FFCP PHASE1:Hg19::chr16:23502624..23502628,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:23502624..23502628,- | |||
|coexpression_cluster_id=C1634 | |coexpression_cluster_id=C1634 | ||
|description=CAGE_peak_at_chr16:23502624..23502628,- | |description=CAGE_peak_at_chr16:23502624..23502628,- | ||
|id=chr16:23502624..23502628,- | |id=chr16:23502624..23502628,- | ||
|ontology_enrichment_celltype=CL:0002087!1.07e-17!119;CL:0000037!1.50e-16!172;CL:0000566!1.50e-16!172;CL:0000738!6.68e-16!140;CL:0002032!8.39e-16!165;CL:0000837!8.39e-16!165;CL:0000988!2.96e-15!182;CL:0002031!6.09e-15!124;CL:0000542!4.20e-13!53;CL:0000051!4.20e-13!53;CL:0000838!1.03e-12!52;CL:0000945!2.12e-11!24;CL:0000826!2.12e-11!24;CL:0000236!1.30e-08!14 | |ontology_enrichment_celltype=CL:0002087!1.07e-17!119;CL:0000037!1.50e-16!172;CL:0000566!1.50e-16!172;CL:0000738!6.68e-16!140;CL:0002032!8.39e-16!165;CL:0000837!8.39e-16!165;CL:0000988!2.96e-15!182;CL:0002031!6.09e-15!124;CL:0000542!4.20e-13!53;CL:0000051!4.20e-13!53;CL:0000838!1.03e-12!52;CL:0000945!2.12e-11!24;CL:0000826!2.12e-11!24;CL:0000236!1.30e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.33e-19;13!CL:0000542;2.44e-14;53!CL:0000945;9.57e-14;24!CL:0000624;1.04e-07;6!CL:0002087;1.06e-07;104!CL:0000623;5.02e-07;3!CL:0000791;6.64e-07;18!CL:0000789;6.64e-07;18!CL:0002419;6.64e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.31e-25,115;CL:0000738,7.23e-24,136;CL:0000037,3.74e-21,168;CL:0002031,3.58e-20,120;CL:0000542,8.62e-20,53;CL:0000051,8.62e-20,53;CL:0002032,1.71e-19,161;CL:0000837,1.71e-19,161;CL:0000988,3.32e-19,177;CL:0000838,6.51e-19,52;CL:0000236,5.21e-17,14;CL:0000945,1.01e-13,24;CL:0000826,1.01e-13,24;CL:0000624,1.12e-07,6;CL:0000623,5.11e-07,3;CL:0000825,5.11e-07,3;CL:0000791,5.45e-07,18;CL:0000789,5.45e-07,18;CL:0002420,5.45e-07,18;CL:0002419,5.45e-07,18;CL:0000790,5.45e-07,18;CL:0000766,9.20e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000051;2.44e-14;53!CL:0000790;6.64e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-08!115 | |ontology_enrichment_uberon=UBERON:0007023!1.14e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.57e-07,98;UBERON:0003061,4.57e-07,98 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0.534893840235659,0.656804715599566,0.787107813136792,0.786728553697808,1.53531759238885,2.01260960310899,0,0,0,3.09868802321207,1.42169232487422,0,4.43196326825502,2.60707781711184,2.82114131930607,0.671746422719773,1.29557466407592,2.57575567634187,1.16318591023652,2.64513160582167,0.485168122375632,1.39457422143411,0.411167888021826,0.929119112685311,0,1.0246428261164,0.236482229888585,0,0.645484683583826,0,1.31769637679823,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0.659702600373432,0.797854630486527,0.852449501065388,0,0,0,1.7587406567972,2.60741459210101,0.868755378820466,0,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,1.25795187305026,0.561643155732475,0.300353785683013,0.48217676009124,3.13514018115373,1.19350006319454,0,5.27988733383968,1.09227722252426,6.22656477704488,4.26730222566507,1.20118796110804,5.74752439954483,3.96626923670917,3.81621501814146,7.39976859842283,9.39579502993502,8.41001101875504,0,1.12101712596307,0.263384084775077,2.16380747125216,8.25322601773246,2.2616164889946,0.501559486172034,1.30368906653436,0.946895611469467,0,0.222820913770347,0.589211814949674,0.664601683750863,1.08321545506006,0.512365278902701,0.520237390239513,1.31550323682941,0.829050053357545,0.869409257205157,0.889719378972363,0,1.04535523804977,0.566546713487831,4.98186641682498,2.06176467289578,0.506039384039006,0.318565414324097,0.651083453856419,1.90090408889675,0,0.511946444617674,0,0.473554504088034,0,9.07230344511296,18.7208137048455,13.0341963494519,0,0,0,0.361439152384566,0,0.579386075843295,0,0.973269740605272,0.378139268656271,0.221729397462