FFCP PHASE1:Hg19::chr11:78112655..78112670,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:78112655..78112670,- | |||
|coexpression_cluster_id=C192 | |coexpression_cluster_id=C192 | ||
|description=CAGE_peak_at_chr11:78112655..78112670,- | |description=CAGE_peak_at_chr11:78112655..78112670,- | ||
|id=chr11:78112655..78112670,- | |id=chr11:78112655..78112670,- | ||
|ontology_enrichment_celltype=CL:0002057!1.63e-20!42;CL:0000860!2.09e-18!45;CL:0000766!2.31e-18!76;CL:0000557!1.32e-15!71;CL:0002009!5.36e-15!65;CL:0000839!7.82e-15!70;CL:0002194!1.27e-14!63;CL:0000576!1.27e-14!63;CL:0000040!1.27e-14!63;CL:0000559!1.27e-14!63;CL:0000763!7.35e-14!112;CL:0000049!7.35e-14!112;CL:0000738!2.35e-13!140;CL:0000037!1.17e-11!172;CL:0000566!1.17e-11!172;CL:0002393!1.86e-11!9;CL:0002397!1.86e-11!9;CL:0002087!3.82e-11!119;CL:0000988!4.99e-11!182;CL:0002032!8.48e-11!165;CL:0000837!8.48e-11!165;CL:0002031!1.65e-10!124 | |ontology_enrichment_celltype=CL:0002057!1.63e-20!42;CL:0000860!2.09e-18!45;CL:0000766!2.31e-18!76;CL:0000557!1.32e-15!71;CL:0002009!5.36e-15!65;CL:0000839!7.82e-15!70;CL:0002194!1.27e-14!63;CL:0000576!1.27e-14!63;CL:0000040!1.27e-14!63;CL:0000559!1.27e-14!63;CL:0000763!7.35e-14!112;CL:0000049!7.35e-14!112;CL:0000738!2.35e-13!140;CL:0000037!1.17e-11!172;CL:0000566!1.17e-11!172;CL:0002393!1.86e-11!9;CL:0002397!1.86e-11!9;CL:0002087!3.82e-11!119;CL:0000988!4.99e-11!182;CL:0002032!8.48e-11!165;CL:0000837!8.48e-11!165;CL:0002031!1.65e-10!124 | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.95e-34;3!CL:0000094;1.24e-22;8!CL:0002393;1.85e-17;6!CL:0002397;1.85e-17;6!CL:0000081;1.51e-16;11!CL:0000766;6.97e-16;69!CL:0000860;7.93e-15;33!CL:0002057;7.93e-15;33!CL:0000576;1.08e-14;48!CL:0000473;4.91e-14;39!CL:0000234;4.91e-14;39!CL:0000763;1.05e-08;100!CL:0000738;2.98e-07;136!CL:0000771;9.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.39e-34,3;CL:0000766,3.60e-32,72;CL:0000473,2.08e-26,48;CL:0000234,2.08e-26,48;CL:0000860,4.85e-25,42;CL:0002057,4.85e-25,42;CL:0000094,1.17e-22,8;CL:0000763,6.70e-21,108;CL:0000049,6.70e-21,108;CL:0002194,7.67e-21,59;CL:0000576,7.67e-21,59;CL:0000040,7.67e-21,59;CL:0000559,7.67e-21,59;CL:0002009,4.01e-20,61;CL:0000738,1.21e-18,136;CL:0000839,1.64e-18,66;CL:0000557,3.22e-18,67;CL:0000081,1.45e-16,11;CL:0000037,1.04e-14,168;CL:0000988,7.43e-14,177;CL:0002032,2.17e-13,161;CL:0000837,2.17e-13,161;CL:0002087,4.47e-12,115;CL:0002393,7.57e-12,9;CL:0002397,7.57e-12,9;CL:0002031,1.43e-09,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-20;42!UBERON:0005425;3.08e-12;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.19e-15!102;UBERON:0003061!2.19e-15!102;UBERON:0002193!3.30e-15!112;UBERON:0002371!1.86e-12!80;UBERON:0001474!2.12e-11!86;UBERON:0002405!1.84e-09!115;UBERON:0004765!2.31e-09!101;UBERON:0001434!2.31e-09!101;UBERON:0007023!2.52e-09!115;UBERON:0001893!8.94e-08!34;UBERON:0002791!2.18e-07!33;UBERON:0002020!4.99e-07!34;UBERON:0003528!4.99e-07!34;UBERON:0001049!8.13e-07!57;UBERON:0005068!8.13e-07!57;UBERON:0006241!8.13e-07!57;UBERON:0007135!8.13e-07!57 | |ontology_enrichment_uberon=UBERON:0002390!2.19e-15!102;UBERON:0003061!2.19e-15!102;UBERON:0002193!3.30e-15!112;UBERON:0002371!1.86e-12!80;UBERON:0001474!2.12e-11!86;UBERON:0002405!1.84e-09!115;UBERON:0004765!2.31e-09!101;UBERON:0001434!2.31e-09!101;UBERON:0007023!2.52e-09!115;UBERON:0001893!8.94e-08!34;UBERON:0002791!2.18e-07!33;UBERON:0002020!4.99e-07!34;UBERON:0003528!4.99e-07!34;UBERON:0001049!8.13e-07!57;UBERON:0005068!8.13e-07!57;UBERON:0006241!8.13e-07!57;UBERON:0007135!8.13e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.08e-12;1!UBERON:0001785;3.08e-12;1!UBERON:0002464;3.08e-12;1!UBERON:0004904;3.08e-12;1!UBERON:0001021;3.08e-12;1!UBERON:0003714;9.53e-07;2!UBERON:0005162;9.53e-07;2!UBERON:0000122;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.81e-17,98;UBERON:0003061,4.81e-17,98;UBERON:0002371,6.46e-16,76;UBERON:0002193,2.58e-15,108;UBERON:0001474,1.17e-14,82;UBERON:0004765,3.09e-13,90;UBERON:0002405,9.15e-13,93;UBERON:0000941,3.45e-12,1;UBERON:0001785,3.45e-12,1;UBERON:0002464,3.45e-12,1;UBERON:0004904,3.45e-12,1;UBERON:0001021,3.45e-12,1;UBERON:0003902,3.45e-12,1;UBERON:0005425,3.45e-12,1;UBERON:0001434,8.95e-12,100;UBERON:0003081,2.68e-07,203 | |||
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| ||
|short_description=p@chr11:78112655..78112670,- | |short_description=p@chr11:78112655..78112670,- | ||
}} | }} |
Latest revision as of 02:50, 24 July 2015
Short description: | p@chr11:78112655..78112670, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:78112655..78112670, - |
Coexpression cluster: | C192_Neutrophils_CD14_Peripheral_Eosinophils_CD8_Natural_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.39e-34 | 3 |
myeloid leukocyte | 3.60e-32 | 72 |
defensive cell | 2.08e-26 | 48 |
phagocyte | 2.08e-26 | 48 |
classical monocyte | 4.85e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.85e-25 | 42 |
granulocyte | 1.17e-22 | 8 |
myeloid cell | 6.70e-21 | 108 |
common myeloid progenitor | 6.70e-21 | 108 |
monopoietic cell | 7.67e-21 | 59 |
monocyte | 7.67e-21 | 59 |
monoblast | 7.67e-21 | 59 |
promonocyte | 7.67e-21 | 59 |
macrophage dendritic cell progenitor | 4.01e-20 | 61 |
leukocyte | 1.21e-18 | 136 |
myeloid lineage restricted progenitor cell | 1.64e-18 | 66 |
granulocyte monocyte progenitor cell | 3.22e-18 | 67 |
blood cell | 1.45e-16 | 11 |
hematopoietic stem cell | 1.04e-14 | 168 |
hematopoietic cell | 7.43e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.17e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-13 | 161 |
nongranular leukocyte | 4.47e-12 | 115 |
intermediate monocyte | 7.57e-12 | 9 |
CD14-positive, CD16-positive monocyte | 7.57e-12 | 9 |
hematopoietic lineage restricted progenitor cell | 1.43e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.81e-17 | 98 |
blood island | 4.81e-17 | 98 |
bone marrow | 6.46e-16 | 76 |
hemolymphoid system | 2.58e-15 | 108 |
bone element | 1.17e-14 | 82 |
skeletal element | 3.09e-13 | 90 |
immune system | 9.15e-13 | 93 |
cranial nerve II | 3.45e-12 | 1 |
cranial nerve | 3.45e-12 | 1 |
nerve trunk | 3.45e-12 | 1 |
nerve connecting eye with brain | 3.45e-12 | 1 |
nerve | 3.45e-12 | 1 |
retinal neural layer | 3.45e-12 | 1 |
presumptive neural retina | 3.45e-12 | 1 |
skeletal system | 8.95e-12 | 100 |
lateral plate mesoderm | 2.68e-07 | 203 |