FFCP PHASE1:Hg19::chr3:189506429..189506448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:189506429..189506448,+ | |||
|coexpression_cluster_id=C420 | |coexpression_cluster_id=C420 | ||
|description=CAGE_peak_at_chr3:189506429..189506448,+ | |description=CAGE_peak_at_chr3:189506429..189506448,+ | ||
|id=chr3:189506429..189506448,+ | |id=chr3:189506429..189506448,+ | ||
|ontology_enrichment_celltype=CL:0002573!2.05e-20!2;CL:0002623!3.01e-20!3;CL:0000622!1.50e-12!5;CL:0000154!1.30e-10!6;CL:0002535!2.67e-08!2;CL:0000150!2.29e-07!9;CL:0002251!9.31e-07!21 | |ontology_enrichment_celltype=CL:0002573!2.05e-20!2;CL:0002623!3.01e-20!3;CL:0000622!1.50e-12!5;CL:0000154!1.30e-10!6;CL:0002535!2.67e-08!2;CL:0000150!2.29e-07!9;CL:0002251!9.31e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002573;8.98e-131;2!CL:0000243;2.07e-24;15!CL:0000125;2.07e-24;15!CL:0000095;5.37e-22;17!CL:0002319;6.71e-16;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,8.98e-131,2;CL:0000243,2.07e-24,15;CL:0000125,2.07e-24,15;CL:0000030,2.07e-24,15;CL:0000339,2.07e-24,15;CL:0000095,5.37e-22,17;CL:0000123,5.37e-22,17;CL:0002319,6.71e-16,25;CL:0000333,1.77e-10,41;CL:0000133,9.44e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000339;2.07e-24;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!4.98e-23!10;UBERON:0002370!5.63e-15!4;UBERON:0005058!5.63e-15!4;UBERON:0009113!5.63e-15!4;UBERON:0003295!5.63e-15!4;UBERON:0005562!5.63e-15!4;UBERON:0001044!1.30e-10!6;UBERON:0003293!1.30e-10!6;UBERON:0003294!1.30e-10!6;UBERON:0010047!1.30e-10!6;UBERON:0000167!1.30e-10!6;UBERON:0003351!2.64e-10!6;UBERON:0000002!3.04e-10!6;UBERON:0001560!3.04e-10!6;UBERON:0004177!5.82e-09!7;UBERON:0006955!2.67e-08!2;UBERON:0004801!2.67e-08!2;UBERON:0000010!2.02e-07!8 | |ontology_enrichment_uberon=UBERON:0003408!4.98e-23!10;UBERON:0002370!5.63e-15!4;UBERON:0005058!5.63e-15!4;UBERON:0009113!5.63e-15!4;UBERON:0003295!5.63e-15!4;UBERON:0005562!5.63e-15!4;UBERON:0001044!1.30e-10!6;UBERON:0003293!1.30e-10!6;UBERON:0003294!1.30e-10!6;UBERON:0010047!1.30e-10!6;UBERON:0000167!1.30e-10!6;UBERON:0003351!2.64e-10!6;UBERON:0000002!3.04e-10!6;UBERON:0001560!3.04e-10!6;UBERON:0004177!5.82e-09!7;UBERON:0006955!2.67e-08!2;UBERON:0004801!2.67e-08!2;UBERON:0000010!2.02e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000010;9.75e-45;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,9.75e-45,8 | |||
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|short_description=p@chr3:189506429..189506448,+ | |short_description=p@chr3:189506429..189506448,+ | ||
}} | }} |
Latest revision as of 19:23, 29 July 2015
Short description: | p@chr3:189506429..189506448, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:189506429..189506448, + |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 8.98e-131 | 2 |
glial cell (sensu Vertebrata) | 2.07e-24 | 15 |
glial cell | 2.07e-24 | 15 |
glioblast | 2.07e-24 | 15 |
glioblast (sensu Vertebrata) | 2.07e-24 | 15 |
neuron associated cell | 5.37e-22 | 17 |
neuron associated cell (sensu Vertebrata) | 5.37e-22 | 17 |
neural cell | 6.71e-16 | 25 |
migratory neural crest cell | 1.77e-10 | 41 |
neurectodermal cell | 9.44e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 9.75e-45 | 8 |