FFCP PHASE1:Hg19::chr19:1257414..1257448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90007 | |EntrezGene=90007 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16298 | |HGNC=16298 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=169bp_to_AK075506_5end | |association_with_transcript=169bp_to_AK075506_5end | ||
|cluster_id=chr19:1257414..1257448,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_3_at_MIDN_5end | |description=CAGE_peak_3_at_MIDN_5end | ||
|id=chr19:1257414..1257448,+ | |id=chr19:1257414..1257448,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.89e-13!76;CL:0000860!1.36e-12!45;CL:0002057!7.22e-12!42;CL:0000557!7.75e-10!71;CL:0002194!2.18e-09!63;CL:0000576!2.18e-09!63;CL:0000040!2.18e-09!63;CL:0000559!2.18e-09!63;CL:0002009!4.14e-09!65;CL:0000839!4.44e-09!70 | |ontology_enrichment_celltype=CL:0000766!1.89e-13!76;CL:0000860!1.36e-12!45;CL:0002057!7.22e-12!42;CL:0000557!7.75e-10!71;CL:0002194!2.18e-09!63;CL:0000576!2.18e-09!63;CL:0000040!2.18e-09!63;CL:0000559!2.18e-09!63;CL:0002009!4.14e-09!65;CL:0000839!4.44e-09!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.45e-10;33!CL:0002057;6.45e-10;33!CL:0000473;2.20e-08;39!CL:0000234;2.20e-08;39!CL:0000766;5.87e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.39e-13,72;CL:0000860,6.80e-12,42;CL:0002057,6.80e-12,42;CL:0000473,7.66e-12,48;CL:0000234,7.66e-12,48;CL:0000557,3.27e-09,67;CL:0002194,8.22e-09,59;CL:0000576,8.22e-09,59;CL:0000040,8.22e-09,59;CL:0000559,8.22e-09,59;CL:0000839,1.51e-08,66;CL:0002009,1.73e-08,61 | |||
|ontology_enrichment_development_v019=CL:0002057;3.28e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.30e-10!80;UBERON:0002390!1.07e-09!102;UBERON:0003061!1.07e-09!102;UBERON:0001474!1.46e-09!86;UBERON:0002193!1.29e-08!112;UBERON:0004765!1.70e-08!101;UBERON:0001434!1.70e-08!101;UBERON:0002405!2.39e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!6.30e-10!80;UBERON:0002390!1.07e-09!102;UBERON:0003061!1.07e-09!102;UBERON:0001474!1.46e-09!86;UBERON:0002193!1.29e-08!112;UBERON:0004765!1.70e-08!101;UBERON:0001434!1.70e-08!101;UBERON:0002405!2.39e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.63e-09,76;UBERON:0002390,4.06e-09,98;UBERON:0003061,4.06e-09,98;UBERON:0001474,5.98e-09,82;UBERON:0004765,1.01e-08,90;UBERON:0001434,1.40e-08,100;UBERON:0002193,4.81e-08,108;UBERON:0002405,5.01e-07,93 | |||
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| ||
|short_description=p3@MIDN | |short_description=p3@MIDN | ||
}} | }} |
Latest revision as of 18:40, 15 September 2015
Short description: | p3@MIDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIDN_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 169bp_to_AK075506_5end |
EntrezGene: | MIDN |
HGNC: | 16298 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.39e-13 | 72 |
classical monocyte | 6.80e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.80e-12 | 42 |
defensive cell | 7.66e-12 | 48 |
phagocyte | 7.66e-12 | 48 |
granulocyte monocyte progenitor cell | 3.27e-09 | 67 |
monopoietic cell | 8.22e-09 | 59 |
monocyte | 8.22e-09 | 59 |
monoblast | 8.22e-09 | 59 |
promonocyte | 8.22e-09 | 59 |
myeloid lineage restricted progenitor cell | 1.51e-08 | 66 |
macrophage dendritic cell progenitor | 1.73e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.63e-09 | 76 |
hematopoietic system | 4.06e-09 | 98 |
blood island | 4.06e-09 | 98 |
bone element | 5.98e-09 | 82 |
skeletal element | 1.01e-08 | 90 |
skeletal system | 1.40e-08 | 100 |
hemolymphoid system | 4.81e-08 | 108 |
immune system | 5.01e-07 | 93 |