FFCP PHASE1:Hg19::chr14:76447888..76447911,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7043 | |EntrezGene=7043 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11769 | |HGNC=11769 | ||
|TSSclassifier=strong | |||
|UniProt=A5YM40,B3KVH9,P10600,Q8WV88 | |UniProt=A5YM40,B3KVH9,P10600,Q8WV88 | ||
|association_with_transcript=180bp_to_NM_003239,uc001xsc.2,uc001xsd.2_5end | |association_with_transcript=180bp_to_NM_003239,uc001xsc.2,uc001xsd.2_5end | ||
|cluster_id=chr14:76447888..76447911,- | |||
|description=CAGE_peak_9_at_TGFB3_5end | |description=CAGE_peak_9_at_TGFB3_5end | ||
|id=chr14:76447888..76447911,- | |id=chr14:76447888..76447911,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002605;6.73e-09;3!CL:0000167;1.14e-07;1!CL:0000164;1.14e-07;1!CL:0000502;1.14e-07;1!CL:0000172;1.14e-07;1!CL:0000173;1.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.74e-09,3;CL:0000167,1.33e-07,1;CL:0000164,1.33e-07,1;CL:0000502,1.33e-07,1;CL:0000172,1.33e-07,1;CL:0000173,1.33e-07,1;CL:0002351,1.33e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008425;7.02e-08;1!CL:0002351;1.14e-07;1!UBERON:0000358;1.14e-07;1!UBERON:0010227;2.74e-07;1!UBERON:0010115;2.74e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;1.14e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.33e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.48e-28!115;UBERON:0001049!6.69e-19!57;UBERON:0005068!6.69e-19!57;UBERON:0006241!6.69e-19!57;UBERON:0007135!6.69e-19!57;UBERON:0002616!2.15e-16!59;UBERON:0002346!4.29e-16!90;UBERON:0003075!9.61e-16!86;UBERON:0007284!9.61e-16!86;UBERON:0001017!2.88e-15!82;UBERON:0000955!5.98e-15!69;UBERON:0006238!5.98e-15!69;UBERON:0005743!6.28e-15!86;UBERON:0000073!5.04e-14!94;UBERON:0001016!5.04e-14!94;UBERON:0001893!5.24e-14!34;UBERON:0002780!1.01e-13!41;UBERON:0001890!1.01e-13!41;UBERON:0006240!1.01e-13!41;UBERON:0002791!2.02e-13!33;UBERON:0003080!3.45e-13!42;UBERON:0002020!5.34e-13!34;UBERON:0003528!5.34e-13!34;UBERON:0001869!1.87e-12!32;UBERON:0000153!2.09e-11!129;UBERON:0007811!2.09e-11!129;UBERON:0000956!1.50e-10!25;UBERON:0000203!1.50e-10!25;UBERON:0003056!4.02e-10!61;UBERON:0000033!4.27e-10!123;UBERON:0000924!8.43e-09!173;UBERON:0006601!8.43e-09!173;UBERON:0004121!1.96e-08!169;UBERON:0002619!5.99e-08!22;UBERON:0001950!1.23e-07!20;UBERON:0003076!4.45e-07!15;UBERON:0003057!4.45e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.48e-28!115;UBERON:0001049!6.69e-19!57;UBERON:0005068!6.69e-19!57;UBERON:0006241!6.69e-19!57;UBERON:0007135!6.69e-19!57;UBERON:0002616!2.15e-16!59;UBERON:0002346!4.29e-16!90;UBERON:0003075!9.61e-16!86;UBERON:0007284!9.61e-16!86;UBERON:0001017!2.88e-15!82;UBERON:0000955!5.98e-15!69;UBERON:0006238!5.98e-15!69;UBERON:0005743!6.28e-15!86;UBERON:0000073!5.04e-14!94;UBERON:0001016!5.04e-14!94;UBERON:0001893!5.24e-14!34;UBERON:0002780!1.01e-13!41;UBERON:0001890!1.01e-13!41;UBERON:0006240!1.01e-13!41;UBERON:0002791!2.02e-13!33;UBERON:0003080!3.45e-13!42;UBERON:0002020!5.34e-13!34;UBERON:0003528!5.34e-13!34;UBERON:0001869!1.87e-12!32;UBERON:0000153!2.09e-11!129;UBERON:0007811!2.09e-11!129;UBERON:0000956!1.50e-10!25;UBERON:0000203!1.50e-10!25;UBERON:0003056!4.02e-10!61;UBERON:0000033!4.27e-10!123;UBERON:0000924!8.43e-09!173;UBERON:0006601!8.43e-09!173;UBERON:0004121!1.96e-08!169;UBERON:0002619!5.99e-08!22;UBERON:0001950!1.23e-07!20;UBERON:0003076!4.45e-07!15;UBERON:0003057!4.45e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.74e-07;1!UBERON:0002372;2.74e-07;1!UBERON:0007029;2.74e-07;1!UBERON:0002079;2.74e-07;1!UBERON:0001961;2.74e-07;1!UBERON:0001744;2.74e-07;1!UBERON:0001042;2.74e-07;1!UBERON:0001735;2.74e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,1.61e-07,1;UBERON:0007645,1.61e-07,1;UBERON:0007647,1.61e-07,1;UBERON:0010115,1.61e-07,1;UBERON:0007029,1.83e-07,1;UBERON:0002079,1.95e-07,1;UBERON:0002372,3.01e-07,1;UBERON:0001961,3.01e-07,1;UBERON:0001744,3.01e-07,1;UBERON:0001735,3.01e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0.626909442956176,1.14494394852423,1.09499540058307,0.87879847716362,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,1.00267582127178,0.144846518960824,2.3858578411533,0,0.378139268656271,0,0.175669571386252,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.300476117813194