FFCP PHASE1:Hg19::chr4:146402557..146402563,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4086 | |EntrezGene=4086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6767 | |HGNC=6767 | ||
|TSSclassifier=strong | |||
|UniProt=D6RDN7 | |UniProt=D6RDN7 | ||
|association_with_transcript=-286bp_to_ENST00000514831_5end | |association_with_transcript=-286bp_to_ENST00000514831_5end | ||
|cluster_id=chr4:146402557..146402563,+ | |||
|coexpression_cluster_id=C183 | |coexpression_cluster_id=C183 | ||
|description=CAGE_peak_25_at_SMAD1_5end | |description=CAGE_peak_25_at_SMAD1_5end | ||
|id=chr4:146402557..146402563,+ | |id=chr4:146402557..146402563,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.60e-11!24;CL:0005020!6.85e-09!6;CL:0002138!6.85e-09!6;CL:0005022!6.85e-09!6;CL:0000115!2.94e-07!35 | |ontology_enrichment_celltype=CL:0002139!1.60e-11!24;CL:0005020!6.85e-09!6;CL:0002138!6.85e-09!6;CL:0005022!6.85e-09!6;CL:0000115!2.94e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000817;1.23e-66;1!CL:0002144;3.66e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,2.62e-23,3;CL:0002144,4.09e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4556;3.66e-23;3!DOID:3908;1.71e-14;5!DOID:3905;1.16e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,3.27e-23,3;DOID:3908,1.60e-14,5;DOID:3905,1.12e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0002465!1.86e-11!10;UBERON:0001473!3.62e-10!8;UBERON:0004536!3.62e-10!8;UBERON:0006558!3.62e-10!8 | |ontology_enrichment_uberon=UBERON:0002465!1.86e-11!10;UBERON:0001473!3.62e-10!8;UBERON:0004536!3.62e-10!8;UBERON:0006558!3.62e-10!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;3.66e-23;3!UBERON:0001915;3.66e-23;3!UBERON:0001982;3.66e-23;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,4.09e-23,3;UBERON:0001915,4.09e-23,3;UBERON:0001982,4.09e-23,3 | |||
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| ||
|short_description=p25@SMAD1 | |short_description=p25@SMAD1 | ||
}} | }} |
Latest revision as of 23:06, 15 September 2015
Short description: | p25@SMAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_SMAD1_5end |
Coexpression cluster: | C183_acute_non_CD34_diffuse_CD133_myeloma_Burkitt |
Association with transcript: | -286bp_to_ENST00000514831_5end |
EntrezGene: | SMAD1 |
HGNC: | 6767 |
UniProt: | D6RDN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 2.62e-23 | 3 |
capillary endothelial cell | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 4.09e-23 | 3 |
endothelium of capillary | 4.09e-23 | 3 |
capillary | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 3.27e-23 | 3 |
non-small cell lung carcinoma | 1.60e-14 | 5 |
lung carcinoma | 1.12e-08 | 9 |