FFCP PHASE1:Hg19::chr1:157108282..157108347,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:157108282..157108347,-
|short_description=p3@ETV3
|description=CAGE_peak_3_at_ETV3_5end
|association_with_transcript=-16bp_to_ENST00000326786_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2117 | |EntrezGene=2117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3492 | |HGNC=3492 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000326786_5end | |||
|cluster_id=chr1:157108282..157108347,- | |||
|description=CAGE_peak_3_at_ETV3_5end | |||
|id=chr1:157108282..157108347,- | |||
|ontology_enrichment_celltype=CL:0000738!4.76e-18!140;CL:0000037!6.00e-15!172;CL:0000566!6.00e-15!172;CL:0000988!3.21e-13!182;CL:0002031!3.31e-13!124;CL:0002032!1.31e-12!165;CL:0000837!1.31e-12!165;CL:0002087!2.01e-12!119;CL:0000557!2.19e-12!71;CL:0000766!1.06e-11!76;CL:0000839!1.03e-10!70;CL:0000219!1.46e-10!390;CL:0002009!1.55e-10!65;CL:0000134!2.00e-10!358;CL:0002320!2.34e-10!365;CL:0000763!3.29e-10!112;CL:0000049!3.29e-10!112;CL:0002057!4.96e-10!42;CL:0000860!9.28e-10!45;CL:0002194!1.31e-09!63;CL:0000576!1.31e-09!63;CL:0000040!1.31e-09!63;CL:0000559!1.31e-09!63;CL:0000791!5.78e-08!18;CL:0000789!5.78e-08!18;CL:0002420!5.78e-08!18;CL:0002419!5.78e-08!18;CL:0000790!5.78e-08!18;CL:0000451!6.13e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.69e-12;33!CL:0002057;8.69e-12;33!CL:0000451;5.26e-09;10!CL:0000791;2.09e-08;18!CL:0000789;2.09e-08;18!CL:0002419;2.09e-08;18!CL:0000473;2.34e-08;39!CL:0000234;2.34e-08;39!CL:0000990;1.66e-07;8!CL:0000576;3.98e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.31e-21,136;CL:0000037,1.82e-16,168;CL:0000988,7.92e-15,177;CL:0002031,1.01e-14,120;CL:0000557,6.54e-14,67;CL:0002032,7.97e-14,161;CL:0000837,7.97e-14,161;CL:0002087,8.02e-14,115;CL:0000766,1.20e-13,72;CL:0000839,5.54e-12,66;CL:0002009,8.60e-12,61;CL:0000219,9.19e-12,386;CL:0000134,9.83e-12,354;CL:0000860,1.92e-11,42;CL:0002057,1.92e-11,42;CL:0000763,4.10e-11,108;CL:0000049,4.10e-11,108;CL:0002320,4.42e-11,361;CL:0002194,1.01e-10,59;CL:0000576,1.01e-10,59;CL:0000040,1.01e-10,59;CL:0000559,1.01e-10,59;CL:0000473,8.40e-10,48;CL:0000234,8.40e-10,48;CL:0000451,8.91e-09,10;CL:0000791,2.12e-08,18;CL:0000789,2.12e-08,18;CL:0002420,2.12e-08,18;CL:0002419,2.12e-08,18;CL:0000790,2.12e-08,18;CL:0000048,4.55e-08,427;CL:0000723,1.70e-07,433;CL:0000034,2.11e-07,441;CL:0000990,2.44e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-08;42!CL:0000790;2.09e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.34e-11!86;UBERON:0002384!9.21e-11!375;UBERON:0002371!1.13e-10!80;UBERON:0004765!8.52e-10!101;UBERON:0001434!8.52e-10!101;UBERON:0002390!7.88e-09!102;UBERON:0003061!7.88e-09!102;UBERON:0002193!1.32e-07!112;UBERON:0002405!2.64e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.21e-13,82;UBERON:0002371,1.95e-12,76;UBERON:0002384,2.08e-11,371;UBERON:0004765,4.87e-11,90;UBERON:0001434,4.21e-10,100;UBERON:0002390,7.80e-10,98;UBERON:0003061,7.80e-10,98;UBERON:0002405,2.12e-09,93;UBERON:0002193,2.34e-08,108 | |||
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| ||
|short_description=p3@ETV3 | |||
}} | }} |
Latest revision as of 18:55, 17 September 2015
Short description: | p3@ETV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ETV3_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000326786_5end |
EntrezGene: | ETV3 |
HGNC: | 3492 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone element | 3.21e-13 | 82 |
bone marrow | 1.95e-12 | 76 |
connective tissue | 2.08e-11 | 371 |
skeletal element | 4.87e-11 | 90 |
skeletal system | 4.21e-10 | 100 |
hematopoietic system | 7.80e-10 | 98 |
blood island | 7.80e-10 | 98 |
immune system | 2.12e-09 | 93 |
hemolymphoid system | 2.34e-08 | 108 |