FFCP PHASE1:Hg19::chr1:81772113..81772122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23266 | |EntrezGene=23266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18582 | |HGNC=18582 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=229bp_to_ENST00000469377_5end | |association_with_transcript=229bp_to_ENST00000469377_5end | ||
|cluster_id=chr1:81772113..81772122,+ | |||
|coexpression_cluster_id=C185 | |coexpression_cluster_id=C185 | ||
|description=CAGE_peak_17_at_LPHN2_5end | |description=CAGE_peak_17_at_LPHN2_5end | ||
|id=chr1:81772113..81772122,+ | |id=chr1:81772113..81772122,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0002048;4.01e-13;22!UBERON:0000117;4.01e-13;22!UBERON:0000171;4.01e-13;22!UBERON:0000170;4.01e-13;22!UBERON:0005178;5.59e-08;34!UBERON:0002224;5.59e-08;34 | |ontology_enrichment_development_v019=UBERON:0008947;3.10e-10;29!UBERON:0001041;6.23e-10;30 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002048;4.01e-13;22!UBERON:0000117;4.01e-13;22!UBERON:0000171;4.01e-13;22!UBERON:0000170;4.01e-13;22!UBERON:0005178;5.59e-08;34!UBERON:0002224;5.59e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.01e-13,22;UBERON:0000117,4.01e-13,22;UBERON:0000171,4.01e-13,22;UBERON:0000170,4.01e-13,22;UBERON:0005597,4.01e-13,22;UBERON:0000118,4.01e-13,22;UBERON:0005178,6.80e-09,34;UBERON:0002224,6.80e-09,34;UBERON:0005181,1.14e-08,35;UBERON:0005153,2.92e-08,37;UBERON:0008947,4.52e-08,38;UBERON:0003258,4.52e-08,38;UBERON:0005157,1.00e-06,47 | |||
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| ||
|short_description=p17@LPHN2 | |short_description=p17@LPHN2 | ||
}} | }} |
Latest revision as of 09:50, 19 September 2015
Short description: | p17@LPHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_LPHN2_5end |
Coexpression cluster: | C185_small_adrenal_gastric_Mesenchymal_acute_HES3GFP_testis |
Association with transcript: | 229bp_to_ENST00000469377_5end |
EntrezGene: | LPHN2 |
HGNC: | 18582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 4.01e-13 | 22 |
respiratory tube | 4.01e-13 | 22 |
respiration organ | 4.01e-13 | 22 |
pair of lungs | 4.01e-13 | 22 |
lung primordium | 4.01e-13 | 22 |
lung bud | 4.01e-13 | 22 |
thoracic cavity element | 6.80e-09 | 34 |
thoracic cavity | 6.80e-09 | 34 |
thoracic segment organ | 1.14e-08 | 35 |
epithelial bud | 2.92e-08 | 37 |
respiratory primordium | 4.52e-08 | 38 |
endoderm of foregut | 4.52e-08 | 38 |
epithelial fold | 1.00e-06 | 47 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |