FFCP PHASE1:Hg19::chrY:14570425..14570428,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrY:14570425..14570428,+ | |||
|description=CAGE_peak_at_chrY:14570425..14570428,+ | |description=CAGE_peak_at_chrY:14570425..14570428,+ | ||
|id=chrY:14570425..14570428,+ | |id=chrY:14570425..14570428,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000817;5.16e-21;1!CL:1001319;5.16e-21;1!CL:1000600;5.16e-21;1!CL:0000945;4.86e-08;24!CL:0000322;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,4.22e-21,1;CL:1000600,4.22e-21,1;CL:0000945,5.36e-08,24;CL:0000826,5.36e-08,24;CL:0000322,7.76e-08,3;CL:0000817,8.29e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.11e-15!239;DOID:162!6.81e-14!235;DOID:2531!3.80e-08!51;DOID:0060083!3.80e-08!51;DOID:0050687!4.46e-08!143;DOID:0050686!5.82e-07!137 | |ontology_enrichment_disease=DOID:14566!2.11e-15!239;DOID:162!6.81e-14!235;DOID:2531!3.80e-08!51;DOID:0060083!3.80e-08!51;DOID:0050687!4.46e-08!143;DOID:0050686!5.82e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:2355;5.16e-21;1!DOID:1325;2.98e-12;7!DOID:3904;2.98e-12;7!DOID:74;3.34e-11;2!DOID:3910;3.34e-11;2!DOID:1036;5.98e-11;8!DOID:0060058;7.36e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,5.16e-21,1;DOID:1325,2.98e-12,7;DOID:3904,2.98e-12,7;DOID:74,3.35e-11,2;DOID:3910,4.09e-11,2;DOID:1036,5.15e-11,8;DOID:2531,7.83e-10,51;DOID:0060083,7.83e-10,51;DOID:0060058,7.66e-09,10;DOID:0050686,9.32e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0003343!2.11e-09!4;UBERON:0004785!2.11e-09!4;UBERON:0003729!1.35e-07!5 | |ontology_enrichment_uberon=UBERON:0003343!2.11e-09!4;UBERON:0004785!2.11e-09!4;UBERON:0003729!1.35e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;5.16e-21;1!UBERON:0001256;5.16e-21;1!UBERON:0001259;5.16e-21;1!UBERON:0001255;3.34e-11;2!UBERON:0004903;3.34e-11;2!UBERON:0001556;3.34e-11;2!UBERON:0002173;3.34e-11;2!UBERON:0002186;3.34e-11;2!UBERON:0004821;6.78e-08;3!UBERON:0007499;6.78e-08;3!UBERON:0003215;6.78e-08;3!UBERON:0010368;6.78e-08;3!UBERON:0009911;6.78e-08;3!UBERON:0002299;6.78e-08;3!UBERON:0006524;6.78e-08;3!UBERON:0008874;6.78e-08;3!UBERON:0002169;6.78e-08;3!UBERON:0004894;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,4.22e-21,1;UBERON:0001256,4.22e-21,1;UBERON:0001259,4.22e-21,1;UBERON:0001255,3.02e-11,2;UBERON:0001556,3.02e-11,2;UBERON:0004903,4.09e-11,2;UBERON:0002173,4.09e-11,2;UBERON:0002186,4.09e-11,2;UBERON:0004821,7.76e-08,3;UBERON:0003215,7.76e-08,3;UBERON:0010368,7.76e-08,3;UBERON:0009911,7.76e-08,3;UBERON:0002299,7.76e-08,3;UBERON:0006524,7.76e-08,3;UBERON:0008874,7.76e-08,3;UBERON:0002169,7.76e-08,3;UBERON:0004894,7.76e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08454080812422,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99107399156925,0,0,0.371606350251437,1.00988449083511,0,0.956557636372934,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,1.01701460117107,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.325942115766024,0,0,0,0,0,0.166211681900156,0,0,0,0,2.06617552674492,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.685209623233754,0,0,0,0,0,0,0,0.114536596165916,0.514784993585894,0,0,0,0.407712618220842,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,1.1007533168552,0,0,0.803765742325096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39557285273876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,2.00548529691159,0.733714394086716,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,1.13964576055364,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08454080812422,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99107399156925,0,0,0.371606350251437,1.00988449083511,0,0.956557636372934,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,1.01701460117107,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.325942115766024,0,0,0,0,0,0.166211681900156,0,0,0,0,2.06617552674492,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.685209623233754,0,0,0,0,0,0,0,0.114536596165916,0.514784993585894,0,0,0,0.407712618220842,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,1.1007533168552,0,0,0.803765742325096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39557285273876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,2.00548529691159,0.733714394086716,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,1.13964576055364,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chrY:14570425..14570428,+ | |short_description=p@chrY:14570425..14570428,+ | ||
}} | }} |
Latest revision as of 10:00, 1 August 2015
Short description: | p@chrY:14570425..14570428, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrY:14570425..14570428, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 4.22e-21 | 1 |
lower urinary tract cell | 4.22e-21 | 1 |
lymphocyte of B lineage | 5.36e-08 | 24 |
pro-B cell | 5.36e-08 | 24 |
pneumocyte | 7.76e-08 | 3 |
precursor B cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 4.22e-21 | 1 |
wall of urinary bladder | 4.22e-21 | 1 |
mucosa of urinary bladder | 4.22e-21 | 1 |
urinary bladder | 3.02e-11 | 2 |
lower urinary tract | 3.02e-11 | 2 |
bronchoalveolar duct junction | 4.09e-11 | 2 |
alveolar duct | 4.09e-11 | 2 |
bronchiole | 4.09e-11 | 2 |
pulmonary alveolus epithelium | 7.76e-08 | 3 |
alveolus | 7.76e-08 | 3 |
pulmonary lobule | 7.76e-08 | 3 |
lobule | 7.76e-08 | 3 |
alveolus of lung | 7.76e-08 | 3 |
alveolar system | 7.76e-08 | 3 |
pulmonary acinus | 7.76e-08 | 3 |
alveolar sac | 7.76e-08 | 3 |
alveolar wall | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 5.16e-21 | 1 |
bronchus cancer | 2.98e-12 | 7 |
bronchogenic carcinoma | 2.98e-12 | 7 |
hematopoietic system disease | 3.35e-11 | 2 |
lung adenocarcinoma | 4.09e-11 | 2 |
chronic leukemia | 5.15e-11 | 8 |
hematologic cancer | 7.83e-10 | 51 |
immune system cancer | 7.83e-10 | 51 |
lymphoma | 7.66e-09 | 10 |
organ system cancer | 9.32e-07 | 137 |