FFCP PHASE1:Hg19::chr1:152881014..152881031,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3713 | |EntrezGene=3713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6187 | |HGNC=6187 | ||
|TSSclassifier=strong | |||
|UniProt=P07476 | |UniProt=P07476 | ||
|association_with_transcript=0bp_to_ENST00000368764,ENST00000392667_5end | |association_with_transcript=0bp_to_ENST00000368764,ENST00000392667_5end | ||
|cluster_id=chr1:152881014..152881031,+ | |||
|coexpression_cluster_id=C1597 | |coexpression_cluster_id=C1597 | ||
|description=CAGE_peak_1_at_IVL_5end | |description=CAGE_peak_1_at_IVL_5end | ||
|id=chr1:152881014..152881031,+ | |id=chr1:152881014..152881031,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.86e-12!43;CL:0000066!4.02e-12!254;CL:0002368!1.96e-10!13;CL:0002159!2.91e-08!13;CL:0000223!5.43e-08!59;CL:0000076!5.96e-08!62;CL:0000622!4.29e-07!5;CL:0002202!5.41e-07!9;CL:0002632!5.41e-07!9 | |ontology_enrichment_celltype=CL:0002076!1.86e-12!43;CL:0000066!4.02e-12!254;CL:0002368!1.96e-10!13;CL:0002159!2.91e-08!13;CL:0000223!5.43e-08!59;CL:0000076!5.96e-08!62;CL:0000622!4.29e-07!5;CL:0002202!5.41e-07!9;CL:0002632!5.41e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002368;4.08e-12;13!CL:0002076;7.59e-12;42!CL:0002159;2.05e-10;14!CL:0000622;3.18e-09;5!CL:0000244;9.27e-08;4!CL:0000731;9.27e-08;4!CL:0000154;1.48e-07;6!CL:0002202;1.69e-07;9!CL:0002632;1.69e-07;9!CL:0002251;4.12e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.61e-15,253;CL:0002076,1.17e-14,42;CL:0002368,4.69e-12,13;CL:0002159,2.18e-10,14;CL:0000622,3.13e-09,5;CL:0000223,1.02e-08,58;CL:0000076,2.63e-08,63;CL:0000244,9.29e-08,4;CL:0000731,9.29e-08,4;CL:0000154,1.46e-07,6;CL:0002202,1.97e-07,9;CL:0002632,1.97e-07,9;CL:0002251,4.11e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060072;7.02e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,6.77e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001004!7.60e-10!72;UBERON:0004175!9.78e-09!25;UBERON:0003100!3.88e-08!41;UBERON:0005795!4.67e-08!22;UBERON:0000161!6.52e-08!35;UBERON:0003975!6.69e-08!22;UBERON:0005631!6.92e-08!14;UBERON:0000158!6.92e-08!14;UBERON:0003102!8.47e-08!95;UBERON:0004119!1.66e-07!169;UBERON:0000925!1.66e-07!169;UBERON:0006595!1.66e-07!169;UBERON:0000995!3.24e-07!21;UBERON:0000065!3.76e-07!53;UBERON:0000464!5.91e-07!104;UBERON:0005156!6.78e-07!59;UBERON:0000990!6.78e-07!59;UBERON:0005181!9.31e-07!35 | |ontology_enrichment_uberon=UBERON:0001004!7.60e-10!72;UBERON:0004175!9.78e-09!25;UBERON:0003100!3.88e-08!41;UBERON:0005795!4.67e-08!22;UBERON:0000161!6.52e-08!35;UBERON:0003975!6.69e-08!22;UBERON:0005631!6.92e-08!14;UBERON:0000158!6.92e-08!14;UBERON:0003102!8.47e-08!95;UBERON:0004119!1.66e-07!169;UBERON:0000925!1.66e-07!169;UBERON:0006595!1.66e-07!169;UBERON:0000995!3.24e-07!21;UBERON:0000065!3.76e-07!53;UBERON:0000464!5.91e-07!104;UBERON:0005156!6.78e-07!59;UBERON:0000990!6.78e-07!59;UBERON:0005181!9.31e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.14e-08;5!UBERON:0000486;1.40e-07;12!UBERON:0005910;4.19e-07;6!UBERON:0004175;5.04e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,7.90e-11,74;UBERON:0004175,2.41e-10,25;UBERON:0000161,1.43e-09,36;UBERON:0004119,1.60e-09,160;UBERON:0000925,1.60e-09,160;UBERON:0006595,1.60e-09,160;UBERON:0003102,2.42e-09,99;UBERON:0005795,2.89e-09,22;UBERON:0003975,4.58e-09,22;UBERON:0000365,1.06e-08,5;UBERON:0000153,1.37e-08,62;UBERON:0007811,1.37e-08,62;UBERON:0000995,3.64e-08,21;UBERON:0000166,7.85e-08,22;UBERON:0003100,1.90e-07,41;UBERON:0001008,3.61e-07,48;UBERON:0005910,3.94e-07,6;UBERON:0000065,7.39e-07,54 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0.982935746006035,4.18680700783456,9.39297900159741,13.979649846108,0,0,3.36162573225888,6.62963980826375,5.11217063271161,6.34312638427659,0,0,0,0,0,0,3.36218985290986,5.99334302984604,3.14843125254717,0,0,0,37.696270203636,34.3374747407205,9.98335827450327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8971910474006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.175669571386252,1.57174890597255,67.3946283341203,238.414396710388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.7300580113666,0,0,0,0,2.83734705758686,0,0,2.22000793575444,0,0,0,0,0,0,0.624320153660641,1.1409436430889,1.04614076386261,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0.37223371266318,1.5189869901714,0,0.504867548488229,0,0,0,0,0,36.1397795415365,87.2787585890671,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,293.801514038891,113.525770790196,48.5554936748177,7.68484094815796,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49870671894216,2.01578553838631,28.6385696429621,2.7763142037883,23.8319829581449,16.8688378832693,0,0,0,0,0,2.09543051164158,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,55.7662847560234,23.5314033822079,175.152680550964,0,0,0,0,0,0,1.15825045334063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,13.0344855721892,4.99306318531491,1.81434175997808,0,0,0,0,0,0,0,0,0.177561725313127,0.410635780069046,0,0.232420756919918,0,54.7382663927968,132.136219123011,0,0,0,2.70719767744447,1.84836809050595,0,1.46139224653261,0.527758144464379,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,2.05160100093111,3.60816110269676,20.4988388638511,0,0,0,159.645819562936,294.477291454544,0,0,0,0,0,0,0,0.170453254832202,0,33.7181227336395,11.1470239071762,5.35973392477253,7.89030690673289,0.464845549297286,1.5740617341532,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,1.01091240786658,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.92947049429925,0,0,0,0.35667105148125,3.90237170477658,0,0,0,0,17.3199802905922,10.7248364085726,7.62236894029258,0.282431402330337,120.541504347944,224.067062637942,329.912034231287,50.0797012451172,0,0,0,0,0,0,0,0,0,0,21.5635390063308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58116727106535,0.296964680832639,9.82914246717543,0,0,0,0,0,0.597743964753209,0,0,0,4.06179858021529,0,0,0,0,19.4327509104759,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,1.01701460117107,1.89110145414349,0,0,0,0,0,0,0,0,0,0,385.227805441781,165.98170759269,0,0,0,0,0.957003479195758,0.274792780205587,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0.978323094660449,0.242780379534093,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,32.6314683389878,14.3647690857664,47.8751070983163,0,0,0,0,377.578241189417,0,2.48578814858586,3.70013196546227,1.58971689362392,0,19.3595868907455,1.28254112402454,0.213452994739353,0,0,0,0,0,0,52.0883816503118,0.543616824294456,0.836822770498666,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0.604651252380536,0,0,0,0,0,0,1.01607998478941,0,0,0,0,0,32.8461881665191,23.2140586367385,0,161.008650047648,0.472834243795189,0.419636705079985,0.211200673038813,0,0.959575986597226,0,0,0,54.2999601753713,41.4826315776609,634.559240692582,0,0,0,0.226624183040251,0,0,0,0,0,0.704815022316672,0.106787412567695,1.10043013569766,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796483835818512,0.449803112163605,0,0,0.265841714557995,0,0.901545653983311,3.80805212168795,1.62748293281865,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,1.62065732026684,0,1.4327107286519,1.23520578864389,0.877136198314828,3.7104720648635,26.6221372813862,1.68942440653073,0,0.690860683462397,0,0,0.389720617678777,0.398594520940089,0.327130788511688,0,0,0,0,0,0,0,0,53.7137309642667,7.46492712039567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