FFCP PHASE1:Hg19::chr22:39916558..39916579,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=468 | |EntrezGene=468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=786 | |HGNC=786 | ||
|TSSclassifier=strong | |||
|UniProt=P18848,Q96AQ3 | |UniProt=P18848,Q96AQ3 | ||
|association_with_transcript=0bp_to_ENST00000337304,ENST00000396680,NM_001675,NM_182810,uc003axz.2,uc003aya.2,uc011aol.1_5end | |association_with_transcript=0bp_to_ENST00000337304,ENST00000396680,NM_001675,NM_182810,uc003axz.2,uc003aya.2,uc011aol.1_5end | ||
|cluster_id=chr22:39916558..39916579,+ | |||
|description=CAGE_peak_1_at_ATF4_5end | |description=CAGE_peak_1_at_ATF4_5end | ||
|id=chr22:39916558..39916579,+ | |id=chr22:39916558..39916579,+ | ||
|ontology_enrichment_celltype=CL:0000860;7.32e-17;33!CL:0002057;7.32e-17;33!CL:0000473;3.90e-09;39!CL:0000234;3.90e-09;39 | |ontology_enrichment_celltype=CL:0002057!7.63e-15!42;CL:0000860!1.62e-14!45;CL:0000063!8.82e-10!578;CL:0000012!4.56e-08!682;CL:0000548!7.80e-08!679;CL:0000004!7.80e-08!679;CL:0000255!7.80e-08!679;CL:0002320!2.98e-07!365;CL:0000134!5.82e-07!358 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;7.32e-17;33!CL:0002057;7.32e-17;33!CL:0000473;3.90e-09;39!CL:0000234;3.90e-09;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.63e-15,42;CL:0002057,7.63e-15,42;CL:0000473,4.10e-10,48;CL:0000234,4.10e-10,48;CL:0002320,3.77e-07,361;CL:0000134,7.30e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;3.06e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.24e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.38e-07,371 | |||
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3603242298,214.460321350863 | ||
|short_description=p1@ATF4 | |short_description=p1@ATF4 | ||
}} | }} |
Latest revision as of 19:00, 24 September 2015
Short description: | p1@ATF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000337304, ENST00000396680, NM_001675, NM_182810, uc003axz.2, uc003aya.2, uc011aol.1_5end |
EntrezGene: | ATF4 |
HGNC: | 786 |
UniProt: | P18848Q96AQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.63e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.63e-15 | 42 |
defensive cell | 4.10e-10 | 48 |
phagocyte | 4.10e-10 | 48 |
connective tissue cell | 3.77e-07 | 361 |
mesenchymal cell | 7.30e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.38e-07 | 371 |