FFCP PHASE1:Hg19::chr19:58695085..58695128,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:58695085..58695128,- | |||
|coexpression_cluster_id=C1388 | |coexpression_cluster_id=C1388 | ||
|description=CAGE_peak_at_chr19:58695085..58695128,- | |description=CAGE_peak_at_chr19:58695085..58695128,- | ||
|id=chr19:58695085..58695128,- | |id=chr19:58695085..58695128,- | ||
|ontology_enrichment_celltype=CL:0002057!2.37e-29!42;CL:0000860!1.55e-26!45;CL:0000557!3.35e-25!71;CL:0000766!3.66e-25!76;CL:0002009!1.74e-22!65;CL:0000839!1.37e-21!70;CL:0002194!3.74e-21!63;CL:0000576!3.74e-21!63;CL:0000040!3.74e-21!63;CL:0000559!3.74e-21!63;CL:0000763!6.05e-17!112;CL:0000049!6.05e-17!112;CL:0000738!6.21e-15!140;CL:0002031!3.54e-12!124;CL:0000037!2.79e-11!172;CL:0000566!2.79e-11!172;CL:0002087!3.11e-11!119;CL:0002032!2.53e-10!165;CL:0000837!2.53e-10!165;CL:0000988!2.34e-09!182;CL:0000063!4.20e-09!578;CL:0000012!6.06e-09!682;CL:0002371!7.98e-09!591;CL:0000144!1.23e-08!625;CL:0000548!4.31e-08!679;CL:0000004!4.31e-08!679;CL:0000255!4.31e-08!679;CL:0000003!6.64e-08!722;CL:0000034!9.53e-08!444;CL:0000723!1.35e-07!436;CL:0000048!1.36e-07!430;CL:0002393!1.57e-07!9;CL:0002397!1.57e-07!9;CL:0000134!3.38e-07!358 | |ontology_enrichment_celltype=CL:0002057!2.37e-29!42;CL:0000860!1.55e-26!45;CL:0000557!3.35e-25!71;CL:0000766!3.66e-25!76;CL:0002009!1.74e-22!65;CL:0000839!1.37e-21!70;CL:0002194!3.74e-21!63;CL:0000576!3.74e-21!63;CL:0000040!3.74e-21!63;CL:0000559!3.74e-21!63;CL:0000763!6.05e-17!112;CL:0000049!6.05e-17!112;CL:0000738!6.21e-15!140;CL:0002031!3.54e-12!124;CL:0000037!2.79e-11!172;CL:0000566!2.79e-11!172;CL:0002087!3.11e-11!119;CL:0002032!2.53e-10!165;CL:0000837!2.53e-10!165;CL:0000988!2.34e-09!182;CL:0000063!4.20e-09!578;CL:0000012!6.06e-09!682;CL:0002371!7.98e-09!591;CL:0000144!1.23e-08!625;CL:0000548!4.31e-08!679;CL:0000004!4.31e-08!679;CL:0000255!4.31e-08!679;CL:0000003!6.64e-08!722;CL:0000034!9.53e-08!444;CL:0000723!1.35e-07!436;CL:0000048!1.36e-07!430;CL:0002393!1.57e-07!9;CL:0002397!1.57e-07!9;CL:0000134!3.38e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.27e-46;33!CL:0002057;4.27e-46;33!CL:0000576;1.22e-33;48!CL:0000473;4.39e-33;39!CL:0000234;4.39e-33;39!CL:0000766;3.91e-28;69!CL:0000763;2.10e-12;100!CL:0002393;7.87e-11;6!CL:0002397;7.87e-11;6!CL:0002087;8.20e-10;104!CL:0000738;6.01e-09;136!CL:0000094;2.49e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.03e-65,42;CL:0002057,5.03e-65,42;CL:0000473,1.82e-57,48;CL:0000234,1.82e-57,48;CL:0000766,1.71e-53,72;CL:0000557,7.89e-52,67;CL:0002009,6.57e-46,61;CL:0000839,2.58e-45,66;CL:0002194,6.99e-43,59;CL:0000576,6.99e-43,59;CL:0000040,6.99e-43,59;CL:0000559,6.99e-43,59;CL:0000763,1.11e-37,108;CL:0000049,1.11e-37,108;CL:0000738,8.82e-35,136;CL:0002031,7.26e-30,120;CL:0000037,1.05e-28,168;CL:0002032,2.75e-27,161;CL:0000837,2.75e-27,161;CL:0002087,3.49e-26,115;CL:0000988,3.51e-26,177;CL:0000134,3.36e-15,354;CL:0002393,4.02e-15,9;CL:0002397,4.02e-15,9;CL:0002320,1.97e-14,361;CL:0000034,1.96e-13,441;CL:0000723,5.32e-13,433;CL:0000048,5.70e-13,427;CL:0000219,9.19e-12,386;CL:0000094,3.24e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.48e-46;42!CL:0000049;1.57e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.22e-23!80;UBERON:0001474!1.09e-21!86;UBERON:0004765!3.19e-19!101;UBERON:0001434!3.19e-19!101;UBERON:0002390!8.29e-17!102;UBERON:0003061!8.29e-17!102;UBERON:0002193!5.74e-15!112;UBERON:0003081!5.12e-14!216;UBERON:0002204!5.73e-14!167;UBERON:0002405!8.00e-13!115 | |ontology_enrichment_uberon=UBERON:0002371!2.22e-23!80;UBERON:0001474!1.09e-21!86;UBERON:0004765!3.19e-19!101;UBERON:0001434!3.19e-19!101;UBERON:0002390!8.29e-17!102;UBERON:0003061!8.29e-17!102;UBERON:0002193!5.74e-15!112;UBERON:0003081!5.12e-14!216;UBERON:0002204!5.73e-14!167;UBERON:0002405!8.00e-13!