FFCP PHASE1:Hg19::chr7:41956273..41956284,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:41956273..41956284,- | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr7:41956273..41956284,- | |description=CAGE_peak_at_chr7:41956273..41956284,- | ||
|id=chr7:41956273..41956284,- | |id=chr7:41956273..41956284,- | ||
|ontology_enrichment_celltype=CL:0000359;4.27e-42;32!CL:0002539;1.32e-27;10!CL:0000192;3.28e-27;43!CL:0002594;3.28e-18;4!CL:0002589;1.60e-16;2!CL:0000187;1.71e-13;55!CL:0002166;4.42e-11;3!CL:0000393;5.12e-10;61!CL:0000211;5.12e-10;61!CL:0002595;5.47e-07;5 | |ontology_enrichment_celltype=CL:0000359!4.74e-34!32;CL:0000192!5.59e-24!42;CL:0000514!5.59e-24!42;CL:0000680!3.16e-21!57;CL:0000056!3.16e-21!57;CL:0000355!3.16e-21!57;CL:0000187!3.16e-21!54;CL:0000183!3.88e-20!59;CL:0000393!3.07e-18!60;CL:0000211!3.07e-18!60;CL:0000055!3.63e-15!180;CL:0002539!6.25e-13!10;CL:0002595!4.28e-10!5;CL:0000220!1.35e-09!246;CL:0000222!1.57e-09!119;CL:0002321!2.09e-09!248;CL:0002594!3.34e-09!4;CL:0002494!7.85e-08!16;CL:0000144!1.38e-07!625;CL:0002371!2.03e-07!591;CL:0002592!5.67e-07!3;CL:0002166!5.79e-07!3;CL:0000048!9.14e-07!430 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;4.27e-42;32!CL:0002539;1.32e-27;10!CL:0000192;3.28e-27;43!CL:0002594;3.28e-18;4!CL:0002589;1.60e-16;2!CL:0000187;1.71e-13;55!CL:0002166;4.42e-11;3!CL:0000393;5.12e-10;61!CL:0000211;5.12e-10;61!CL:0002595;5.47e-07;5 | ||
|ontology_enrichment_disease=DOID:2394;7.13e-09;14 | |ontology_enrichment_celltype_v019_2=CL:0000359,4.92e-45,32;CL:0000192,7.03e-33,43;CL:0000514,7.03e-33,43;CL:0002539,9.33e-28,10;CL:0000187,3.71e-25,55;CL:0000680,1.01e-23,58;CL:0000056,1.01e-23,58;CL:0000355,1.01e-23,58;CL:0000393,1.97e-22,61;CL:0000211,1.97e-22,61;CL:0002594,2.32e-18,4;CL:0002589,1.08e-16,2;CL:0000222,1.15e-11,121;CL:0002166,3.60e-11,3;CL:0002321,1.31e-07,250;CL:0002595,7.18e-07,5 | ||
|ontology_enrichment_uberon=UBERON:0001637;4.46e-29;42!UBERON:0003509;4.46e-29;42!UBERON:0004572;4.46e-29;42!UBERON:0004237;1.32e-27;10!UBERON:0004695;1.32e-27;10!UBERON:0002111;1.32e-27;10!UBERON:0004178;1.32e-27;10!UBERON:0004573;5.39e-27;33!UBERON:0004571;5.39e-27;33!UBERON:0001135;2.87e-18;15!UBERON:0001310;3.28e-18;4!UBERON:0000947;1.56e-17;21!UBERON:0010191;1.56e-17;21!UBERON:0007500;1.26e-16;56!UBERON:0001981;1.26e-16;56!UBERON:0004537;1.26e-16;56!UBERON:0001529;1.60e-16;2!UBERON:0007204;1.60e-16;2!UBERON:0002118;3.03e-14;5!UBERON:0003914;4.07e-12;74!UBERON:0003513;2.49e-10;7!UBERON:0000055;6.87e-10;65!UBERON:0002049;7.63e-10;75!UBERON:0007798;7.63e-10;75!UBERON:0001708;1.57e-08;4!UBERON:0008895;1.57e-08;4!UBERON:0010260;2.20e-08;9!UBERON:0002385;3.95e-08;31!UBERON:0001015;3.95e-08;31!UBERON:0000383;3.95e-08;31!UBERON:0003834;5.47e-07;5!UBERON:0011159;5.47e-07;5!UBERON:0001533;5.47e-07;5 | |ontology_enrichment_development_v019=CL:0000514;3.28e-27;43!CL:0000355;1.15e-10;58 | ||
|ontology_enrichment_disease=DOID:2394!5.00e-10!14;DOID:120!1.48e-07!27;DOID:193!7.64e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.13e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.93e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.17e-28!42;UBERON:0003509!1.17e-28!42;UBERON:0004572!1.17e-28!42;UBERON:0004573!1.18e-24!33;UBERON:0004571!1.18e-24!33;UBERON:0001981!1.57e-20!60;UBERON:0007500!1.57e-20!60;UBERON:0004537!1.57e-20!60;UBERON:0006965!1.57e-20!60;UBERON:0004872!2.69e-20!84;UBERON:0002049!1.55e-19!79;UBERON:0007798!1.55e-19!79;UBERON:0001134!3.01e-19!61;UBERON:0002036!3.01e-19!61;UBERON:0003082!3.01e-19!61;UBERON:0002385!2.34e-18!63;UBERON:0001015!2.34e-18!63;UBERON:0000383!2.34e-18!63;UBERON:0000914!4.65e-18!83;UBERON:0002329!4.65e-18!83;UBERON:0003077!4.65e-18!83;UBERON:0003059!4.65e-18!83;UBERON:0007282!4.65e-18!83;UBERON:0009618!4.65e-18!83;UBERON:0007285!4.65e-18!83;UBERON:0004290!4.19e-17!70;UBERON:0004535!4.76e-17!110;UBERON:0000486!4.88e-17!82;UBERON:0000055!1.10e-16!69;UBERON:0001009!2.74e-16!113;UBERON:0003914!4.64e-15!118;UBERON:0004237!6.25e-13!10;UBERON:0004695!6.25e-13!10;UBERON:0002111!6.25e-13!10;UBERON:0004178!6.25e-13!10;UBERON:0005256!1.47e-10!143;UBERON:0002118!2.28e-10!5;UBERON:0004532!2.28e-10!5;UBERON:0003834!4.28e-10!5;UBERON:0001533!4.28e-10!5;UBERON:0000947!8.12e-10!21;UBERON:0010191!8.12e-10!21;UBERON:0001310!3.34e-09!4;UBERON:0000490!9.94e-09!138;UBERON:0003513!1.04e-08!8;UBERON:0001135!5.23e-08!15;UBERON:0000119!3.07e-07!312;UBERON:0000025!4.41e-07!194;UBERON:0000483!5.24e-07!309;UBERON:0001621!5.67e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.46e-29;42!UBERON:0003509;4.46e-29;42!UBERON:0004572;4.46e-29;42!UBERON:0004237;1.32e-27;10!UBERON:0004695;1.32e-27;10!UBERON:0002111;1.32e-27;10!UBERON:0004178;1.32e-27;10!UBERON:0004573;5.39e-27;33!UBERON:0004571;5.39e-27;33!UBERON:0001135;2.87e-18;15!UBERON:0001310;3.28e-18;4!UBERON:0000947;1.56e-17;21!UBERON:0010191;1.56e-17;21!UBERON:0007500;1.26e-16;56!UBERON:0001981;1.26e-16;56!UBERON:0004537;1.26e-16;56!UBERON:0001529;1.60e-16;2!UBERON:0007204;1.60e-16;2!UBERON:0002118;3.03e-14;5!UBERON:0003914;4.07e-12;74!UBERON:0003513;2.49e-10;7!UBERON:0000055;6.87e-10;65!UBERON:0002049;7.63e-10;75!UBERON:0007798;7.63e-10;75!UBERON:0001708;1.57e-08;4!UBERON:0008895;1.57e-08;4!UBERON:0010260;2.20e-08;9!UBERON:0002385;3.95e-08;31!UBERON:0001015;3.95e-08;31!UBERON:0000383;3.95e-08;31!UBERON:0003834;5.47e-07;5!UBERON:0011159;5.47e-07;5!UBERON:0001533;5.47e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.33e-39,42;UBERON:0003509,5.33e-39,