FFCP PHASE1:Hg19::chr4:90816565..90816572,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22915 | |EntrezGene=22915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7178 | |HGNC=7178 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=442bp_to_AB385146,HQ258009_5end | |association_with_transcript=442bp_to_AB385146,HQ258009_5end | ||
|cluster_id=chr4:90816565..90816572,+ | |||
|coexpression_cluster_id=C1946 | |coexpression_cluster_id=C1946 | ||
|description=CAGE_peak_13_at_MMRN1_5end | |description=CAGE_peak_13_at_MMRN1_5end | ||
|id=chr4:90816565..90816572,+ | |id=chr4:90816565..90816572,+ | ||
|ontology_enrichment_celltype=CL:0002618!2.15e-19!3;CL:0002139!1.61e-15!24;CL:0000115!2.88e-10!35;CL:0002543!5.88e-10!6;CL:0005020!5.88e-10!6;CL:0002138!5.88e-10!6;CL:0005022!5.88e-10!6;CL:0000071!1.58e-08!18;CL:0002546!1.58e-08!18;CL:0002078!6.35e-08!44 | |ontology_enrichment_celltype=CL:0002618!2.15e-19!3;CL:0002139!1.61e-15!24;CL:0000115!2.88e-10!35;CL:0002543!5.88e-10!6;CL:0005020!5.88e-10!6;CL:0002138!5.88e-10!6;CL:0005022!5.88e-10!6;CL:0000071!1.58e-08!18;CL:0002546!1.58e-08!18;CL:0002078!6.35e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0002138;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.57e-09,6;CL:0002138,1.57e-09,6;CL:0005022,1.57e-09,6 | |||
|ontology_enrichment_development_v019=CL:0005022;1.50e-09;6 | |||
|ontology_enrichment_disease=DOID:8552!3.20e-07!1 | |ontology_enrichment_disease=DOID:8552!3.20e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002066!7.48e-12!5;UBERON:0001986!1.58e-08!18;UBERON:0004638!1.58e-08!18;UBERON:0004852!1.58e-08!18;UBERON:0001473!1.41e-07!8;UBERON:0004536!1.41e-07!8;UBERON:0006558!1.41e-07!8;UBERON:0002171!1.61e-07!1;UBERON:0006518!1.61e-07!1;UBERON:0008949!1.61e-07!1;UBERON:0000101!1.61e-07!1;UBERON:0002167!1.61e-07!1;UBERON:0001000!1.72e-07!1;UBERON:0005352!1.72e-07!1;UBERON:0002363!2.83e-07!1;UBERON:0007647!2.83e-07!1;UBERON:0010115!2.83e-07!1;UBERON:0006834!3.84e-07!1;UBERON:0000487!6.29e-07!22;UBERON:0001638!8.84e-07!9;UBERON:0003920!8.84e-07!9;UBERON:0004582!8.84e-07!9 | |ontology_enrichment_uberon=UBERON:0002066!7.48e-12!5;UBERON:0001986!1.58e-08!18;UBERON:0004638!1.58e-08!18;UBERON:0004852!1.58e-08!18;UBERON:0001473!1.41e-07!8;UBERON:0004536!1.41e-07!8;UBERON:0006558!1.41e-07!8;UBERON:0002171!1.61e-07!1;UBERON:0006518!1.61e-07!1;UBERON:0008949!1.61e-07!1;UBERON:0000101!1.61e-07!1;UBERON:0002167!1.61e-07!1;UBERON:0001000!1.72e-07!1;UBERON:0005352!1.72e-07!1;UBERON:0002363!2.83e-07!1;UBERON:0007647!2.83e-07!1;UBERON:0010115!2.83e-07!1;UBERON:0006834!3.84e-07!1;UBERON:0000487!6.29e-07!22;UBERON:0001638!8.84e-07!9;UBERON:0003920!8.84e-07!9;UBERON:0004582!8.84e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0001473;1.75e-07;8!UBERON:0004536;1.75e-07;8!UBERON:0006558;1.75e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8;UBERON:0001473,1.80e-07,8;UBERON:0004536,1.80e-07,8;UBERON:0006558,1.80e-07,8 | |||
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|short_description=p13@MMRN1 | |short_description=p13@MMRN1 | ||
}} | }} |
Latest revision as of 09:01, 19 September 2015
Short description: | p13@MMRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MMRN1_5end |
Coexpression cluster: | C1946_gastric_acute_rhabdomyosarcoma_Dendritic_Endothelial_B_Wilms |
Association with transcript: | 442bp_to_AB385146, HQ258009_5end |
EntrezGene: | MMRN1 |
HGNC: | 7178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.57e-09 | 6 |
endothelial cell of lymphatic vessel | 1.57e-09 | 6 |
vascular lymphangioblast | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
lymphatic vessel | 1.80e-07 | 8 |
lymph vasculature | 1.80e-07 | 8 |
lymphatic part of lymphoid system | 1.80e-07 | 8 |