FFCP PHASE1:Hg19::chr2:201729344..201729359,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1195 | |EntrezGene=1195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2068 | |HGNC=2068 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000432425_5end | |association_with_transcript=19bp_to_ENST00000432425_5end | ||
|cluster_id=chr2:201729344..201729359,- | |||
|coexpression_cluster_id=C280 | |coexpression_cluster_id=C280 | ||
|description=CAGE_peak_3_at_CLK1_5end | |description=CAGE_peak_3_at_CLK1_5end | ||
|id=chr2:201729344..201729359,- | |id=chr2:201729344..201729359,- | ||
|ontology_enrichment_celltype=CL:0000738!3.88e-30!140;CL:0002031!3.07e-24!124;CL:0000037!5.88e-24!172;CL:0000566!5.88e-24!172;CL:0002087!1.04e-21!119;CL:0000988!1.18e-21!182;CL:0002057!2.53e-21!42;CL:0002032!2.60e-21!165;CL:0000837!2.60e-21!165;CL:0000860!2.09e-19!45;CL:0000766!1.11e-18!76;CL:0000557!1.96e-16!71;CL:0000839!2.28e-15!70;CL:0002009!5.26e-14!65;CL:0000763!1.77e-13!112;CL:0000049!1.77e-13!112;CL:0002194!5.00e-13!63;CL:0000576!5.00e-13!63;CL:0000040!5.00e-13!63;CL:0000559!5.00e-13!63;CL:0000838!2.68e-08!52;CL:0000542!7.69e-08!53;CL:0000051!7.69e-08!53 | |ontology_enrichment_celltype=CL:0000738!3.88e-30!140;CL:0002031!3.07e-24!124;CL:0000037!5.88e-24!172;CL:0000566!5.88e-24!172;CL:0002087!1.04e-21!119;CL:0000988!1.18e-21!182;CL:0002057!2.53e-21!42;CL:0002032!2.60e-21!165;CL:0000837!2.60e-21!165;CL:0000860!2.09e-19!45;CL:0000766!1.11e-18!76;CL:0000557!1.96e-16!71;CL:0000839!2.28e-15!70;CL:0002009!5.26e-14!65;CL:0000763!1.77e-13!112;CL:0000049!1.77e-13!112;CL:0002194!5.00e-13!63;CL:0000576!5.00e-13!63;CL:0000040!5.00e-13!63;CL:0000559!5.00e-13!63;CL:0000838!2.68e-08!52;CL:0000542!7.69e-08!53;CL:0000051!7.69e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.66e-20;33!CL:0002057;9.66e-20;33!CL:0000576;2.13e-14;48!CL:0000473;4.59e-13;39!CL:0000234;4.59e-13;39!CL:0000766;1.11e-12;69!CL:0002087;5.23e-09;104!CL:0000738;4.69e-07;136!CL:0000094;7.55e-07;8!CL:0000791;7.76e-07;18!CL:0000789;7.76e-07;18!CL:0002419;7.76e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.54e-32,136;CL:0000860,2.20e-27,42;CL:0002057,2.20e-27,42;CL:0002031,1.11e-25,120;CL:0000766,2.96e-24,72;CL:0000037,7.77e-24,168;CL:0002087,9.11e-23,115;CL:0000473,2.34e-22,48;CL:0000234,2.34e-22,48;CL:0000988,5.38e-22,177;CL:0000557,2.82e-21,67;CL:0002032,4.05e-21,161;CL:0000837,4.05e-21,161;CL:0000839,7.60e-20,66;CL:0002009,4.71e-18,61;CL:0002194,9.49e-17,59;CL:0000576,9.49e-17,59;CL:0000040,9.49e-17,59;CL:0000559,9.49e-17,59;CL:0000763,1.98e-15,108;CL:0000049,1.98e-15,108;CL:0002393,2.84e-07,9;CL:0002397,2.84e-07,9;CL:0000791,5.67e-07,18;CL:0000789,5.67e-07,18;CL:0002420,5.67e-07,18;CL:0002419,5.67e-07,18;CL:0000790,5.67e-07,18;CL:0000094,8.79e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.43e-20;42!CL:0000790;7.76e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.43e-22!115;UBERON:0002390!2.00e-16!102;UBERON:0003061!2.00e-16!102;UBERON:0002193!1.71e-14!112;UBERON:0002371!1.04e-13!80;UBERON:0001474!1.07e-13!86;UBERON:0001049!8.78e-11!57;UBERON:0005068!8.78e-11!57;UBERON:0006241!8.78e-11!57;UBERON:0007135!8.78e-11!57;UBERON:0004765!8.79e-11!101;UBERON:0001434!8.79e-11!101;UBERON:0003080!2.57e-09!42;UBERON:0002405!3.95e-09!115;UBERON:0002780!7.51e-09!41;UBERON:0001890!7.51e-09!41;UBERON:0006240!7.51e-09!41;UBERON:0001017!1.81e-08!82;UBERON:0002616!6.53e-08!59;UBERON:0005743!8.00e-08!86;UBERON:0002020!1.21e-07!34;UBERON:0003528!1.21e-07!34;UBERON:0001893!1.80e-07!34;UBERON:0002791!3.08e-07!33;UBERON:0002619!3.15e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!2.43e-22!115;UBERON:0002390!2.00e-16!102;UBERON:0003061!2.00e-16!102;UBERON:0002193!1.71e-14!112;UBERON:0002371!1.04e-13!80;UBERON:0001474!1.07e-13!86;UBERON:0001