FFCP PHASE1:Hg19::chr12:122908159..122908168,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:122908159..122908168,- | |||
|description=CAGE_peak_at_chr12:122908159..122908168,- | |description=CAGE_peak_at_chr12:122908159..122908168,- | ||
|id=chr12:122908159..122908168,- | |id=chr12:122908159..122908168,- | ||
|ontology_enrichment_celltype=CL:0000066!2.52e-14!254;CL:0000039!1.33e-09!7;CL:0000586!1.33e-09!7;CL:0002322!8.48e-09!5;CL:0000083!2.39e-07!4;CL:0000147!4.05e-07!14 | |ontology_enrichment_celltype=CL:0000066!2.52e-14!254;CL:0000039!1.33e-09!7;CL:0000586!1.33e-09!7;CL:0002322!8.48e-09!5;CL:0000083!2.39e-07!4;CL:0000147!4.05e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.51e-20;7!CL:0000586;1.51e-20;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.20e-20,7;CL:0000586,1.20e-20,7 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.53e-16;1 | |||
|ontology_enrichment_disease=DOID:305!2.61e-19!106;DOID:0050687!1.20e-14!143;DOID:14566!9.90e-09!239;DOID:162!1.04e-08!235;DOID:1793!2.39e-07!4;DOID:299!3.52e-07!25 | |ontology_enrichment_disease=DOID:305!2.61e-19!106;DOID:0050687!1.20e-14!143;DOID:14566!9.90e-09!239;DOID:162!1.04e-08!235;DOID:1793!2.39e-07!4;DOID:299!3.52e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.53e-16;1!DOID:10165;1.53e-16;1!DOID:1798;1.53e-16;1!DOID:3095;6.16e-07;22!DOID:2994;6.16e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,7.57e-17,1;DOID:10165,7.57e-17,1;DOID:1798,7.57e-17,1;DOID:3095,5.74e-07,22;DOID:2994,5.74e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.27e-09!12 | |ontology_enrichment_uberon=UBERON:0000344!1.27e-09!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.53e-16;1!UBERON:0001785;1.53e-16;1!UBERON:0002464;1.53e-16;1!UBERON:0004904;1.53e-16;1!UBERON:0001021;1.53e-16;1!UBERON:0003714;6.17e-09;2!UBERON:0005162;6.17e-09;2!UBERON:0000122;6.17e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.65e-16,1;UBERON:0001785,1.65e-16,1;UBERON:0002464,1.65e-16,1;UBERON:0004904,1.65e-16,1;UBERON:0001021,1.65e-16,1;UBERON:0003902,1.65e-16,1;UBERON:0005425,1.65e-16,1;UBERON:0003714,6.42e-09,2;UBERON:0005162,6.42e-09,2;UBERON:0000122,6.42e-09,2 | |||
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| ||
|short_description=p@chr12:122908159..122908168,- | |short_description=p@chr12:122908159..122908168,- | ||
}} | }} |
Latest revision as of 06:06, 24 July 2015
Short description: | p@chr12:122908159..122908168, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122908159..122908168, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.20e-20 | 7 |
germ cell | 1.20e-20 | 7 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.65e-16 | 1 |
cranial nerve | 1.65e-16 | 1 |
nerve trunk | 1.65e-16 | 1 |
nerve connecting eye with brain | 1.65e-16 | 1 |
nerve | 1.65e-16 | 1 |
retinal neural layer | 1.65e-16 | 1 |
presumptive neural retina | 1.65e-16 | 1 |
neural tissue | 6.42e-09 | 2 |
multi cell component structure | 6.42e-09 | 2 |
neuron projection bundle | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 7.57e-17 | 1 |
endocrine pancreas cancer | 7.57e-17 | 1 |
pancreatic endocrine carcinoma | 7.57e-17 | 1 |
germ cell and embryonal cancer | 5.74e-07 | 22 |
germ cell cancer | 5.74e-07 | 22 |