27592034051333,0,2.01771458373847,0.231051332300676,0.381382095467167,0.690359926060101,0,0,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0,0,0,10.9166459245645,0,8.56008265185288,0,0,0,0,1.41923792260222,0.576169937778896,0,0,0.0657727735628491,0.945550727071746,0,7.69232309935037,0,0.280272163313789,0,1.94334832096759,0,0,0,0,0,0,34.3978832510641,83.8227722531294,288.255278976476,2.15113679410139,4.25995202630035,6.90228578549177,0,0.22910686854405,0,0,0,0,0,0,0,0,147.656141889978,0,0,0,0,0,0,0,0.218559560503957,0,3.92237314806249,0,0,0,0,0,0,0,0,5.71372603538104,73.7550281885796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0.803892390468535,0,0,116.425754117936,1.42838658878244,6.3297131639286,7.01444271543194,0,0.0636471582781649,0,584.351751355444,245.723510179232,186.228426585335,39.8058239929354,4.65724499164419,2.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|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0.982935746006035,4.18680700783456,9.39297900159741,13.979649846108,0,0,3.36162573225888,6.62963980826375,5.11217063271161,6.34312638427659,0,0,0,0,0,0,3.36218985290986,5.99334302984604,3.14843125254717,0,0,0,37.696270203636,34.3374747407205,9.98335827450327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8971910474006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.175669571386252,1.57174890597255,67.3946283341203,238.414396710388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.7300580113666,0,0,0,0,2.83734705758686,0,0,2.22000793575444,0,0,0,0,0,0,0.624320153660641,1.1409436430889,1.04614076386261,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0.37223371266318,1.5189869901714,0,0.504867548488229,0,0,0,0,0,36.1397795415365,87.2787585890671,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,293.801514038891,113.525770790196,48.5554936748177,7.68484094815796,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49870671894216,2.01578553838631,28.6385696429621,2.7763142037883,23.8319829581449,16.8688378832693,0,0,0,0,0,2.09543051164158,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,55.7662847560234,23.5314033822079,175.152680550964,0,0,0,0,0,0,1.15825045334063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,13.0344855721892,4.99306318531491,1.81434175997808,0,0,0,0,0,0,0,0,0.177561725313127,0.410635780069046,0,0.232420756919918,0,54.7382663927968,132.136219123011,0,0,0,2.70719767744447,1.84836809050595,0,1.46139224653261,0.527758144464379,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,2.05160100093111,3.60816110269676,20.4988388638511,0,0,0,159.645819562936,294.477291454544,0,0,0,0,0,0,0,0.170453254832202,0,33.7181227336395,11.1470239071762,5.35973392477253,7.89030690673289,0.464845549297286,1.5740617341532,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,1.01091240786658,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.92947049429925,0,0,0,0.35667105148125,3.90237170477658,0,0,0,0,17.3199802905922,10.7248364085726,7.62236894029258,0.282431402330337,120.541504347944,224.067062637942,329.912034231287,50.0797012451172,0,0,0,0,0,0,0,0,0,0,21.5635390063308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58116727106535,0.296964680832639,9.82914246717543,0,0,0,0,0,0.597743964753209,0,0,0,4.06179858021529,0,0,0,0,19.4327509104759,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,1.01701460117107,1.89110145414349,0,0,0,0,0,0,0,0,0,0,385.227805441781,165.98170759269,0,0,0,0,0.957003479195758,0.274792780205587,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0.978323094660449,0.242780379534093,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,32.6314683389878,14.3647690857664,47.8751070983163,0,0,0,0,377.578241189417,0,2.48578814858