FFCP PHASE1:Hg19::chr19:3557989..3557998,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126321 | |EntrezGene=126321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28299 | |HGNC=28299 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NUT3,E9PAJ8,A8MXP7 | |UniProt=Q6NUT3,E9PAJ8,A8MXP7 | ||
|association_with_transcript=-418bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | |association_with_transcript=-418bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | ||
|cluster_id=chr19:3557989..3557998,- | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_10_at_MFSD12_5end | |description=CAGE_peak_10_at_MFSD12_5end | ||
|id=chr19:3557989..3557998,- | |id=chr19:3557989..3557998,- | ||
|ontology_enrichment_celltype=CL:0000148!5.10e-45!10;CL:0000541!5.10e-45!10;CL:0000147!5.46e-32!14;CL:0002567!5.59e-29!3;CL:0002150!2.48e-28!3;CL:0000861!2.48e-28!3;CL:0000710!3.37e-22!20;CL:0000075!2.90e-16!27;CL:0002077!3.57e-13!33;CL:0000325!4.95e-11!39;CL:0002566!9.84e-11!1;CL:0000333!6.18e-10!41;CL:0000235!6.67e-09!10;CL:0000133!8.95e-07!59 | |ontology_enrichment_celltype=CL:0000148!5.10e-45!10;CL:0000541!5.10e-45!10;CL:0000147!5.46e-32!14;CL:0002567!5.59e-29!3;CL:0002150!2.48e-28!3;CL:0000861!2.48e-28!3;CL:0000710!3.37e-22!20;CL:0000075!2.90e-16!27;CL:0002077!3.57e-13!33;CL:0000325!4.95e-11!39;CL:0002566!9.84e-11!1;CL:0000333!6.18e-10!41;CL:0000235!6.67e-09!10;CL:0000133!8.95e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.71e-71;10!CL:0002567;1.62e-60;3!CL:0000147;5.29e-51;14!CL:0000710;9.19e-36;20!CL:0000075;1.59e-26;27!CL:0002566;4.22e-21;1!CL:0002077;6.71e-18;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.71e-71,10;CL:0000541,2.71e-71,10;CL:0002567,1.62e-60,3;CL:0000147,5.29e-51,14;CL:0000710,9.19e-36,20;CL:0000075,1.59e-26,27;CL:0002566,3.45e-21,1;CL:0002077,4.44e-21,34;CL:0000333,1.13e-16,41;CL:0000133,9.69e-12,59;CL:0000221,1.17e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000133;1.73e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!6.53e-19!2 | |ontology_enrichment_disease=DOID:1909!6.53e-19!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;4.09e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.52e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.08e-25!9;UBERON:0001557!1.77e-16!19;UBERON:0001301!3.61e-10!1 | |ontology_enrichment_uberon=UBERON:0001737!9.08e-25!9;UBERON:0001557!1.77e-16!19;UBERON:0001301!3.61e-10!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p10@MFSD12 | |short_description=p10@MFSD12 | ||
}} | }} |
Latest revision as of 09:45, 17 September 2015
Short description: | p10@MFSD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MFSD12_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -418bp_to_ENST00000355415, ENST00000389395, ENST00000398558, NM_001042680, NM_021731, NM_174983, uc002lxw.2, uc002lxx.2, uc002lxz.2_5end |
EntrezGene: | MFSD12 |
HGNC: | 28299 |
UniProt: | Q6NUT3E9PAJ8A8MXP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.71e-71 | 10 |
melanoblast | 2.71e-71 | 10 |
light melanocyte | 1.62e-60 | 3 |
pigment cell | 5.29e-51 | 14 |
neurecto-epithelial cell | 9.19e-36 | 20 |
columnar/cuboidal epithelial cell | 1.59e-26 | 27 |
dark melanocyte | 3.45e-21 | 1 |
ecto-epithelial cell | 4.44e-21 | 34 |
migratory neural crest cell | 1.13e-16 | 41 |
neurectodermal cell | 9.69e-12 | 59 |
ectodermal cell | 1.17e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.52e-11 | 2 |