FFCP PHASE1:Hg19::chr1:159796480..159796494,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:159796480..159796494,+
|short_description=p5@SLAMF8
|description=CAGE_peak_5_at_SLAMF8_5end
|association_with_transcript=1bp_to_NM_020125,uc001fue.3_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56833 | |EntrezGene=56833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21391 | |HGNC=21391 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P0V8 | |UniProt=Q9P0V8 | ||
|association_with_transcript=1bp_to_NM_020125,uc001fue.3_5end | |||
|cluster_id=chr1:159796480..159796494,+ | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_5_at_SLAMF8_5end | |||
|id=chr1:159796480..159796494,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.25e-22!65;CL:0002087!1.36e-21!119;CL:0002031!2.47e-21!124;CL:0002194!1.22e-20!63;CL:0000576!1.22e-20!63;CL:0000040!1.22e-20!63;CL:0000559!1.22e-20!63;CL:0000557!1.13e-19!71;CL:0000738!1.67e-19!140;CL:0002032!1.03e-18!165;CL:0000837!1.03e-18!165;CL:0000037!6.54e-18!172;CL:0000566!6.54e-18!172;CL:0000839!2.00e-17!70;CL:0000766!2.68e-17!76;CL:0000988!7.12e-16!182;CL:0000763!3.31e-15!112;CL:0000049!3.31e-15!112;CL:0000625!7.38e-15!11;CL:0002057!5.74e-13!42;CL:0000860!1.27e-11!45;CL:0000791!3.11e-11!18;CL:0000789!3.11e-11!18;CL:0002420!3.11e-11!18;CL:0002419!3.11e-11!18;CL:0000790!3.11e-11!18;CL:0000084!1.02e-09!25;CL:0000827!1.02e-09!25;CL:0000840!3.96e-07!5;CL:0001029!3.96e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.40e-28;6!CL:0000473;9.47e-20;39!CL:0000234;9.47e-20;39!CL:0002619;8.46e-15;3!CL:0000840;6.99e-13;5!CL:0000860;1.94e-10;33!CL:0002057;1.94e-10;33!CL:0000576;5.92e-10;48!CL:0000625;9.99e-10;11!CL:0000990;1.35e-08;8!CL:0000766;1.19e-07;69!CL:0000451;4.97e-07;10!CL:0000763;9.51e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.26e-33,61;CL:0002194,9.24e-32,59;CL:0000576,9.24e-32,59;CL:0000040,9.24e-32,59;CL:0000559,9.24e-32,59;CL:0000557,3.69e-30,67;CL:0000235,4.41e-28,6;CL:0000839,7.07e-28,66;CL:0002031,8.49e-27,120;CL:0002087,3.93e-26,115;CL:0000766,3.83e-25,72;CL:0000738,7.56e-23,136;CL:0002032,2.88e-21,161;CL:0000837,2.88e-21,161;CL:0000473,1.86e-20,48;CL:0000234,1.86e-20,48;CL:0000763,3.83e-20,108;CL:0000049,3.83e-20,108;CL:0000037,4.40e-20,168;CL:0000988,1.07e-18,177;CL:0002619,8.47e-15,3;CL:0000840,7.43e-13,5;CL:0001029,7.43e-13,5;CL:0000625,8.92e-10,11;CL:0000860,1.21e-08,42;CL:0002057,1.21e-08,42;CL:0000990,1.41e-08,8;CL:0000451,5.13e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000049;2.58e-07;108!CL:0002057;3.01e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.02e-24!102;UBERON:0003061!4.02e-24!102;UBERON:0007023!6.75e-24!115;UBERON:0002193!1.08e-22!112;UBERON:0002371!4.14e-16!80;UBERON:0001474!3.58e-14!86;UBERON:0002405!1.20e-13!115;UBERON:0004765!4.31e-11!101;UBERON:0001434!4.31e-11!101;UBERON:0002298!3.82e-07!8;UBERON:0003081!9.10e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.08e-27,98;UBERON:0003061,7.08e-27,98;UBERON:0002371,5.62e-26,76;UBERON:0002193,7.09e-26,108;UBERON:0001474,1.08e-23,82;UBERON:0002405,2.76e-22,93;UBERON:0004765,4.05e-21,90;UBERON:0001434,1.77e-18,100;UBERON:0003081,8.32e-10,203;UBERON:0002204,5.76e-09,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0,0,10.5240272892764,5.18229865630367,5.40908692031792,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0,4.02769349251011,3.33008918487831,4.02019790810595,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,1.9791078011203,2.99195486432448,0.852449501065388,0,0.56738522469114,1.24564449799115,4.52247597462138,3.12889751052121,2.82345498116652,1.21079900526674,0.368277635987565,0,0.422510572623884,0,0.209658645508376,0.22465726229299,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.679856056185397,0.383220493601921,0.34362744548263,0.759059076058509,0.637130828648193,3.90650072313851,0.950452044448374,0.752875595388864,1.27986611154418,1.24930726552346,2.8413270245282,3.28451198768419,0.604820229674197,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.458426764241994,0,0,13.306443139842,9.75126528875897,16.8856609858959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.1100292252337,10.0621834009872,9.80965671105606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,8.03611346291402,10.5416969741516,0,0,0,0,0,0,0.896681151948218,0.197030760201927,1.07813787429759,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,1.01489521846434,0,1.13929437434833,0.714695326373367,0.411362273086194,0.648473311192717,1.08006287447623,1.58625035258854,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0.156679895773023,2.50634477090067,0,0.1605880751037,0,0,1.03051603426729,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0.281338832821026,0,4.77931235257603,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.272406812223151,0,0,0,0.674921674654501,3.0952078182318,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0.129282956361551,0.26446520348538,0,0,1.06787412567695,0.314408610199332,2.07119527673598,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