FFCP PHASE1:Hg19::chr5:142254387..142254415,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23092 | |EntrezGene=23092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17073 | |HGNC=17073 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENST00000475287_5end | |association_with_transcript=-42bp_to_ENST00000475287_5end | ||
|cluster_id=chr5:142254387..142254415,+ | |||
|coexpression_cluster_id=C264 | |coexpression_cluster_id=C264 | ||
|description=CAGE_peak_7_at_ARHGAP26_5end | |description=CAGE_peak_7_at_ARHGAP26_5end | ||
|id=chr5:142254387..142254415,+ | |id=chr5:142254387..142254415,+ | ||
|ontology_enrichment_celltype=CL:0000222;6.02e-09;1!CL:0000167;1.97e-08;1!CL:0000164;1.97e-08;1!CL:0000502;1.97e-08;1!CL:0000172;1.97e-08;1!CL:0000173;1.97e-08;1 | |ontology_enrichment_celltype=CL:0000066!1.14e-09!254 | ||
| | |ontology_enrichment_celltype_v019=CL:0000222;6.02e-09;1!CL:0000167;1.97e-08;1!CL:0000164;1.97e-08;1!CL:0000502;1.97e-08;1!CL:0000172;1.97e-08;1!CL:0000173;1.97e-08;1 | ||
|ontology_enrichment_disease=DOID:0060085;1.97e-08;1!DOID:3165;1.97e-08;1!DOID:0060121;1.97e-08;1!DOID:2438;1.97e-08;1!DOID:4418;1.97e-08;1!DOID:4430;1.97e-08;1 | |ontology_enrichment_celltype_v019_2=CL:0000167,2.84e-08,1;CL:0000164,2.84e-08,1;CL:0000502,2.84e-08,1;CL:0000172,2.84e-08,1;CL:0000173,2.84e-08,1;CL:0002351,2.84e-08,1 | ||
|ontology_enrichment_uberon=UBERON:0002134;1.97e-08;1!UBERON:0002171;1.97e-08;1!UBERON:0005208;1.97e-08;1!UBERON:0006518;1.97e-08;1!UBERON:0008949;1.97e-08;1!UBERON:0004145;1.97e-08;1!UBERON:0005946;1.97e-08;1!UBERON:0000101;1.97e-08;1!UBERON:0005965;1.97e-08;1!UBERON:0002167;1.97e-08;1!UBERON:0002078;1.97e-08;1 | |ontology_enrichment_development_v019=UBERON:0008425;6.49e-09;1!CL:0002351;1.97e-08;1 | ||
|ontology_enrichment_disease=DOID:305!9.46e-10!106;DOID:0050687!7.79e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.97e-08;1!DOID:3165;1.97e-08;1!DOID:0060121;1.97e-08;1!DOID:2438;1.97e-08;1!DOID:4418;1.97e-08;1!DOID:4430;1.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.02e-08,1;DOID:3165,1.02e-08,1;DOID:0060121,1.02e-08,1;DOID:2438,1.02e-08,1;DOID:4418,1.02e-08,1;DOID:4430,2.84e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001041!1.40e-11!98;UBERON:0000065!2.23e-11!53;UBERON:0001048!2.26e-11!168;UBERON:0004119!2.32e-11!169;UBERON:0000925!2.32e-11!169;UBERON:0006595!2.32e-11!169;UBERON:0004921!4.12e-10!129;UBERON:0004185!4.12e-10!129;UBERON:0001007!5.40e-10!155;UBERON:0001555!5.40e-10!155;UBERON:0007026!5.40e-10!155;UBERON:0001004!5.68e-10!72;UBERON:0001737!7.45e-10!9;UBERON:0000481!1.30e-09!347;UBERON:0000077!1.62e-09!130;UBERON:0008947!3.72e-09!38;UBERON:0003258!3.72e-09!38;UBERON:0000072!8.56e-08!46;UBERON:0001557!1.27e-07!19;UBERON:0000477!1.44e-07!286;UBERON:0003104!4.04e-07!238;UBERON:0009142!4.04e-07!238;UBERON:0000063!4.22e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.97e-08;1!UBERON:0002171;1.97e-08;1!UBERON:0005208;1.97e-08;1!UBERON:0006518;1.97e-08;1!UBERON:0008949;1.97e-08;1!UBERON:0004145;1.97e-08;1!UBERON:0005946;1.97e-08;1!UBERON:0000101;1.97e-08;1!UBERON:0005965;1.97e-08;1!UBERON:0002167;1.97e-08;1!UBERON:0002078;1.97e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.18e-08,1;UBERON:0006518,1.18e-08,1;UBERON:0008949,1.18e-08,1;UBERON:0000101,1.18e-08,1;UBERON:0002167,1.18e-08,1;UBERON:0002134,1.84e-08,1;UBERON:0005208,1.84e-08,1;UBERON:0005946,1.84e-08,1;UBERON:0005965,1.84e-08,1;UBERON:0002078,1.84e-08,1 | |||
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| ||
|short_description=p7@ARHGAP26 | |short_description=p7@ARHGAP26 | ||
}} | }} |
Latest revision as of 07:21, 25 September 2015
Short description: | p7@ARHGAP26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARHGAP26_5end |
Coexpression cluster: | C264_giant_keratoacanthoma_colon_fibrosarcoma_HES3GFP_Hep2_acute |
Association with transcript: | -42bp_to_ENST00000475287_5end |
EntrezGene: | ARHGAP26 |
HGNC: | 17073 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.84e-08 | 1 |
enteroendocrine cell | 2.84e-08 | 1 |
type D enteroendocrine cell | 2.84e-08 | 1 |
somatostatin secreting cell | 2.84e-08 | 1 |
pancreatic D cell | 2.84e-08 | 1 |
progenitor cell of endocrine pancreas | 2.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.18e-08 | 1 |
right lung lobe | 1.18e-08 | 1 |
lower lobe of lung | 1.18e-08 | 1 |
lobe of lung | 1.18e-08 | 1 |
right lung | 1.18e-08 | 1 |
tricuspid valve | 1.84e-08 | 1 |
right atrium valve | 1.84e-08 | 1 |
outflow tract of atrium | 1.84e-08 | 1 |
outflow part of right atrium | 1.84e-08 | 1 |
right cardiac atrium | 1.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.02e-08 | 1 |
skin benign neoplasm | 1.02e-08 | 1 |
integumentary system benign neoplasm | 1.02e-08 | 1 |
dermis tumor | 1.02e-08 | 1 |
cutaneous fibrous histiocytoma | 1.02e-08 | 1 |
somatostatinoma | 2.84e-08 | 1 |