586,3.70013196546227,1.58971689362392,0,19.3595868907455,1.28254112402454,0.213452994739353,0,0,0,0,0,0,52.0883816503118,0.543616824294456,0.836822770498666,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0.604651252380536,0,0,0,0,0,0,1.01607998478941,0,0,0,0,0,32.8461881665191,23.2140586367385,0,161.008650047648,0.472834243795189,0.419636705079985,0.211200673038813,0,0.959575986597226,0,0,0,54.2999601753713,41.4826315776609,634.559240692582,0,0,0,0.226624183040251,0,0,0,0,0,0.704815022316672,0.106787412567695,1.10043013569766,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796483835818512,0.449803112163605,0,0,0.265841714557995,0,0.901545653983311,3.80805212168795,1.62748293281865,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,1.62065732026684,0,1.4327107286519,1.23520578864389,0.877136198314828,3.7104720648635,26.6221372813862,1.68942440653073,0,0.690860683462397,0,0,0.389720617678777,0.398594520940089,0.327130788511688,0,0,0,0,0,0,0,0,53.7137309642667,7.46492712039567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27592034051333,0,2.01771458373847,0.231051332300676,0.381382095467167,0.690359926060101,0,0,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0,0,0,10.9166459245645,0,8.56008265185288,0,0,0,0,1.41923792260222,0.576169937778896,0,0,0.0657727735628491,0.945550727071746,0,7.69232309935037,0,0.280272163313789,0,1.94334832096759,0,0,0,0,0,0,34.3978832510641,83.8227722531294,288.255278976476,2.15113679410139,4.25995202630035,6.90228578549177,0,0.22910686854405,0,0,0,0,0,0,0,0,147.656141889978,0,0,0,0,0,0,0,0.218559560503957,0,3.92237314806249,0,0,0,0,0,0,0,0,5.71372603538104,73.7550281885796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0.803892390468535,0,0,116.425754117936,1.42838658878244,6.3297131639286,7.01444271543194,0,0.0636471582781649,0,584.351751355444,245.723510179232,186.228426585335,39.8058239929354,4.65724499164419,2.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| ||
|short_description=p1@IVL | |short_description=p1@IVL | ||
}} | }} |
Latest revision as of 03:59, 17 September 2015
Short description: | p1@IVL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IVL_5end |
Coexpression cluster: | C1597_tongue_esophagus_tonsil_salivary_Urothelial_uterus_Sebocyte |
Association with transcript: | 0bp_to_ENST00000368764, ENST00000392667_5end |
EntrezGene: | IVL |
HGNC: | 6187 |
UniProt: | P07476 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.61e-15 | 253 |
endo-epithelial cell | 1.17e-14 | 42 |
respiratory epithelial cell | 4.69e-12 | 13 |
general ecto-epithelial cell | 2.18e-10 | 14 |
acinar cell | 3.13e-09 | 5 |
endodermal cell | 1.02e-08 | 58 |
squamous epithelial cell | 2.63e-08 | 63 |
transitional epithelial cell | 9.29e-08 | 4 |
urothelial cell | 9.29e-08 | 4 |
protein secreting cell | 1.46e-07 | 6 |
epithelial cell of tracheobronchial tree | 1.97e-07 | 9 |
epithelial cell of lower respiratory tract | 1.97e-07 | 9 |
epithelial cell of alimentary canal | 4.11e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 7.90e-11 | 74 |
internal genitalia | 2.41e-10 | 25 |
orifice | 1.43e-09 | 36 |
endoderm-derived structure | 1.60e-09 | 160 |
endoderm | 1.60e-09 | 160 |
presumptive endoderm | 1.60e-09 | 160 |
surface structure | 2.42e-09 | 99 |
embryonic uterus | 2.89e-09 | 22 |
internal female genitalia | 4.58e-09 | 22 |
urothelium | 1.06e-08 | 5 |
anterior region of body | 1.37e-08 | 62 |
craniocervical region | 1.37e-08 | 62 |
uterus | 3.64e-08 | 21 |
oral opening | 7.85e-08 | 22 |
female organism | 1.90e-07 | 41 |
renal system | 3.61e-07 | 48 |
transitional epithelium | 3.94e-07 | 6 |
respiratory tract | 7.39e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 6.77e-07 | 4 |