0.250381861413,0.573409195690071,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0.601030435988874,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,1.21023041222112,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0.336283722218824,0,0.455324382702595,0.177404740325278,0.345701962667338,0,0,0,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0.588925401344836,0.297046400327086,0,0,0.563903507879121,0.322289439867886,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.387533459016037,0.186224142887574,0,0.25458863311266,0,0,0,0.202056159043763,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0,0,10.5240272892764,5.18229865630367,5.40908692031792,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0,4.02769349251011,3.33008918487831,4.02019790810595,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,1.9791078011203,2.99195486432448,0.852449501065388,0,0.56738522469114,1.24564449799115,4.52247597462138,3.12889751052121,2.82345498116652,1.21079900526674,0.368277635987565,0,0.422510572623884,0,0.209658645508376,0.22465726229299,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.679856056185397,0.383220493601921,0.34362744548263,0.759059076058509,0.637130828648193,3.90650072313851,0.950452044448374,0.752875595388864,1.27986611154418,1.24930726552346,2.8413270245282,3.28451198768419,0.604820229674197,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.458426764241994,0,0,13.306443139842,9.75126528875897,16.8856609858959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.1100292252337,10.0621834009872,9.80965671105606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,8.03611346291402,10.5416969741516,0,0,0,0,0,0,0.896681151948218,0.197030760201927,1.07813787429759,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,1.01489521846434,0,1.13929437434833,0.714695326373367,0.411362273086194,0.648473311192717,1.08006287447623,1.58625035258854,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0.156679895773023,2.50634477090067,0,0.1605880751037,0,0,1.03051603426729,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0.281338832821026,0,4.77931235257603,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.272406812223151,0,0,0,0.674921674654501,3.0952078182318,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0.129282956361551,0.26446520348538,0,0,1.06787412567695,0.314408610199332,2.07119527673598,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0.250381861413,0.573409195690071,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0.601030435988874,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,1.21023041222112,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0.336283722218824,0,0.455324382702595,0.177404740325278,0.345701962667338,0,0,0,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0.588925401344836,0.297046400327086,0,0,0.563903507879121,0.322289439867886,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.387533459016037,0.186224142887574,0,0.25458863311266,0,0,0,0.202056159043763,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | ||
|short_description=p5@SLAMF8 | |||
}} | }} |
Latest revision as of 23:32, 17 September 2015
Short description: | p5@SLAMF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLAMF8_5end |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | 1bp_to_NM_020125, uc001fue.3_5end |
EntrezGene: | SLAMF8 |
HGNC: | 21391 |
UniProt: | Q9P0V8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.26e-33 | 61 |
monopoietic cell | 9.24e-32 | 59 |
monocyte | 9.24e-32 | 59 |
monoblast | 9.24e-32 | 59 |
promonocyte | 9.24e-32 | 59 |
granulocyte monocyte progenitor cell | 3.69e-30 | 67 |
macrophage | 4.41e-28 | 6 |
myeloid lineage restricted progenitor cell | 7.07e-28 | 66 |
hematopoietic lineage restricted progenitor cell | 8.49e-27 | 120 |
nongranular leukocyte | 3.93e-26 | 115 |
myeloid leukocyte | 3.83e-25 | 72 |
leukocyte | 7.56e-23 | 136 |
hematopoietic oligopotent progenitor cell | 2.88e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.88e-21 | 161 |
defensive cell | 1.86e-20 | 48 |
phagocyte | 1.86e-20 | 48 |
myeloid cell | 3.83e-20 | 108 |
common myeloid progenitor | 3.83e-20 | 108 |
hematopoietic stem cell | 4.40e-20 | 168 |
hematopoietic cell | 1.07e-18 | 177 |
adult endothelial progenitor cell | 8.47e-15 | 3 |
immature conventional dendritic cell | 7.43e-13 | 5 |
common dendritic progenitor | 7.43e-13 | 5 |
CD8-positive, alpha-beta T cell | 8.92e-10 | 11 |
classical monocyte | 1.21e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.21e-08 | 42 |
conventional dendritic cell | 1.41e-08 | 8 |
dendritic cell | 5.13e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.08e-27 | 98 |
blood island | 7.08e-27 | 98 |
bone marrow | 5.62e-26 | 76 |
hemolymphoid system | 7.09e-26 | 108 |
bone element | 1.08e-23 | 82 |
immune system | 2.76e-22 | 93 |
skeletal element | 4.05e-21 | 90 |
skeletal system | 1.77e-18 | 100 |
lateral plate mesoderm | 8.32e-10 | 203 |
musculoskeletal system | 5.76e-09 | 167 |