FFCP PHASE1:Hg19::chr1:161475228..161475239,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:161475228..161475239,+
|short_description=p3@FCGR2A
|description=CAGE_peak_3_at_FCGR2A_5end
|association_with_transcript=0bp_to_ENST00000467654_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2212 | |EntrezGene=2212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3616 | |HGNC=3616 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000467654_5end | |||
|cluster_id=chr1:161475228..161475239,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_FCGR2A_5end | |||
|id=chr1:161475228..161475239,+ | |||
|ontology_enrichment_celltype=CL:0000763!4.17e-70!112;CL:0000049!4.17e-70!112;CL:0000037!1.41e-56!172;CL:0000566!1.41e-56!172;CL:0000766!2.64e-54!76;CL:0002032!1.64e-53!165;CL:0000837!1.64e-53!165;CL:0000988!8.44e-51!182;CL:0000839!5.66e-47!70;CL:0000557!1.03e-46!71;CL:0002009!5.35e-45!65;CL:0002194!9.66e-44!63;CL:0000576!9.66e-44!63;CL:0000040!9.66e-44!63;CL:0000559!9.66e-44!63;CL:0000738!2.44e-39!140;CL:0002057!3.91e-38!42;CL:0000860!2.89e-34!45;CL:0002031!1.18e-32!124;CL:0002087!1.05e-29!119;CL:0000094!8.17e-09!8;CL:0000134!1.65e-08!358;CL:0002393!1.74e-08!9;CL:0002397!1.74e-08!9;CL:0002320!9.86e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-37;33!CL:0002057;1.35e-37;33!CL:0000473;1.62e-37;39!CL:0000234;1.62e-37;39!CL:0000576;9.39e-37;48!CL:0000766;4.77e-32;69!CL:0000763;1.15e-27;100!CL:0000094;2.34e-11;8!CL:0000738;1.42e-10;136!CL:0000988;1.84e-10;177!CL:0002087;1.19e-09;104!CL:0000235;1.29e-08;6!CL:0002393;6.11e-08;6!CL:0002397;6.11e-08;6!CL:0000081;1.15e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.58e-89,108;CL:0000049,9.58e-89,108;CL:0000766,2.22e-74,72;CL:0000557,3.83e-64,67;CL:0002009,2.16e-63,61;CL:0002194,1.04e-61,59;CL:0000576,1.04e-61,59;CL:0000040,1.04e-61,59;CL:0000559,1.04e-61,59;CL:0000839,3.75e-61,66;CL:0000473,1.61e-58,48;CL:0000234,1.61e-58,48;CL:0000037,2.32e-58,168;CL:0002032,1.69e-56,161;CL:0000837,1.69e-56,161;CL:0000988,1.13e-53,177;CL:0000860,4.66e-51,42;CL:0002057,4.66e-51,42;CL:0000738,2.30e-40,136;CL:0002031,2.32e-32,120;CL:0002087,1.95e-31,115;CL:0000134,2.12e-11,354;CL:0000094,2.34e-11,8;CL:0002393,6.49e-11,9;CL:0002397,6.49e-11,9;CL:0002320,1.16e-10,361;CL:0000235,1.25e-08,6;CL:0000219,3.75e-08,386;CL:0000081,1.15e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.62e-36;42!CL:0000049;1.81e-24;108 | |||
|ontology_enrichment_disease=DOID:8692!5.57e-18!31;DOID:1240!5.27e-16!39;DOID:2531!4.30e-13!51;DOID:0060083!4.30e-13!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.56e-20;31!DOID:1240;2.37e-13;39!DOID:2531;7.43e-08;51!DOID:0060083;7.43e-08;51!DOID:1036;1.95e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.26e-21,31;DOID:1240,1.86e-16,39;DOID:2531,1.65e-11,51;DOID:0060083,1.65e-11,51;DOID:1036,1.66e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.41e-49!102;UBERON:0003061!8.41e-49!102;UBERON:0002193!7.33e-46!112;UBERON:0002371!1.30e-39!80;UBERON:0007023!1.62e-39!115;UBERON:0001474!6.52e-35!86;UBERON:0002405!5.66e-29!115;UBERON:0004765!1.28e-26!101;UBERON:0001434!1.28e-26!101;UBERON:0003081!1.53e-14!216;UBERON:0001049!3.58e-13!57;UBERON:0005068!3.58e-13!57;UBERON:0006241!3.58e-13!57;UBERON:0007135!3.58e-13!57;UBERON:0003080!2.94e-10!42;UBERON:0002780!6.09e-10!41;UBERON:0001890!6.09e-10!41;UBERON:0006240!6.09e-10!41;UBERON:0002616!7.78e-10!59;UBERON:0002204!4.10e-09!167;UBERON:0000178!1.57e-08!15;UBERON:0000179!1.57e-08!15;UBERON:0000463!1.57e-08!15;UBERON:0003075!4.06e-08!86;UBERON:0007284!4.06e-08!86;UBERON:0000479!6.65e-08!787;UBERON:0002346!1.30e-07!90;UBERON:0001017!2.17e-07!82;UBERON:0002384!2.72e-07!375;UBERON:0002020!2.86e-07!34;UBERON:0003528!2.86e-07!34;UBERON:0000955!3.20e-07!69;UBERON:0006238!3.20e-07!69;UBERON:0001893!4.11e-07!34;UBERON:0005743!5.26e-07!86;UBERON:0002791!7.77e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.55e-11;15!UBERON:0000179;1.55e-11;15!UBERON:0000463;1.55e-11;15!UBERON:0002390;4.27e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.53e-67,98;UBERON:0003061,1.53e-67,98;UBERON:0002193,4.93e-62,108;UBERON:0002371,1.54e-55,76;UBERON:0002405,1.66e-50,93;UBERON:0001474,8.04e-50,82;UBERON:0004765,2.12e-43,90;UBERON:0001434,7.58e-37,100;UBERON:0003081,6.08e-25,203;UBERON:0007023,2.57e-17,114;UBERON:0002204,6.44e-14,167;UBERON:0000178,1.49e-11,15;UBERON:0000179,1.49e-11,15;UBERON:0000463,1.49e-11,15;UBERON:0002384,3.99e-10,371;UBERON:0000926,1.05e-08,315;UBERON:0004120,1.05e-08,315;UBERON:0006603,1.05e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,17.7013924582007,7.29275856384704,11.9208414953379,0,0,0,0.309868802321207,0.142169232487422,1.17440175733939,9.97191735357379,12.6343001906189,12.5866305015194,30.2285890223898,33.6849412659739,40.6969396862015,17.3023904147682,16.6265415223076,17.7086364667106,18.8267519893605,22.2030659531786,18.5823822537062,20.1384674625505,20.2366958157989,19.6280250807526,28.6138915011393,23.8829332926016,18.9597081232078,17.5065375774622,21.286679704512,18.4273257244969,27.5475503133812,32.0929027076094,23.6554736545645,24.7388475140037,23.7361752569742,23.0161365287655,26.4090407152011,28.9366464592481,19.3074897188628,19.8486445552827,25.0311800841697,21.0673179363963,18.1619850790011,27.9891003350549,22.4688295083028,16.6891676186434,20.1974084966791,18.2403021592287,26.1725710571334,26.1307793544221,33.1094708595985,9.4054205434612,13.9241674039363,10.0465284570549,0,1.09227722252426,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0,0,2.24203425192614,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27426165729639,0,0,1.95747654801105,0.511946444617674,1.24930726552346,3.31488152861624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.89919659471683,0,0,0.97364218096405,1.91542711029194,5.05240249971688,0.953962497221368,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,25.038279312852,58.1670396222488,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,43.5804100774693,11.2322047266834,16.7953213386263,0,0,0,0,0,0,8.86793828212698,1.05658120815871,6.21984346622316,2.88239906833923,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9734695474738,31.642196760224,10.5416969741516,0,0,0,0,0,0,0,0.394061520403854,0,0.385029108839245,0,0,0,0.502548796003046,0,65.1636110834049,47.865833472644,129.297640192043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68425709716127,9.49142483601914,6.29692591040322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0,3.81251743096572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,4.23647103495506,0,0,0,0,35.0138850370197,31.3501254928374,23.9251818613148,24.2996410966945,21.8022004735683,34.369085493214,21.6012574895246,26.1731308177109,0,0,0,0,0.721346064882224,0,0.159426272728822,2.79411120005943,1.34053759092657,0.211673582723883,0.973865820823666,1.40398589056729,4.56469358066384,1.25343916618419,12.5317238545034,0,2.89058535186659,2.82519590067467,2.98092366383228,5.839590860848,10.1389452221791,13.1968903656525,10.8451942112741,5.47086667125713,0,22.1557318105882,7.57275899732753,8.99294313594114,8.45922030527097,0,5.56731081233197,0,1.67165076416218,0,0,0.593929361665277,0,2.98244294329889,2.39138007897872,0,0,0,2.19172787076177,0.276283915531148,0,0,0,0,0,0,5.11572370226872,1.38100767891707,9.57932369387759,0,0,2.04089815956073,0,0,0,0.724999575434793,0,0,0,0,0,0,4.42870692906919,1.80894657938112,0,0.331737779793674,0.591095237907095,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,16.6399071778726,6.64846727600626,14.2125266188824,12.5480021