42;UBERON:0004572,5.33e-39,42;UBERON:0004573,7.45e-32,33;UBERON:0004571,7.45e-32,33;UBERON:0007500,8.22e-31,59;UBERON:0001981,8.22e-31,59;UBERON:0004537,8.22e-31,59;UBERON:0006965,8.22e-31,59;UBERON:0004237,9.33e-28,10;UBERON:0004695,9.33e-28,10;UBERON:0002111,9.33e-28,10;UBERON:0004178,9.33e-28,10;UBERON:0000055,2.39e-26,68;UBERON:0002049,1.36e-22,78;UBERON:0007798,1.36e-22,78;UBERON:0001134,4.98e-22,62;UBERON:0002036,4.98e-22,62;UBERON:0003082,4.98e-22,62;UBERON:0002329,7.58e-22,71;UBERON:0003059,7.58e-22,71;UBERON:0007282,7.58e-22,71;UBERON:0004290,7.58e-22,71;UBERON:0009618,7.58e-22,71;UBERON:0003077,1.67e-21,72;UBERON:0007285,1.67e-21,72;UBERON:0002385,2.92e-21,64;UBERON:0001015,2.92e-21,64;UBERON:0000383,2.92e-21,64;UBERON:0007524,3.58e-21,73;UBERON:0004872,4.68e-21,83;UBERON:0000486,5.82e-21,83;UBERON:0007503,1.22e-19,78;UBERON:0001135,2.29e-18,15;UBERON:0001310,2.32e-18,4;UBERON:0000947,1.29e-17,21;UBERON:0010191,1.29e-17,21;UBERON:0001529,1.08e-16,2;UBERON:0007204,1.08e-16,2;UBERON:0004535,2.51e-15,109;UBERON:0001009,7.75e-15,112;UBERON:0002118,2.65e-14,5;UBERON:0003914,4.47e-14,117;UBERON:0005256,2.61e-13,122;UBERON:0003104,7.94e-11,160;UBERON:0009142,7.94e-11,160;UBERON:0000490,1.89e-10,148;UBERON:0003513,3.43e-10,7;UBERON:0002204,7.28e-09,167;UBERON:0001708,1.35e-08,4;UBERON:0008895,1.35e-08,4;UBERON:0010260,1.89e-08,9;UBERON:0003081,7.51e-08,203;UBERON:0000025,2.31e-07,192;UBERON:0000926,4.74e-07,315;UBERON:0004120,4.74e-07,315;UBERON:0006603,4.74e-07,315;UBERON:0011159,4.85e-07,5;UBERON:0002100,5.16e-07,199;UBERON:0003834,7.18e-07,5;UBERON:0001533,7.18e-07,5 | |||
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|short_description=p@chr7:41956273..41956284,- | |short_description=p@chr7:41956273..41956284,- | ||
}} | }} |
Latest revision as of 10:04, 31 July 2015
Short description: | p@chr7:41956273..41956284, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:41956273..41956284, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.92e-45 | 32 |
smooth muscle cell | 7.03e-33 | 43 |
smooth muscle myoblast | 7.03e-33 | 43 |
aortic smooth muscle cell | 9.33e-28 | 10 |
muscle cell | 3.71e-25 | 55 |
muscle precursor cell | 1.01e-23 | 58 |
myoblast | 1.01e-23 | 58 |
multi-potent skeletal muscle stem cell | 1.01e-23 | 58 |
electrically responsive cell | 1.97e-22 | 61 |
electrically active cell | 1.97e-22 | 61 |
smooth muscle cell of the umbilical artery | 2.32e-18 | 4 |
smooth muscle cell of the brachiocephalic vasculature | 1.08e-16 | 2 |
mesodermal cell | 1.15e-11 | 121 |
epithelial cell of Malassez | 3.60e-11 | 3 |
embryonic cell | 1.31e-07 | 250 |
smooth muscle cell of the subclavian artery | 7.18e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.93e-09 | 14 |