FFCP PHASE1:Hg19::chr1:154946917..154946928,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6464 | |EntrezGene=6464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10840 | |HGNC=10840 | ||
|TSSclassifier=strong | |||
|UniProt=P29353 | |UniProt=P29353 | ||
|association_with_transcript=30bp_to_NM_001130041,NM_001202859,NM_003029,uc001ffx.2,uc001ffy.2_5end | |association_with_transcript=30bp_to_NM_001130041,NM_001202859,NM_003029,uc001ffx.2,uc001ffy.2_5end | ||
|cluster_id=chr1:154946917..154946928,- | |||
|description=CAGE_peak_9_at_SHC1_5end | |description=CAGE_peak_9_at_SHC1_5end | ||
|id=chr1:154946917..154946928,- | |id=chr1:154946917..154946928,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.44e-09;33!CL:0002057;1.44e-09;33!CL:0000473;5.27e-07;39!CL:0000234;5.27e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.19e-07,42;CL:0002057,1.19e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.05e-11!235;DOID:14566!4.23e-10!239;DOID:0050687!5.68e-08!143 | |ontology_enrichment_disease=DOID:162!9.05e-11!235;DOID:14566!4.23e-10!239;DOID:0050687!5.68e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p9@SHC1 | |short_description=p9@SHC1 | ||
}} | }} |
Latest revision as of 10:54, 17 September 2015
Short description: | p9@SHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SHC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_NM_001130041, NM_001202859, NM_003029, uc001ffx.2, uc001ffy.2_5end |
EntrezGene: | SHC1 |
HGNC: | 10840 |
UniProt: | P29353 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.19e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-07 | 42 |