.53e-11;4!UBERON:0010077;3.26e-11;4!UBERON:0005389;3.26e-11;4!UBERON:0000488;3.26e-11;4!UBERON:0000484;3.26e-11;4!UBERON:0000965;3.26e-11;4!UBERON:0001803;3.26e-11;4!UBERON:0000019;2.36e-09;19!UBERON:0000047;2.36e-09;19!UBERON:0004088;2.36e-09;19!UBERON:0010230;2.36e-09;19!UBERON:0000970;6.17e-09;20!UBERON:0002104;1.48e-08;21!UBERON:0001456;1.48e-08;21!UBERON:0002203;6.55e-08;6!UBERON:0001768;6.55e-08;6!UBERON:0002200;6.55e-08;6!UBERON:0000020;6.75e-08;23!UBERON:0001032;1.31e-07;24!UBERON:0004456;1.31e-07;24!UBERON:0002294;5.08e-07;7!UBERON:0001173;5.08e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,6.62e-41,1;UBERON:0009842,6.62e-41,1;UBERON:0003704,6.62e-41,1;UBERON:0001171,6.62e-41,1;UBERON:0001172,6.62e-41,1;UBERON:0007625,2.17e-15,11;UBERON:0001280,1.22e-14,3;UBERON:0004647,1.22e-14,3;UBERON:0005171,1.22e-14,3;UBERON:0001778,1.83e-14,3;UBERON:0001775,1.83e-14,3;UBERON:0001801,2.51e-12,14;UBERON:0010077,3.10e-11,4;UBERON:0005389,3.10e-11,4;UBERON:0000484,3.10e-11,4;UBERON:0002546,3.10e-11,4;UBERON:0000965,3.10e-11,4;UBERON:0001803,3.10e-11,4;UBERON:0003073,3.10e-11,4;UBERON:0005426,3.10e-11,4;UBERON:0000488,3.42e-11,4;UBERON:0000019,6.17e-09,20;UBERON:0000047,6.17e-09,20;UBERON:0010312,6.17e-09,20;UBERON:0004088,6.17e-09,20;UBERON:0010230,6.17e-09,20;UBERON:0003072,6.17e-09,20;UBERON:0004128,6.17e-09,20;UBERON:0003071,6.17e-09,20;UBERON:0000970,1.48e-08,21;UBERON:0002104,1.48e-08,21;UBERON:0001456,3.27e-08,22;UBERON:0002394,5.54e-08,6;UBERON:0003928,5.54e-08,6;UBERON:0002203,6.78e-08,6;UBERON:0001768,6.78e-08,6;UBERON:0002200,6.78e-08,6;UBERON:0000020,1.31e-07,24;UBERON:0001032,1.31e-07,24;UBERON:0004456,1.31e-07,24 | |||
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| ||
|short_description=p@chr2:38402050..38402059,+ | |short_description=p@chr2:38402050..38402059,+ | ||
}} | }} |
Latest revision as of 09:58, 29 July 2015
Short description: | p@chr2:38402050..38402059, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:38402050..38402059, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.83e-14 | 3 |
ciliated epithelial cell | 1.83e-14 | 3 |
multi-ciliated epithelial cell | 1.83e-14 | 3 |
non-pigmented ciliary epithelial cell | 1.83e-14 | 3 |
crystallin accumulating cell | 3.10e-11 | 4 |
vertebrate lens cell | 3.10e-11 | 4 |
lens epithelial cell | 3.10e-11 | 4 |
columnar/cuboidal epithelial cell | 7.24e-07 | 27 |