564,0.175669571386252,0.72038491523742,0,0,0.649094787309367,0.348259474598534,0.26591592103773,1.19245312152671,0.571994910780128,0,0.198762407366705,0,0.694281003215189,0,0,0,0.208994966536811,0.258416759169329,0.71153252537342,0.66944122552934,0.402829317109147,0,0.24406205754817,0,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0.709336764396714,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0,0.117434498643765,0.485618833104395,0.140450806702248,0.408308342509787,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0.500474079487857,0,0,0.30648779579902,0,0,0.89694817844431,0.427114777637135,0,0.300091096084402,0.515262646192195,0.257640540045629,0,0.675105328965065,0.194874010322397,0.504867548488229,0.0920498986422993,0,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0,0.365921118388786,0.132529768321485,0.232387885739037,0.10366105501537,0,0.72995471815166,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.110293972732394,0,0,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,2.53510069643662,0,1.18157981336281,0.441463099414651,0.368965315629341,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.579652024875384,0,0.433099343283221,0.462985512576611,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.176096868026452,1.4512968087854,0.576479813667846,0.50496973370552,0.253991577168676,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0,1.2162378064119,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0,0,0.336255431980582,6.69904584686553,8.40947541952118,9.24069861214188,0,0,0,0.502548796003046,1.91381625495949,0,8.97484377612075,0,0.12269149171914,0,0,0.415941723061614,0.713715955188647,0.157702415033935,0.117141414992713,0,0,0,0,0,0.347534457872331,0.195801157462741,0,2.27444828735176,4.52999821719095,5.87001567918944,0,0,0,0,0,0,0.256278298511402,0,0,0,0.308419387605311,0,0,0,0,0.483437798366489,0.40101294060657,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0.261435451024901,0.769350375349168,0,0,0.412164046590889,0.366277859273374,0.577566499444116,0,0,0,0.290012154876366,0.308097234229289,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0.165284915360978,0.192190067365106,0.510450849978337,0.10115778085555,0,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,1.08890984861323,0.564862804660675,0,0,0,0,0,0.764637207142375,0.569647187174163,1.66762242820452,2.05681136543097,0,1.62009431171434,1.58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| ||
|short_description=p@chr16:23502624..23502628,- | |short_description=p@chr16:23502624..23502628,- | ||
}} | }} |
Latest revision as of 07:14, 25 July 2015
Short description: | p@chr16:23502624..23502628, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:23502624..23502628, - |
Coexpression cluster: | C1634_CD8_CD4_Natural_Neutrophils_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.31e-25 | 115 |
leukocyte | 7.23e-24 | 136 |
hematopoietic stem cell | 3.74e-21 | 168 |
hematopoietic lineage restricted progenitor cell | 3.58e-20 | 120 |
lymphocyte | 8.62e-20 | 53 |
common lymphoid progenitor | 8.62e-20 | 53 |
hematopoietic oligopotent progenitor cell | 1.71e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-19 | 161 |
hematopoietic cell | 3.32e-19 | 177 |
lymphoid lineage restricted progenitor cell | 6.51e-19 | 52 |
B cell | 5.21e-17 | 14 |
lymphocyte of B lineage | 1.01e-13 | 24 |
pro-B cell | 1.01e-13 | 24 |
CD4-positive, alpha-beta T cell | 1.12e-07 | 6 |
natural killer cell | 5.11e-07 | 3 |
pro-NK cell | 5.11e-07 | 3 |
mature alpha-beta T cell | 5.45e-07 | 18 |
alpha-beta T cell | 5.45e-07 | 18 |
immature T cell | 5.45e-07 | 18 |
mature T cell | 5.45e-07 | 18 |
immature alpha-beta T cell | 5.45e-07 | 18 |
myeloid leukocyte | 9.20e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.57e-07 | 98 |
blood island | 4.57e-07 | 98 |