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.08e-45,76;UBERON:0001474,4.11e-41,82;UBERON:0002390,1.95e-36,98;UBERON:0003061,1.95e-36,98;UBERON:0004765,5.77e-36,90;UBERON:0002405,7.61e-36,93;UBERON:0001434,2.16e-33,100;UBERON:0002193,1.92e-31,108;UBERON:0003081,1.10e-24,203;UBERON:0002204,9.86e-21,167;UBERON:0002384,2.16e-13,371;UBERON:0000926,2.78e-11,315;UBERON:0004120,2.78e-11,315;UBERON:0006603,2.78e-11,315 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0.446961094427288,0,2.53299878168311,0,0,0,2.79120467188971,0.436882744260345,0.527533956456907,0,0,2.01697543935533,0.602694528023977,0.730310090387373,0,0,0.204000691244253,0,0,0.410623275218653,0.251085279189606,0,0,0,6.68719270643137,2.30297638858328,6.19264493264304,1.83884244895785,1.50602959389125,0.739508020333575,0,0,2.05520307534393,15.5118714388926,13.6370224279696,17.3608696572681,0,0,0,1.74477886535478,1.13362783106643,1.69808842831471,6.74044207026485,6.57868620834921,2.78735733805593,6.61692502340946,9.22178543504762,7.33094912654614,16.2030469946211,5.80936215225443,10.8341189275473,3.76484679085209,3.27487380069415,3.37085226667627,12.549439587207,7.70229664982625,11.5080682643827,2.30895910130701,4.9865914405408,2.55734850319616,17.7027635563436,15.3194010666608,6.85104473895132,7.28621129244555,5.73631210262222,5.42972111762792,12.7133895553007,7.36555271975129,9.17740923578565,3.80259515361495,5.31510749912609,2.93522103711726,7.18903239337569,6.75796017786778,2.25015821375912,9.69043328720245,2.98375015798635,2.37463399894024,0,0,0,0,0,0,0.661044872784862,0,3.41527781465669,0.587237189370939,2.29363936875137,2.64342657158052,1.68152568894461,0.526768169550154,0.786839080455332,1.57204305099666,0.616804496998528,0.334372990781356,0.32592226663359,0,0,0.111410456885174,0.589211814949674,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0.226618685395132,1.91610246800961,1.37450978193052,0,0,0.651083453856419,0,0.150575119077773,0,0,0,0.821127996921047,0.604820229674197,2.94184215361858,1.15859523106239,0,1.34140171940727,0,0,0,0,0,2.43317435151318,0,0.221729397462564,0.175669571386252,0.0654895377488563,0.364295288292542,0.370784442784429,0.324547393654683,0.696518949197069,0.26591592103773,0.953962497221368,0,0.74291500265913,1.39133685156694,0.860234595106124,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0.35576626268671,0,0.402829317109147,1.52054421143703,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0.732806975721629,5.27121669744253,0,0,0,0.633152558322899,1.58891016975863,1.14734648299525,0.709336764396714,0,1.06748995729705,0,0,0.67355336034844,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0.485618833104395,0.842704840213491,0,0.245668634623536,0.103325781175765,0,0,0,0.718618141816238,0.336672227908132,0.375355559615893,0,0.438977620880838,1.5324389789951,0,0.453728732640