049!8.78e-11!57;UBERON:0005068!8.78e-11!57;UBERON:0006241!8.78e-11!57;UBERON:0007135!8.78e-11!57;UBERON:0004765!8.79e-11!101;UBERON:0001434!8.79e-11!101;UBERON:0003080!2.57e-09!42;UBERON:0002405!3.95e-09!115;UBERON:0002780!7.51e-09!41;UBERON:0001890!7.51e-09!41;UBERON:0006240!7.51e-09!41;UBERON:0001017!1.81e-08!82;UBERON:0002616!6.53e-08!59;UBERON:0005743!8.00e-08!86;UBERON:0002020!1.21e-07!34;UBERON:0003528!1.21e-07!34;UBERON:0001893!1.80e-07!34;UBERON:0002791!3.08e-07!33;UBERON:0002619!3.15e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.10e-09;41!UBERON:0001890;8.10e-09;41!UBERON:0003528;1.59e-08;34!UBERON:0002020;1.59e-08;34!UBERON:0002791;2.44e-08;32!UBERON:0002619;3.23e-08;22!UBERON:0001893;3.29e-08;34!UBERON:0001869;4.47e-08;32!UBERON:0007023;1.25e-07;114!UBERON:0000073;1.59e-07;53!UBERON:0002616;1.59e-07;53!UBERON:0001950;2.24e-07;20 | |||
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| ||
|short_description=p3@CLK1 | |short_description=p3@CLK1 | ||
}} | }} |
Latest revision as of 11:23, 19 September 2015
Short description: | p3@CLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLK1_5end |
Coexpression cluster: | C280_Mast_Natural_CD19_CD8_Eosinophils_CD34_CD4 |
Association with transcript: | 19bp_to_ENST00000432425_5end |
EntrezGene: | CLK1 |
HGNC: | 2068 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.54e-32 | 136 |
classical monocyte | 2.20e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.20e-27 | 42 |
hematopoietic lineage restricted progenitor cell | 1.11e-25 | 120 |
myeloid leukocyte | 2.96e-24 | 72 |
hematopoietic stem cell | 7.77e-24 | 168 |
nongranular leukocyte | 9.11e-23 | 115 |
defensive cell | 2.34e-22 | 48 |
phagocyte | 2.34e-22 | 48 |
hematopoietic cell | 5.38e-22 | 177 |
granulocyte monocyte progenitor cell | 2.82e-21 | 67 |
hematopoietic oligopotent progenitor cell | 4.05e-21 | 161 |
hematopoietic multipotent progenitor cell | 4.05e-21 | 161 |
myeloid lineage restricted progenitor cell | 7.60e-20 | 66 |
macrophage dendritic cell progenitor | 4.71e-18 | 61 |
monopoietic cell | 9.49e-17 | 59 |
monocyte | 9.49e-17 | 59 |
monoblast | 9.49e-17 | 59 |
promonocyte | 9.49e-17 | 59 |
myeloid cell | 1.98e-15 | 108 |
common myeloid progenitor | 1.98e-15 | 108 |
intermediate monocyte | 2.84e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.84e-07 | 9 |
mature alpha-beta T cell | 5.67e-07 | 18 |
alpha-beta T cell | 5.67e-07 | 18 |
immature T cell | 5.67e-07 | 18 |
mature T cell | 5.67e-07 | 18 |
immature alpha-beta T cell | 5.67e-07 | 18 |
granulocyte | 8.79e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.08e-26 | 114 |
hematopoietic system | 1.98e-20 | 98 |
blood island | 1.98e-20 | 98 |
bone marrow | 7.35e-19 | 76 |
hemolymphoid system | 4.63e-18 | 108 |
bone element | 5.41e-18 | 82 |
immune system | 4.48e-16 | 93 |
skeletal element | 7.08e-15 | 90 |
neural tube | 6.74e-14 | 56 |
neural rod | 6.74e-14 | 56 |
future spinal cord | 6.74e-14 | 56 |
neural keel | 6.74e-14 | 56 |
skeletal system | 8.90e-13 | 100 |
regional part of nervous system | 2.23e-12 | 53 |
regional part of brain | 2.23e-12 | 53 |
regional part of forebrain | 2.82e-11 | 41 |
forebrain | 2.82e-11 | 41 |
anterior neural tube | 2.82e-11 | 41 |
future forebrain | 2.82e-11 | 41 |
brain grey matter | 3.41e-10 | 34 |
gray matter | 3.41e-10 | 34 |
central nervous system | 3.76e-10 | 81 |
telencephalon | 5.86e-10 | 34 |
regional part of telencephalon | 3.01e-09 | 32 |
cerebral hemisphere | 6.00e-09 | 32 |
neural plate | 2.49e-08 | 82 |
presumptive neural plate | 2.49e-08 | 82 |
regional part of cerebral cortex | 2.49e-08 | 22 |
nervous system | 2.62e-08 | 89 |
brain | 7.33e-08 | 68 |
future brain | 7.33e-08 | 68 |
neurectoderm | 9.09e-08 | 86 |
neocortex | 1.83e-07 | 20 |