FFCP PHASE1:Hg19::chr1:16163919..16163931,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:16163919..16163931,+
|short_description=p@chr1:16163919..16163931,+
|description=CAGE_peak_at_chr1:16163919..16163931,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:16163919..16163931,+ | |||
|coexpression_cluster_id=C1466 | |||
|description=CAGE_peak_at_chr1:16163919..16163931,+ | |||
|id=chr1:16163919..16163931,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.31e-80!140;CL:0000037!1.54e-74!172;CL:0000566!1.54e-74!172;CL:0000988!1.87e-74!182;CL:0000766!1.40e-73!76;CL:0000557!8.63e-73!71;CL:0002032!8.51e-68!165;CL:0000837!8.51e-68!165;CL:0000763!4.96e-66!112;CL:0000049!4.96e-66!112;CL:0000839!1.33e-65!70;CL:0002031!1.50e-64!124;CL:0002009!2.03e-64!65;CL:0002057!1.80e-61!42;CL:0002194!4.53e-61!63;CL:0000576!4.53e-61!63;CL:0000040!4.53e-61!63;CL:0000559!4.53e-61!63;CL:0002087!1.42e-59!119;CL:0000860!2.47e-56!45;CL:0000134!2.14e-23!358;CL:0002320!2.21e-22!365;CL:0000219!7.97e-19!390;CL:0000034!3.48e-16!444;CL:0000048!1.06e-15!430;CL:0000723!4.35e-15!436;CL:0000451!7.38e-15!10;CL:0002393!4.66e-14!9;CL:0002397!4.66e-14!9;CL:0000990!1.42e-12!8;CL:0000080!1.32e-09!6;CL:0000840!1.54e-09!5;CL:0001029!1.54e-09!5;CL:0002274!3.15e-08!5;CL:0000457!3.15e-08!5;CL:0002191!3.15e-08!5;CL:0000097!3.15e-08!5;CL:0000831!3.15e-08!5;CL:0002028!3.15e-08!5;CL:0000453!6.22e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.86e-62;33!CL:0002057;6.86e-62;33!CL:0000473;9.10e-55;39!CL:0000234;9.10e-55;39!CL:0000576;5.25e-43;48!CL:0000766;9.64e-40;69!CL:0002087;5.75e-19;104!CL:0000763;2.56e-16;100!CL:0000738;4.42e-16;136!CL:0002393;6.01e-16;6!CL:0002397;6.01e-16;6!CL:0000988;1.05e-12;177!CL:0000097;7.50e-09;5!CL:0000623;1.16e-08;3!CL:0000840;2.15e-07;5!CL:0001014;4.37e-07;2!CL:0001016;4.37e-07;2!CL:0000235;7.15e-07;6!CL:0000219;7.17e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,6.83e-90,67;CL:0000473,1.10e-87,48;CL:0000234,1.10e-87,48;CL:0000860,7.51e-83,42;CL:0002057,7.51e-83,42;CL:0000766,8.51e-83,72;CL:0002009,6.76e-80,61;CL:0000839,9.23e-80,66;CL:0000738,2.13e-79,136;CL:0002031,9.15e-75,120;CL:0002194,1.02e-74,59;CL:0000576,1.02e-74,59;CL:0000040,1.02e-74,59;CL:0000559,1.02e-74,59;CL:0000988,9.59e-70,177;CL:0000037,2.25e-67,168;CL:0002087,5.32e-67,115;CL:0002032,3.77e-62,161;CL:0000837,3.77e-62,161;CL:0000763,1.34e-60,108;CL:0000049,1.34e-60,108;CL:0000134,3.26e-24,354;CL:0002320,2.04e-23,361;CL:0000219,1.31e-20,386;CL:0000034,1.64e-18,441;CL:0002393,8.71e-18,9;CL:0002397,8.71e-18,9;CL:0000048,3.52e-17,427;CL:0000723,1.05e-16,433;CL:0000097,6.71e-09,5;CL:0002028,6.71e-09,5;CL:0000623,1.12e-08,3;CL:0000825,1.12e-08,3;CL:0000840,1.71e-07,5;CL:0001029,1.71e-07,5;CL:0001014,4.37e-07,2;CL:0001016,4.37e-07,2;CL:0000235,7.10e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.57e-61;42!CL:0000049;4.47e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.64e-67!102;UBERON:0003061!1.64e-67!102;UBERON:0002371!1.08e-64!80;UBERON:0002193!4.58e-61!112;UBERON:0001474!9.88e-59!86;UBERON:0004765!6.11e-47!101;UBERON:0001434!6.11e-47!101;UBERON:0002405!9.05e-43!115;UBERON:0003081!3.04e-22!216;UBERON:0002204!2.24e-21!167;UBERON:0002384!5.31e-21!375;UBERON:0000178!8.87e-07!15;UBERON:0000179!8.87e-07!15;UBERON:0000463!8.87e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.01e-81,76;UBERON:0001474,3.83e-74,82;UBERON:0002390,8.47e-74,98;UBERON:0003061,8.47e-74,98;UBERON:0004765,2.23e-66,90;UBERON:0002193,1.19e-65,108;UBERON:0002405,8.30e-64,93;UBERON:0001434,2.10e-58,100;UBERON:0002204,1.55e-29,167;UBERON:0003081,3.76e-28,203;UBERON:0002384,2.49e-22,371;UBERON:0000926,4.44e-13,315;UBERON:0004120,4.44e-13,315;UBERON:0006603,4.44e-13,315 | |||
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| ||
|short_description=p@chr1:16163919..16163931,+ | |||
}} | }} |
Latest revision as of 23:40, 27 July 2015
Short description: | p@chr1:16163919..16163931, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:16163919..16163931, + |
Coexpression cluster: | C1466_immature_Mast_CD14_Eosinophils_CD8_CD4_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.01e-81 | 76 |
bone element | 3.83e-74 | 82 |
hematopoietic system | 8.47e-74 | 98 |
blood island | 8.47e-74 | 98 |
skeletal element | 2.23e-66 | 90 |
hemolymphoid system | 1.19e-65 | 108 |
immune system | 8.30e-64 | 93 |
skeletal system | 2.10e-58 | 100 |
musculoskeletal system | 1.55e-29 | 167 |
lateral plate mesoderm | 3.76e-28 | 203 |
connective tissue | 2.49e-22 | 371 |
mesoderm | 4.44e-13 | 315 |
mesoderm-derived structure | 4.44e-13 | 315 |
presumptive mesoderm | 4.44e-13 | 315 |