FFCP PHASE1:Hg19::chr20:46130619..46130664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8202 | |EntrezGene=8202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7670 | |HGNC=7670 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6Q9 | |UniProt=Q9Y6Q9 | ||
|association_with_transcript=0bp_to_ENST00000372004,uc002xtk.2,uc002xtl.2,uc002xtm.2,uc002xtn.2,uc010ght.1_5end | |association_with_transcript=0bp_to_ENST00000372004,uc002xtk.2,uc002xtl.2,uc002xtm.2,uc002xtn.2,uc010ght.1_5end | ||
|cluster_id=chr20:46130619..46130664,+ | |||
|coexpression_cluster_id=C4046 | |coexpression_cluster_id=C4046 | ||
|description=CAGE_peak_1_at_NCOA3_5end | |description=CAGE_peak_1_at_NCOA3_5end | ||
|id=chr20:46130619..46130664,+ | |id=chr20:46130619..46130664,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.55e-33!140;CL:0002087!1.92e-25!119;CL:0002031!4.05e-25!124;CL:0000766!8.58e-20!76;CL:0000037!3.10e-18!172;CL:0000566!3.10e-18!172;CL:0002057!4.60e-18!42;CL:0000557!9.78e-18!71;CL:0000860!1.01e-17!45;CL:0002032!2.83e-17!165;CL:0000837!2.83e-17!165;CL:0002009!6.39e-16!65;CL:0000839!1.10e-15!70;CL:0002194!1.69e-15!63;CL:0000576!1.69e-15!63;CL:0000040!1.69e-15!63;CL:0000559!1.69e-15!63;CL:0000988!2.32e-14!182;CL:0000945!3.54e-12!24;CL:0000826!3.54e-12!24;CL:0000838!2.97e-09!52;CL:0000542!3.09e-09!53;CL:0000051!3.09e-09!53;CL:0000763!7.43e-09!112;CL:0000049!7.43e-09!112;CL:0000236!8.52e-09!14;CL:0000134!3.58e-07!358 | |ontology_enrichment_celltype=CL:0000738!4.55e-33!140;CL:0002087!1.92e-25!119;CL:0002031!4.05e-25!124;CL:0000766!8.58e-20!76;CL:0000037!3.10e-18!172;CL:0000566!3.10e-18!172;CL:0002057!4.60e-18!42;CL:0000557!9.78e-18!71;CL:0000860!1.01e-17!45;CL:0002032!2.83e-17!165;CL:0000837!2.83e-17!165;CL:0002009!6.39e-16!65;CL:0000839!1.10e-15!70;CL:0002194!1.69e-15!63;CL:0000576!1.69e-15!63;CL:0000040!1.69e-15!63;CL:0000559!1.69e-15!63;CL:0000988!2.32e-14!182;CL:0000945!3.54e-12!24;CL:0000826!3.54e-12!24;CL:0000838!2.97e-09!52;CL:0000542!3.09e-09!53;CL:0000051!3.09e-09!53;CL:0000763!7.43e-09!112;CL:0000049!7.43e-09!112;CL:0000236!8.52e-09!14;CL:0000134!3.58e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.34e-14;33!CL:0002057;1.34e-14;33!CL:0000945;3.28e-12;24!CL:0000473;9.87e-12;39!CL:0000234;9.87e-12;39!CL:0000576;8.06e-11;48!CL:0000766;6.38e-09;69!CL:0002087;8.77e-09;104!CL:0000236;2.88e-08;13!CL:0000738;7.25e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.90e-33,136;CL:0002087,1.27e-25,115;CL:0002031,2.88e-25,120;CL:0000766,3.90e-20,72;CL:0000037,3.62e-18,168;CL:0000860,4.60e-18,42;CL:0002057,4.60e-18,42;CL:0000557,4.69e-18,67;CL:0000473,2.75e-17,48;CL:0000234,2.75e-17,48;CL:0002032,3.27e-17,161;CL:0000837,3.27e-17,161;CL:0002009,3.12e-16,61;CL:0000839,6.12e-16,66;CL:0002194,8.18e-16,59;CL:0000576,8.18e-16,59;CL:0000040,8.18e-16,59;CL:0000559,8.18e-16,59;CL:0000988,1.11e-14,177;CL:0000945,3.54e-12,24;CL:0000826,3.54e-12,24;CL:0000838,2.97e-09,52;CL:0000542,3.09e-09,53;CL:0000051,3.09e-09,53;CL:0000236,8.52e-09,14;CL:0000763,8.60e-09,108;CL:0000049,8.60e-09,108;CL:0000134,3.28e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.66e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.97e-17!102;UBERON:0003061!2.97e-17!102;UBERON:0002193!3.60e-16!112;UBERON:0001474!3.35e-13!86;UBERON:0002371!3.96e-13!80;UBERON:0002405!7.43e-13!115;UBERON:0004765!4.43e-10!101;UBERON:0001434!4.43e-10!101 | |ontology_enrichment_uberon=UBERON:0002390!2.97e-17!102;UBERON:0003061!2.97e-17!102;UBERON:0002193!3.60e-16!112;UBERON:0001474!3.35e-13!86;UBERON:0002371!3.96e-13!80;UBERON:0002405!7.43e-13!115;UBERON:0004765!4.43e-10!101;UBERON:0001434!4.43e-10!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.36e-17,98;UBERON:0003061,2.36e-17,98;UBERON:0002193,3.26e-16,108;UBERON:0002405,9.19e-14,93;UBERON:0001474,2.79e-13,82;UBERON:0002371,3.11e-13,76;UBERON:0004765,1.71e-11,90;UBERON:0001434,2.34e-09,100 | |||
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| ||
|short_description=p1@NCOA3 | |short_description=p1@NCOA3 | ||
}} | }} |
Latest revision as of 16:07, 16 September 2015
Short description: | p1@NCOA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCOA3_5end |
Coexpression cluster: | C4046_breast_Mast_MCF7_lymphoma_CD19_migratory_lung |
Association with transcript: | 0bp_to_ENST00000372004, uc002xtk.2, uc002xtl.2, uc002xtm.2, uc002xtn.2, uc010ght.1_5end |
EntrezGene: | NCOA3 |
HGNC: | 7670 |
UniProt: | Q9Y6Q9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.90e-33 | 136 |
nongranular leukocyte | 1.27e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 2.88e-25 | 120 |
myeloid leukocyte | 3.90e-20 | 72 |
hematopoietic stem cell | 3.62e-18 | 168 |
classical monocyte | 4.60e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.60e-18 | 42 |
granulocyte monocyte progenitor cell | 4.69e-18 | 67 |
defensive cell | 2.75e-17 | 48 |
phagocyte | 2.75e-17 | 48 |
hematopoietic oligopotent progenitor cell | 3.27e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.27e-17 | 161 |
macrophage dendritic cell progenitor | 3.12e-16 | 61 |
myeloid lineage restricted progenitor cell | 6.12e-16 | 66 |
monopoietic cell | 8.18e-16 | 59 |
monocyte | 8.18e-16 | 59 |
monoblast | 8.18e-16 | 59 |
promonocyte | 8.18e-16 | 59 |
hematopoietic cell | 1.11e-14 | 177 |
lymphocyte of B lineage | 3.54e-12 | 24 |
pro-B cell | 3.54e-12 | 24 |
lymphoid lineage restricted progenitor cell | 2.97e-09 | 52 |
lymphocyte | 3.09e-09 | 53 |
common lymphoid progenitor | 3.09e-09 | 53 |
B cell | 8.52e-09 | 14 |
myeloid cell | 8.60e-09 | 108 |
common myeloid progenitor | 8.60e-09 | 108 |
mesenchymal cell | 3.28e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.36e-17 | 98 |
blood island | 2.36e-17 | 98 |
hemolymphoid system | 3.26e-16 | 108 |
immune system | 9.19e-14 | 93 |
bone element | 2.79e-13 | 82 |
bone marrow | 3.11e-13 | 76 |
skeletal element | 1.71e-11 | 90 |
skeletal system | 2.34e-09 | 100 |