FFCP PHASE1:Hg19::chr1:218521634..218521641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:218521634..218521641,+ | |||
|description=CAGE_peak_at_chr1:218521634..218521641,+ | |description=CAGE_peak_at_chr1:218521634..218521641,+ | ||
|id=chr1:218521634..218521641,+ | |id=chr1:218521634..218521641,+ | ||
|ontology_enrichment_celltype=CL:0000359!7.21e-17!32;CL:0000183!1.37e-16!59;CL:0000192!3.27e-15!42;CL:0000514!3.27e-15!42;CL:0000187!9.05e-15!54;CL:0000680!1.33e-14!57;CL:0000056!1.33e-14!57;CL:0000355!1.33e-14!57;CL:0000393!2.65e-14!60;CL:0000211!2.65e-14!60;CL:0000055!8.05e-14!180;CL:0000222!6.14e-13!119;CL:0000220!1.13e-12!246;CL:0002321!3.19e-12!248 | |ontology_enrichment_celltype=CL:0000359!7.21e-17!32;CL:0000183!1.37e-16!59;CL:0000192!3.27e-15!42;CL:0000514!3.27e-15!42;CL:0000187!9.05e-15!54;CL:0000680!1.33e-14!57;CL:0000056!1.33e-14!57;CL:0000355!1.33e-14!57;CL:0000393!2.65e-14!60;CL:0000211!2.65e-14!60;CL:0000055!8.05e-14!180;CL:0000222!6.14e-13!119;CL:0000220!1.13e-12!246;CL:0002321!3.19e-12!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.72e-21;32!CL:0000192;6.72e-13;43!CL:0000187;3.41e-07;55!CL:0000393;4.86e-07;61!CL:0000211;4.86e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.34e-22,32;CL:0000192,1.11e-16,43;CL:0000514,1.11e-16,43;CL:0000187,2.65e-14,55;CL:0000222,1.40e-13,121;CL:0000680,4.49e-13,58;CL:0000056,4.49e-13,58;CL:0000355,4.49e-13,58;CL:0000393,6.47e-13,61;CL:0000211,6.47e-13,61;CL:0002321,2.48e-10,250 | |||
|ontology_enrichment_development_v019=CL:0000514;6.72e-13;43!CL:0000355;7.01e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002049;2.25e-10;75!UBERON:0007798;2.25e-10;75!UBERON:0004573;7.43e-10;33!UBERON:0004571;7.43e-10;33!UBERON:0001637;7.64e-10;42!UBERON:0003509;7.64e-10;42!UBERON:0004572;7.64e-10;42!UBERON:0006876;1.61e-09;11!UBERON:0007625;5.69e-09;11!UBERON:0000055;1.58e-08;65!UBERON:0007500;3.61e-07;56!UBERON:0001981;3.61e-07;56!UBERON:0004537;3.61e-07;56!UBERON:0010371;4.82e-07;31!UBERON:0003914;5.55e-07;74 | |||
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| ||
|short_description=p@chr1:218521634..218521641,+ | |short_description=p@chr1:218521634..218521641,+ | ||
}} | }} |
Latest revision as of 03:58, 28 July 2015
Short description: | p@chr1:218521634..218521641, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:218521634..218521641, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.34e-22 | 32 |
smooth muscle cell | 1.11e-16 | 43 |
smooth muscle myoblast | 1.11e-16 | 43 |
muscle cell | 2.65e-14 | 55 |
mesodermal cell | 1.40e-13 | 121 |
muscle precursor cell | 4.49e-13 | 58 |
myoblast | 4.49e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.49e-13 | 58 |
electrically responsive cell | 6.47e-13 | 61 |
electrically active cell | 6.47e-13 | 61 |
embryonic cell | 2.48e-10 | 250 |