FFCP PHASE1:Hg19::chr11:62573349..62573363,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10482 | |EntrezGene=10482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8071 | |HGNC=8071 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBU9,Q59E96 | |UniProt=Q9UBU9,Q59E96 | ||
|association_with_transcript=-385bp_to_ENST00000294172,NM_001081491,NM_006362,uc001nvf.1,uc001nvg.1,uc009yog.1,uc010rmh.1_5end | |association_with_transcript=-385bp_to_ENST00000294172,NM_001081491,NM_006362,uc001nvf.1,uc001nvg.1,uc009yog.1,uc010rmh.1_5end | ||
|cluster_id=chr11:62573349..62573363,- | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_23_at_NXF1_5end | |description=CAGE_peak_23_at_NXF1_5end | ||
|id=chr11:62573349..62573363,- | |id=chr11:62573349..62573363,- | ||
|ontology_enrichment_celltype=CL:0002393;2.58e-74;6!CL:0002397;2.58e-74;6!CL:0000576;3.56e-12;48!CL:0000766;1.34e-09;69 | |ontology_enrichment_celltype=CL:0002057!1.32e-40!42;CL:0000860!8.77e-38!45;CL:0002194!2.69e-30!63;CL:0000576!2.69e-30!63;CL:0000040!2.69e-30!63;CL:0000559!2.69e-30!63;CL:0002009!2.55e-29!65;CL:0000766!1.02e-28!76;CL:0000839!4.06e-27!70;CL:0000557!1.03e-26!71;CL:0002393!2.64e-19!9;CL:0002397!2.64e-19!9;CL:0000763!6.79e-19!112;CL:0000049!6.79e-19!112;CL:0002087!1.33e-17!119;CL:0000738!6.80e-17!140;CL:0002031!8.21e-17!124;CL:0002032!5.31e-14!165;CL:0000837!5.31e-14!165;CL:0000037!2.43e-13!172;CL:0000566!2.43e-13!172;CL:0000988!1.75e-12!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0002393;2.58e-74;6!CL:0002397;2.58e-74;6!CL:0000576;3.56e-12;48!CL:0000766;1.34e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0002393,5.60e-50,9;CL:0002397,5.60e-50,9;CL:0000860,1.19e-19,42;CL:0002057,1.19e-19,42;CL:0000473,2.57e-17,48;CL:0000234,2.57e-17,48;CL:0002194,4.87e-14,59;CL:0000576,4.87e-14,59;CL:0000040,4.87e-14,59;CL:0000559,4.87e-14,59;CL:0002009,1.29e-13,61;CL:0000839,1.15e-12,66;CL:0000557,1.71e-12,67;CL:0000766,1.07e-11,72;CL:0000763,4.22e-08,108;CL:0000049,4.22e-08,108;CL:0002087,1.17e-07,115;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.40e-15;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.59e-23!80;UBERON:0001474!9.14e-22!86;UBERON:0004765!2.88e-18!101;UBERON:0001434!2.88e-18!101;UBERON:0002390!4.54e-18!102;UBERON:0003061!4.54e-18!102;UBERON:0002193!2.74e-16!112;UBERON:0002405!8.17e-16!115;UBERON:0002204!2.89e-10!167;UBERON:0003081!1.87e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.92e-11,76;UBERON:0001474,2.17e-10,82;UBERON:0004765,1.51e-09,90;UBERON:0002405,2.87e-09,93;UBERON:0002390,7.68e-09,98;UBERON:0003061,7.68e-09,98;UBERON:0001434,1.11e-08,100;UBERON:0002193,4.22e-08,108 | |||
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|short_description=p23@NXF1 | |short_description=p23@NXF1 | ||
}} | }} |
Latest revision as of 21:39, 18 September 2015
Short description: | p23@NXF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_NXF1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -385bp_to_ENST00000294172, NM_001081491, NM_006362, uc001nvf.1, uc001nvg.1, uc009yog.1, uc010rmh.1_5end |
EntrezGene: | NXF1 |
HGNC: | 8071 |
UniProt: | Q9UBU9Q59E96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 5.60e-50 | 9 |
CD14-positive, CD16-positive monocyte | 5.60e-50 | 9 |
classical monocyte | 1.19e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-19 | 42 |
defensive cell | 2.57e-17 | 48 |
phagocyte | 2.57e-17 | 48 |
monopoietic cell | 4.87e-14 | 59 |
monocyte | 4.87e-14 | 59 |
monoblast | 4.87e-14 | 59 |
promonocyte | 4.87e-14 | 59 |
macrophage dendritic cell progenitor | 1.29e-13 | 61 |
myeloid lineage restricted progenitor cell | 1.15e-12 | 66 |
granulocyte monocyte progenitor cell | 1.71e-12 | 67 |
myeloid leukocyte | 1.07e-11 | 72 |
myeloid cell | 4.22e-08 | 108 |
common myeloid progenitor | 4.22e-08 | 108 |
nongranular leukocyte | 1.17e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.92e-11 | 76 |
bone element | 2.17e-10 | 82 |
skeletal element | 1.51e-09 | 90 |
immune system | 2.87e-09 | 93 |
hematopoietic system | 7.68e-09 | 98 |
blood island | 7.68e-09 | 98 |
skeletal system | 1.11e-08 | 100 |
hemolymphoid system | 4.22e-08 | 108 |