084,1.4351170855109,0,0.635795703478686,2.70081986475962,0,2.31876486041066,0,0.168776332241266,0.0974370051611986,2.77677151668526,0.184099797284599,0,1.42003837006646,0,0.847802961552438,0.386521706326594,0.272746120590835,0.573609190778008,0.121973706129595,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0.928735856063958,1.44375896333917,0.118306800039844,0,0.241011029883482,0.330881918197182,0,0.237270619111097,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0.343135620597051,0,2.24803506515239,0.301586917234893,0.555530670951178,0.325808305310325,0,1.44331342025273,0,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,1.58040879591855,0.858486162094873,0,0.234004265139238,0,0,0.335964256397719,0.141775097242386,0,0,0.383382679165211,1.97065295158377,0.088048434013226,2.69526550203004,5.6206781832615,5.0496973370552,0.063497894292169,0.381988425558278,0,0,0,0,0,0.224262168690721,0,0.36669142910475,0,3.57656445851882,0,0,0,0.514414748524284,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0,0,2.37585561880029,0.301439377059586,0,0.499864955910285,1.2162378064119,0.502257091432126,0,0,0,0,0.434343920002738,0.821905290201534,0.358121926479791,0,1.57624608161542,0.646882724578552,1.15508732651774,0,0,0,0,0,2.24702107184155,0,3.72973962092432,0,0,0,0.623912584592421,0.356857977594324,1.26161932027148,0.35142424497814,0,2.27407504055985,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0.82707210449155,4.31428401637234,2.56146138728266,1.81876542867756,0,1.5119514666484,0,1.38115775959256,0,0,0,0,0,0,0,0.492762936082855,0,0.813472649219715,0,0.802025881213139,0.460404944679482,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.510281115829547,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.309123034943167,0,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0.307007349452259,0.551346289938122,0.107420244868274,0.290033387828457,0.340906509664404,0,0.330569830721956,1.15314040419064,0.893288987462089,1.11273558941105,0,1.5740617341532,0,1.84820148105653,0.532306030317022,0,0.37064843820784,0.429374660225974,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0,0,0.235624804691373,0.404364963146632,1.58510321173008,0.421258456238981,0,1.46228093778771,1.05650146756755,0,0.141405431953713,1.13008116620243,0,0,1.75380354101505,0,0,0,0.30982349809975,0.281695602532241,0.143411352204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| ||
|short_description=p@chr19:58695085..58695128,- | |short_description=p@chr19:58695085..58695128,- | ||
}} | }} |
Latest revision as of 17:54, 27 July 2015
Short description: | p@chr19:58695085..58695128, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:58695085..58695128, - |
Coexpression cluster: | C1388_immature_CD14_Basophils_Mast_CD133_Peripheral_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.08e-45 | 76 |
bone element | 4.11e-41 | 82 |
hematopoietic system | 1.95e-36 | 98 |
blood island | 1.95e-36 | 98 |
skeletal element | 5.77e-36 | 90 |
immune system | 7.61e-36 | 93 |
skeletal system | 2.16e-33 | 100 |
hemolymphoid system | 1.92e-31 | 108 |
lateral plate mesoderm | 1.10e-24 | 203 |
musculoskeletal system | 9.86e-21 | 167 |
connective tissue | 2.16e-13 | 371 |
mesoderm | 2.78e-11 | 315 |
mesoderm-derived structure | 2.78e-11 | 315 |
presumptive mesoderm | 2.78e-11 | 315 |