FFCP PHASE1:Hg19::chr16:28898966..28898977,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=487 | |EntrezGene=487 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=811 | |HGNC=811 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=72bp_to_BX647368_5end | |association_with_transcript=72bp_to_BX647368_5end | ||
|cluster_id=chr16:28898966..28898977,+ | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_5_at_ATP2A1_5end | |description=CAGE_peak_5_at_ATP2A1_5end | ||
|id=chr16:28898966..28898977,+ | |id=chr16:28898966..28898977,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;3.58e-26;1!UBERON:0008814;7.30e-14;2!UBERON:0010056;7.30e-14;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000341;8.50e-50;2!UBERON:0001723;2.81e-34;3!UBERON:0001033;2.81e-34;3!UBERON:0000989;3.58e-26;1!UBERON:0008811;3.58e-26;1!UBERON:0002426;9.79e-26;1!UBERON:0003831;9.79e-26;1!UBERON:0003898;9.79e-26;1!UBERON:0004830;9.79e-26;1!UBERON:0003830;9.79e-26;1!UBERON:0005175;9.79e-26;1!UBERON:0001774;9.79e-26;1!UBERON:0001103;9.79e-26;1!UBERON:0000974;2.19e-17;6!UBERON:0001134;1.53e-14;16!UBERON:0002036;1.53e-14;16!UBERON:0005090;1.37e-13;2!UBERON:0001630;1.37e-13;2!UBERON:0002385;4.54e-08;31!UBERON:0001015;4.54e-08;31!UBERON:0000383;4.54e-08;31 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!2.05e-20!2;UBERON:0001630!2.49e-20!2;UBERON:0005090!2.49e-20!2;UBERON:0001829!4.90e-20!2;UBERON:0001723!3.19e-14!3;UBERON:0001033!3.19e-14!3;UBERON:0010056!3.19e-14!3;UBERON:0000078!3.05e-13!18;UBERON:0000166!2.47e-11!21;UBERON:0000989!3.08e-11!1;UBERON:0008811!3.08e-11!1;UBERON:0006258!3.08e-11!1;UBERON:0005876!3.08e-11!1;UBERON:0004874!3.08e-11!1;UBERON:0002426!4.15e-11!1;UBERON:0003831!4.15e-11!1;UBERON:0003898!4.15e-11!1;UBERON:0004830!4.15e-11!1;UBERON:0001774!4.15e-11!1;UBERON:0003830!4.15e-11!1;UBERON:0005175!4.15e-11!1;UBERON:0003897!4.15e-11!1;UBERON:0001103!4.15e-11!1;UBERON:0010084!4.15e-11!1;UBERON:0005418!5.57e-11!1;UBERON:0001389!5.57e-11!1;UBERON:0000026!5.57e-11!1;UBERON:0008784!5.57e-11!1;UBERON:0006058!5.57e-11!1;UBERON:0003663!5.57e-11!1;UBERON:0001383!5.57e-11!1;UBERON:0004256!5.57e-11!1;UBERON:0002529!5.57e-11!1;UBERON:0004708!5.57e-11!1;UBERON:0002101!5.57e-11!1;UBERON:0004709!5.57e-11!1;UBERON:0003661!5.57e-11!1;UBERON:0002471!5.57e-11!1;UBERON:0004357!5.57e-11!1;UBERON:0009872!5.57e-11!1;UBERON:0004347!5.57e-11!1;UBERON:0005420!5.57e-11!1;UBERON:0005732!5.57e-11!1;UBERON:0006057!5.57e-11!1;UBERON:0000978!5.57e-11!1;UBERON:0002103!5.57e-11!1;UBERON:0001665!5.57e-11!1;UBERON:0003823!5.57e-11!1;UBERON:0000154!5.57e-11!1;UBERON:0005733!5.57e-11!1;UBERON:0005730!5.57e-11!1;UBERON:0001831!6.14e-11!1;UBERON:0001567!6.14e-11!1;UBERON:0008801!6.14e-11!1;UBERON:0007029!6.77e-11!1;UBERON:0001736!7.46e-11!1;UBERON:0006298!7.46e-11!1;UBERON:0002372!1.77e-10!1;UBERON:0001961!1.77e-10!1;UBERON:0001744!1.77e-10!1;UBERON:0001735!1.77e-10!1;UBERON:0001042!2.88e-09!10;UBERON:0009145!2.88e-09!10;UBERON:0006562!1.81e-08!11;UBERON:0000165!1.83e-08!28;UBERON:0000930!1.83e-08!28;UBERON:0007023!2.57e-08!115;UBERON:0001004!1.68e-07!72;UBERON:0001044!2.78e-07!6;UBERON:0003293!2.78e-07!6;UBERON:0003294!2.78e-07!6;UBERON:0010047!2.78e-07!6;UBERON:0000167!2.78e-07!6;UBERON:0000161!9.79e-07!35;UBERON:0001444!9.81e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;8.50e-50;2!UBERON:0001723;2.81e-34;3!UBERON:0001033;2.81e-34;3!UBERON:0000989;3.58e-26;1!UBERON:0008811;3.58e-26;1!UBERON:0002426;9.79e-26;1!UBERON:0003831;9.79e-26;1!UBERON:0003898;9.79e-26;1!UBERON:0004830;9.79e-26;1!UBERON:0003830;9.79e-26;1!UBERON:0005175;9.79e-26;1!UBERON:0001774;9.79e-26;1!UBERON:0001103;9.79e-26;1!UBERON:0000974;2.19e-17;6!UBERON:0001134;1.53e-14;16!UBERON:0002036;1.53e-14;16!UBERON:0005090;1.37e-13;2!UBERON:0001630;1.37e-13;2!UBERON:0002385;4.54e-08;31!UBERON:0001015;4.54e-08;31!UBERON:0000383;4.54e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.09e-49,2;UBERON:0001723,2.81e-34,3;UBERON:0001033,2.81e-34,3;UBERON:0010056,2.81e-34,3;UBERON:0000989,3.58e-26,1;UBERON:0008811,3.58e-26,1;UBERON:0006258,3.58e-26,1;UBERON:0005876,3.58e-26,1;UBERON:0004874,3.58e-26,1;UBERON:0002426,7.62e-26,1;UBERON:0003831,7.62e-26,1;UBERON:0003898,7.62e-26,1;UBERON:0004830,7.62e-26,1;UBERON:0003830,7.62e-26,1;UBERON:0005175,7.62e-26,1;UBERON:0001774,7.62e-26,1;UBERON:0001103,7.62e-26,1;UBERON:0010084,7.62e-26,1;UBERON:0005090,1.21e-13,2;UBERON:0001630,1.21e-13,2;UBERON:0001042,4.89e-11,10;UBERON:0009145,4.89e-11,10;UBERON:0000974,8.06e-11,10;UBERON:0006562,4.03e-10,11;UBERON:0000153,7.88e-07,62;UBERON:0007811,7.88e-07,62 | |||
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|short_description=p5@ATP2A1 | |short_description=p5@ATP2A1 | ||
}} | }} |
Latest revision as of 01:31, 16 September 2015
Short description: | p5@ATP2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ATP2A1_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 72bp_to_BX647368_5end |
EntrezGene: | ATP2A1 |
HGNC: | 811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 1.09e-49 | 2 |
tongue | 2.81e-34 | 3 |
gustatory system | 2.81e-34 | 3 |
future tongue | 2.81e-34 | 3 |
penis | 3.58e-26 | 1 |
intromittent organ | 3.58e-26 | 1 |
lateral plate mesenchyme | 3.58e-26 | 1 |
undifferentiated genital tubercle | 3.58e-26 | 1 |
somatopleure | 3.58e-26 | 1 |
chest muscle | 7.62e-26 | 1 |
respiratory system muscle | 7.62e-26 | 1 |
skeletal muscle of trunk | 7.62e-26 | 1 |
respiratory system skeletal muscle | 7.62e-26 | 1 |
thoracic segment muscle | 7.62e-26 | 1 |
chest organ | 7.62e-26 | 1 |
muscle of trunk | 7.62e-26 | 1 |
diaphragm | 7.62e-26 | 1 |
future diaphragm | 7.62e-26 | 1 |
muscle structure | 1.21e-13 | 2 |
muscle organ | 1.21e-13 | 2 |
chordate pharynx | 4.89e-11 | 10 |
pharyngeal region of foregut | 4.89e-11 | 10 |
neck | 8.06e-11 | 10 |
pharynx | 4.03e-10 | 11 |
anterior region of body | 7.88e-07 | 62 |
craniocervical region | 7.88e-07 | 62 |