FFCP PHASE1:Hg19::chr1:16174232..16174245,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23013 | |EntrezGene=23013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17575 | |HGNC=17575 | ||
|TSSclassifier=strong | |||
|UniProt=Q96T58 | |UniProt=Q96T58 | ||
|association_with_transcript=-113bp_to_ENST00000375759,NM_015001,uc001axk.1_5end | |association_with_transcript=-113bp_to_ENST00000375759,NM_015001,uc001axk.1_5end | ||
|cluster_id=chr1:16174232..16174245,+ | |||
|description=CAGE_peak_3_at_SPEN_5end | |description=CAGE_peak_3_at_SPEN_5end | ||
|id=chr1:16174232..16174245,+ | |id=chr1:16174232..16174245,+ | ||
|ontology_enrichment_celltype=CL:0000763!5.76e-22!112;CL:0000049!5.76e-22!112;CL:0000037!8.40e-22!172;CL:0000566!8.40e-22!172;CL:0002032!1.73e-21!165;CL:0000837!1.73e-21!165;CL:0000766!4.08e-21!76;CL:0000738!9.10e-21!140;CL:0000860!5.15e-20!45;CL:0000988!5.35e-20!182;CL:0002057!1.20e-19!42;CL:0000557!2.72e-19!71;CL:0000839!2.54e-17!70;CL:0002009!4.57e-17!65;CL:0002031!5.15e-17!124;CL:0002194!4.35e-16!63;CL:0000576!4.35e-16!63;CL:0000040!4.35e-16!63;CL:0000559!4.35e-16!63;CL:0002087!2.25e-15!119 | |ontology_enrichment_celltype=CL:0000763!5.76e-22!112;CL:0000049!5.76e-22!112;CL:0000037!8.40e-22!172;CL:0000566!8.40e-22!172;CL:0002032!1.73e-21!165;CL:0000837!1.73e-21!165;CL:0000766!4.08e-21!76;CL:0000738!9.10e-21!140;CL:0000860!5.15e-20!45;CL:0000988!5.35e-20!182;CL:0002057!1.20e-19!42;CL:0000557!2.72e-19!71;CL:0000839!2.54e-17!70;CL:0002009!4.57e-17!65;CL:0002031!5.15e-17!124;CL:0002194!4.35e-16!63;CL:0000576!4.35e-16!63;CL:0000040!4.35e-16!63;CL:0000559!4.35e-16!63;CL:0002087!2.25e-15!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.38e-24;33!CL:0002057;3.38e-24;33!CL:0000473;8.18e-17;39!CL:0000234;8.18e-17;39!CL:0000576;2.78e-16;48!CL:0000766;1.60e-11;69!CL:0000763;1.45e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.63e-26,42;CL:0002057,1.63e-26,42;CL:0000766,3.78e-26,72;CL:0000557,5.44e-24,67;CL:0000763,8.68e-24,108;CL:0000049,8.68e-24,108;CL:0000473,1.64e-22,48;CL:0000234,1.64e-22,48;CL:0000839,1.07e-21,66;CL:0002009,1.38e-20,61;CL:0002194,4.06e-19,59;CL:0000576,4.06e-19,59;CL:0000040,4.06e-19,59;CL:0000559,4.06e-19,59;CL:0000738,8.41e-19,136;CL:0000037,1.86e-18,168;CL:0002032,3.54e-18,161;CL:0000837,3.54e-18,161;CL:0000988,6.15e-17,177;CL:0002031,1.52e-15,120;CL:0002087,8.84e-13,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-19;42!CL:0000049;1.22e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-14!102;UBERON:0003061!1.27e-14!102;UBERON:0002371!4.28e-14!80;UBERON:0001474!1.11e-13!86;UBERON:0002193!1.94e-12!112;UBERON:0004765!1.08e-09!101;UBERON:0001434!1.08e-09!101;UBERON:0002405!7.74e-09!115;UBERON:0007023!2.84e-08!115 | |ontology_enrichment_uberon=UBERON:0002390!1.27e-14!102;UBERON:0003061!1.27e-14!102;UBERON:0002371!4.28e-14!80;UBERON:0001474!1.11e-13!86;UBERON:0002193!1.94e-12!112;UBERON:0004765!1.08e-09!101;UBERON:0001434!1.08e-09!101;UBERON:0002405!7.74e-09!115;UBERON:0007023!2.84e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.16e-19,82;UBERON:0002371,4.97e-19,76;UBERON:0002390,2.97e-17,98;UBERON:0003061,2.97e-17,98;UBERON:0004765,6.38e-16,90;UBERON:0002405,2.96e-15,93;UBERON:0002193,1.65e-14,108;UBERON:0001434,3.16e-13,100 | |||
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| ||
|short_description=p3@SPEN | |short_description=p3@SPEN | ||
}} | }} |
Latest revision as of 06:46, 18 September 2015
Short description: | p3@SPEN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPEN_5end |
Coexpression cluster: | NA |
Association with transcript: | -113bp_to_ENST00000375759, NM_015001, uc001axk.1_5end |
EntrezGene: | SPEN |
HGNC: | 17575 |
UniProt: | Q96T58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.63e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.63e-26 | 42 |
myeloid leukocyte | 3.78e-26 | 72 |
granulocyte monocyte progenitor cell | 5.44e-24 | 67 |
myeloid cell | 8.68e-24 | 108 |
common myeloid progenitor | 8.68e-24 | 108 |
defensive cell | 1.64e-22 | 48 |
phagocyte | 1.64e-22 | 48 |
myeloid lineage restricted progenitor cell | 1.07e-21 | 66 |
macrophage dendritic cell progenitor | 1.38e-20 | 61 |
monopoietic cell | 4.06e-19 | 59 |
monocyte | 4.06e-19 | 59 |
monoblast | 4.06e-19 | 59 |
promonocyte | 4.06e-19 | 59 |
leukocyte | 8.41e-19 | 136 |
hematopoietic stem cell | 1.86e-18 | 168 |
hematopoietic oligopotent progenitor cell | 3.54e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.54e-18 | 161 |
hematopoietic cell | 6.15e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 1.52e-15 | 120 |
nongranular leukocyte | 8.84e-13 | 115 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.16e-19 | 82 |
bone marrow | 4.97e-19 | 76 |
hematopoietic system | 2.97e-17 | 98 |
blood island | 2.97e-17 | 98 |
skeletal element | 6.38e-16 | 90 |
immune system | 2.96e-15 | 93 |
hemolymphoid system | 1.65e-14 | 108 |
skeletal system | 3.16e-13 | 100 |