FFCP PHASE1:Hg19::chr2:197124712..197124735,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000430904_5end | |association_with_transcript=-12bp_to_ENST00000430904_5end | ||
|cluster_id=chr2:197124712..197124735,+ | |||
|coexpression_cluster_id=C311 | |coexpression_cluster_id=C311 | ||
|description=CAGE_peak_2_at_ENST00000430904_5end | |description=CAGE_peak_2_at_ENST00000430904_5end | ||
|id=chr2:197124712..197124735,+ | |id=chr2:197124712..197124735,+ | ||
|ontology_enrichment_celltype=CL:0002274!7.82e-11!5;CL:0000457!7.82e-11!5;CL:0002191!7.82e-11!5;CL:0000097!7.82e-11!5;CL:0000831!7.82e-11!5;CL:0002028!7.82e-11!5;CL:0000791!4.77e-10!18;CL:0000789!4.77e-10!18;CL:0002420!4.77e-10!18;CL:0002419!4.77e-10!18;CL:0000790!4.77e-10!18;CL:0000084!1.64e-09!25;CL:0000827!1.64e-09!25;CL:0000625!1.83e-07!11 | |ontology_enrichment_celltype=CL:0002274!7.82e-11!5;CL:0000457!7.82e-11!5;CL:0002191!7.82e-11!5;CL:0000097!7.82e-11!5;CL:0000831!7.82e-11!5;CL:0002028!7.82e-11!5;CL:0000791!4.77e-10!18;CL:0000789!4.77e-10!18;CL:0002420!4.77e-10!18;CL:0002419!4.77e-10!18;CL:0000790!4.77e-10!18;CL:0000084!1.64e-09!25;CL:0000827!1.64e-09!25;CL:0000625!1.83e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000097;7.84e-36;5!CL:0000163;7.28e-20;9!CL:0002563;3.51e-08;4!CL:0000222;4.25e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.16e-36,5;CL:0002028,8.16e-36,5;CL:0000163,7.44e-20,9;CL:0002563,3.33e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.25e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.07e-07!4;UBERON:0005058!2.07e-07!4;UBERON:0009113!2.07e-07!4;UBERON:0003295!2.07e-07!4;UBERON:0005562!2.07e-07!4 | |ontology_enrichment_uberon=UBERON:0002370!2.07e-07!4;UBERON:0005058!2.07e-07!4;UBERON:0009113!2.07e-07!4;UBERON:0003295!2.07e-07!4;UBERON:0005562!2.07e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;3.39e-08;4!UBERON:0001242;3.51e-08;4!UBERON:0001262;3.51e-08;4!UBERON:0004786;3.51e-08;4!UBERON:0004808;3.51e-08;4!UBERON:0001277;3.51e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.22e-08,4;UBERON:0001242,3.33e-08,4;UBERON:0001262,3.33e-08,4;UBERON:0004786,3.33e-08,4;UBERON:0004808,3.33e-08,4;UBERON:0001277,3.33e-08,4;UBERON:0004907,9.87e-07,5 | |||
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| ||
|short_description=p2@ENST00000430904 | |short_description=p2@ENST00000430904 | ||
}} | }} |
Latest revision as of 04:37, 29 July 2015
Short description: | p2@ENST00000430904 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000430904_5end |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | -12bp_to_ENST00000430904_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.16e-36 | 5 |
basophil mast progenitor cell | 8.16e-36 | 5 |
endocrine cell | 7.44e-20 | 9 |
intestinal epithelial cell | 3.33e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 3.22e-08 | 4 |
intestinal mucosa | 3.33e-08 | 4 |
wall of intestine | 3.33e-08 | 4 |
gastrointestinal system mucosa | 3.33e-08 | 4 |
gastrointestinal system epithelium | 3.33e-08 | 4 |
intestinal epithelium | 3.33e-08 | 4 |
lower digestive tract | 9.87e-07 | 5 |