,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0.35142424497814,0,0,0,0,0,0.0868836144680828,0.783204629850962,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.384417447767103,1.02341449813341,0,0,0,0,0.328508624055237,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0.290033387828457,0.255679882248303,1.06838442776085,0,0,0,0,0,0,0,1.54016790088044,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0.329607748453519,0,0.796991953004279,0,0,0,0.123084805461069,0,0,0,0,1.28236427328014,0,0,0,1.02044907978036,1.99613798001194,0,9.62059999958153,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0,1.00035336054936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0.432777279484182,0,0.0884575645033392,0.611030144933625,0.296521128680622,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0.30607276163049,1.83241080922615,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0,0.52418000472609,0,0.0967563312890851,0,0.164230914106418,0.193978032976839,0.0882561266915003,2.93774963014692,0.137041924646751,0,0.126621591911757,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0.558564802544508,0.916641696046735,0,0.199679000498991,0.429226048136571,0,0.806201669840715,0,0,0.157566364614447,0,0,0.885847333632739,0.169346664131569,0,1.22583065500418,0,0,0,0,0,0.182248669974074,0,0.236417121897595,0.367182116944987,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.226624183040251,0.879313402068495,0,1.0342636508924,0,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0.573409195690071,0.554645257684261,0.310482014706917,0.138348634936231,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,1.03018711554838,0.673498977531838,0,0,0.214441591374926,0,0,0,0,0,3.08801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0,0,0.33946505990805,0,0,3.35186950783946,0,0.0788617450012534,0,0,0,0,1.41696576325585,0.798169295285756,0,0.504143392443436,0.138314504928436,0.968853873791107,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0.202612753855184,0,0.620060389503552,0.126831620387814,0.546974809018219,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0.443511850813194,0,0.171488009437418,0.203909198930495,0.657727735628491,0,0.222462803784138,2.98273752831953,0.157115589916002,0,0,0.215927591218621,0,1.00067161847319,0,1.27865567904938,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.718639647993729,5.799072156691,1.45713297917742,0,0,0,0,0,0.150962843566674,0.154348316215889,0,11.7579324090381,0.735444965261716,2.12108892391463,0.392616934229891,0,2.113278637917,0,0.0939839179798536,0.257831551894309,0,0,0,0.160482733378337,2.19100916473955,0.458729283404541,0.716697915757256,0.315543124386369,0.475940431336403,0.436350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0,0,0,0.682008283964155,0.535928260312357,0,0.517164979309476,0.213233981900981,0.714193294391221,0.193766729508018,0.372448285775147,0,0.12729431655633,0,0.435433495793923,0.342233301085281,1.0776328482334,0.143444410785353,2.32862249582209,0.0814032686109745,0,0,0,2.34640942403454,0.1222414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| ||
|short_description=p9@TGFB3 | |short_description=p9@TGFB3 | ||
}} | }} |
Latest revision as of 04:23, 16 September 2015
Short description: | p9@TGFB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TGFB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 180bp_to_NM_003239, uc001xsc.2, uc001xsd.2_5end |
EntrezGene: | TGFB3 |
HGNC: | 11769 |
UniProt: | A5YM40B3KVH9P10600Q8WV88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.74e-09 | 3 |
peptide hormone secreting cell | 1.33e-07 | 1 |
enteroendocrine cell | 1.33e-07 | 1 |
type D enteroendocrine cell | 1.33e-07 | 1 |
somatostatin secreting cell | 1.33e-07 | 1 |
pancreatic D cell | 1.33e-07 | 1 |
progenitor cell of endocrine pancreas | 1.33e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
dura mater | 1.61e-07 | 1 |
future meninx | 1.61e-07 | 1 |
ectomeninx | 1.61e-07 | 1 |
future dura mater | 1.61e-07 | 1 |
surface | 1.83e-07 | 1 |
left cardiac atrium | 1.95e-07 | 1 |
tonsil | 3.01e-07 | 1 |
mucosa-associated lymphoid tissue | 3.01e-07 | 1 |
lymphoid tissue | 3.01e-07 | 1 |
tonsillar ring | 3.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.33e-07 | 1 |