FFCP PHASE1:Hg19::chr14:53162285..53162297,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30001 | |EntrezGene=30001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13280 | |HGNC=13280 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5B3,G3V503 | |UniProt=G3V5B3,G3V503 | ||
|association_with_transcript=-38bp_to_ENST00000554251,ENST00000556223_5end | |association_with_transcript=-38bp_to_ENST00000554251,ENST00000556223_5end | ||
|cluster_id=chr14:53162285..53162297,- | |||
|coexpression_cluster_id=C3431 | |coexpression_cluster_id=C3431 | ||
|description=CAGE_peak_5_at_ERO1L_5end | |description=CAGE_peak_5_at_ERO1L_5end | ||
|id=chr14:53162285..53162297,- | |id=chr14:53162285..53162297,- | ||
|ontology_enrichment_celltype=CL:0002371!7.80e-11!591;CL:0000548!3.68e-09!679;CL:0000004!3.68e-09!679;CL:0000255!3.68e-09!679;CL:0000144!4.77e-09!625;CL:0000012!4.89e-09!682;CL:0000192!6.87e-09!42;CL:0000514!6.87e-09!42;CL:0000359!4.08e-08!32;CL:0000723!3.48e-07!436;CL:0000034!3.76e-07!444;CL:0000680!4.10e-07!57;CL:0000056!4.10e-07!57;CL:0000355!4.10e-07!57;CL:0000048!7.35e-07!430;CL:0000063!9.93e-07!578 | |ontology_enrichment_celltype=CL:0002371!7.80e-11!591;CL:0000548!3.68e-09!679;CL:0000004!3.68e-09!679;CL:0000255!3.68e-09!679;CL:0000144!4.77e-09!625;CL:0000012!4.89e-09!682;CL:0000192!6.87e-09!42;CL:0000514!6.87e-09!42;CL:0000359!4.08e-08!32;CL:0000723!3.48e-07!436;CL:0000034!3.76e-07!444;CL:0000680!4.10e-07!57;CL:0000056!4.10e-07!57;CL:0000355!4.10e-07!57;CL:0000048!7.35e-07!430;CL:0000063!9.93e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.68e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.63e-09,32;CL:0000192,1.62e-08,43;CL:0000514,1.62e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.76e-09!14 | |ontology_enrichment_disease=DOID:2394!4.76e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.14e-11;14!DOID:120;5.03e-08;27!DOID:193;1.51e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.98e-11,14;DOID:120,6.12e-08,27;DOID:193,2.12e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000926!4.23e-07!448;UBERON:0004120!4.23e-07!448;UBERON:0006603!4.23e-07!448;UBERON:0004573!5.95e-07!33;UBERON:0004571!5.95e-07!33;UBERON:0000486!6.37e-07!82 | |ontology_enrichment_uberon=UBERON:0000926!4.23e-07!448;UBERON:0004120!4.23e-07!448;UBERON:0006603!4.23e-07!448;UBERON:0004573!5.95e-07!33;UBERON:0004571!5.95e-07!33;UBERON:0000486!6.37e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.78e-07;33!UBERON:0004571;4.78e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.88e-08,33;UBERON:0004571,3.88e-08,33;UBERON:0001637,1.31e-07,42;UBERON:0003509,1.31e-07,42;UBERON:0004572,1.31e-07,42 | |||
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| ||
|short_description=p5@ERO1L | |short_description=p5@ERO1L | ||
}} | }} |
Latest revision as of 06:50, 20 September 2015
Short description: | p5@ERO1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ERO1L_5end |
Coexpression cluster: | C3431_Small_Smooth_Prostate_esophagus_Urothelial_Gingival_renal |
Association with transcript: | -38bp_to_ENST00000554251, ENST00000556223_5end |
EntrezGene: | ERO1L |
HGNC: | 13280 |
UniProt: | G3V5B3G3V503 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.63e-09 | 32 |
smooth muscle cell | 1.62e-08 | 43 |
smooth muscle myoblast | 1.62e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 3.88e-08 | 33 |
systemic arterial system | 3.88e-08 | 33 |
artery | 1.31e-07 | 42 |
arterial blood vessel | 1.31e-07 | 42 |
arterial system | 1.31e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.98e-11 | 14 |
female reproductive organ cancer | 6.12e-08 | 27 |
reproductive organ cancer | 2.12e-07 | 29 |