963353,12.754440610164,1.89753732724185,16.2115310559986,0,0,0,0,0,0.796118080530053,0,0,0,0,2.49384192028505,0,1.40558667435203,0.182454789215666,0,0,0,0,0.61214552326098,9.22524062575924,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,0.823040347426423,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,4.51787750343577,0,0,0.788662062837943,1.67569440763353,0.229160424011684,1.43574604915363,0.399358000997982,1.71690419254628,0.669514372325618,0.671834724867263,0,0,0,0,0,0,0,0.795229689809303,2.04305109167363,0,0,0,4.04953004792701,2.32140586367385,0.789744236554321,0,1.33969702408637,0.83927341015997,0,0,0,3.57347663186684,3.31045985182716,0,0,0,0,0,55.7408215888012,0,0,0.58620893471233,0,2.32709321450791,2.77688463659649,0,0,7.68869370487402,3.30129040709298,4.97086866416635,8.93098839261511,0,0.121792598380896,0,0.544017803369474,0.2506898940227,0,0,0,0.886068179966986,0.122026264901963,1.251909307065,3.44045517414043,3.88251680378983,2.79433813236226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48865185073115,0,0,0.163565394255844,0,0,0,0,8.21526318644885,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.770750701157514,0,2.07524016774297,0,0,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0,1.0529445968896,0,0.781514011233092,0,0,0,0.607838261565552,0,1.2401207790071,0.6975739121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| ||
|short_description=p3@FCGR2A | |||
}} | }} |
Latest revision as of 06:08, 18 September 2015
Short description: | p3@FCGR2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FCGR2A_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000467654_5end |
EntrezGene: | FCGR2A |
HGNC: | 3616 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.58e-89 | 108 |
common myeloid progenitor | 9.58e-89 | 108 |
myeloid leukocyte | 2.22e-74 | 72 |
granulocyte monocyte progenitor cell | 3.83e-64 | 67 |
macrophage dendritic cell progenitor | 2.16e-63 | 61 |
monopoietic cell | 1.04e-61 | 59 |
monocyte | 1.04e-61 | 59 |
monoblast | 1.04e-61 | 59 |
promonocyte | 1.04e-61 | 59 |
myeloid lineage restricted progenitor cell | 3.75e-61 | 66 |
defensive cell | 1.61e-58 | 48 |
phagocyte | 1.61e-58 | 48 |
hematopoietic stem cell | 2.32e-58 | 168 |
hematopoietic oligopotent progenitor cell | 1.69e-56 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-56 | 161 |
hematopoietic cell | 1.13e-53 | 177 |
classical monocyte | 4.66e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.66e-51 | 42 |
leukocyte | 2.30e-40 | 136 |
hematopoietic lineage restricted progenitor cell | 2.32e-32 | 120 |
nongranular leukocyte | 1.95e-31 | 115 |
mesenchymal cell | 2.12e-11 | 354 |
granulocyte | 2.34e-11 | 8 |
intermediate monocyte | 6.49e-11 | 9 |
CD14-positive, CD16-positive monocyte | 6.49e-11 | 9 |
connective tissue cell | 1.16e-10 | 361 |
macrophage | 1.25e-08 | 6 |
motile cell | 3.75e-08 | 386 |
blood cell | 1.15e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.53e-67 | 98 |
blood island | 1.53e-67 | 98 |
hemolymphoid system | 4.93e-62 | 108 |
bone marrow | 1.54e-55 | 76 |
immune system | 1.66e-50 | 93 |
bone element | 8.04e-50 | 82 |
skeletal element | 2.12e-43 | 90 |
skeletal system | 7.58e-37 | 100 |
lateral plate mesoderm | 6.08e-25 | 203 |
adult organism | 2.57e-17 | 114 |
musculoskeletal system | 6.44e-14 | 167 |
blood | 1.49e-11 | 15 |
haemolymphatic fluid | 1.49e-11 | 15 |
organism substance | 1.49e-11 | 15 |
connective tissue | 3.99e-10 | 371 |
mesoderm | 1.05e-08 | 315 |
mesoderm-derived structure | 1.05e-08 | 315 |
presumptive mesoderm | 1.05e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.26e-21 | 31 |
leukemia | 1.86e-16 | 39 |
hematologic cancer | 1.65e-11 | 51 |
immune system cancer | 1.65e-11 | 51 |
chronic leukemia | 1.66e-07 | 8 |