FFCP PHASE1:Hg19::chr7:92164834..92164839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:92164834..92164839,+ | |||
|description=CAGE_peak_at_chr7:92164834..92164839,+ | |description=CAGE_peak_at_chr7:92164834..92164839,+ | ||
|id=chr7:92164834..92164839,+ | |id=chr7:92164834..92164839,+ | ||
|ontology_enrichment_celltype=CL:0000322;9.43e-11;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000322;9.43e-11;3 | ||
|ontology_enrichment_disease=DOID:3910;1.91e-15;2!DOID:3908;5.86e-07;5 | |ontology_enrichment_celltype_v019_2=CL:0000322,1.09e-10,3 | ||
|ontology_enrichment_uberon=UBERON:0002038;2.05e-29;1!UBERON:0009661;2.05e-29;1!UBERON:0002950;2.05e-29;1!UBERON:0001891;2.05e-29;1!UBERON:0004903;1.91e-15;2!UBERON:0002173;1.91e-15;2!UBERON:0002186;1.91e-15;2!UBERON:0004821;9.43e-11;3!UBERON:0007499;9.43e-11;3!UBERON:0003215;9.43e-11;3!UBERON:0010368;9.43e-11;3!UBERON:0009911;9.43e-11;3!UBERON:0002299;9.43e-11;3!UBERON:0006524;9.43e-11;3!UBERON:0008874;9.43e-11;3!UBERON:0002169;9.43e-11;3!UBERON:0004894;9.43e-11;3!UBERON:0009856;2.18e-08;4!UBERON:0002791;2.16e-07;32!UBERON:0001872;5.86e-07;5!UBERON:0002021;5.86e-07;5 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;1.91e-15;2!DOID:3908;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.37e-15,2;DOID:3908,6.39e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.87e-11!57;UBERON:0005068!2.87e-11!57;UBERON:0006241!2.87e-11!57;UBERON:0007135!2.87e-11!57;UBERON:0002346!2.05e-10!90;UBERON:0002616!1.06e-08!59;UBERON:0002020!1.48e-08!34;UBERON:0003528!1.48e-08!34;UBERON:0003075!1.76e-08!86;UBERON:0007284!1.76e-08!86;UBERON:0000955!3.96e-08!69;UBERON:0006238!3.96e-08!69;UBERON:0002780!4.80e-08!41;UBERON:0001890!4.80e-08!41;UBERON:0006240!4.80e-08!41;UBERON:0003080!1.01e-07!42;UBERON:0001017!1.41e-07!82;UBERON:0001893!3.16e-07!34;UBERON:0005743!7.63e-07!86;UBERON:0002791!8.53e-07!33;UBERON:0001869!8.95e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;2.05e-29;1!UBERON:0009661;2.05e-29;1!UBERON:0002950;2.05e-29;1!UBERON:0001891;2.05e-29;1!UBERON:0004903;1.91e-15;2!UBERON:0002173;1.91e-15;2!UBERON:0002186;1.91e-15;2!UBERON:0004821;9.43e-11;3!UBERON:0007499;9.43e-11;3!UBERON:0003215;9.43e-11;3!UBERON:0010368;9.43e-11;3!UBERON:0009911;9.43e-11;3!UBERON:0002299;9.43e-11;3!UBERON:0006524;9.43e-11;3!UBERON:0008874;9.43e-11;3!UBERON:0002169;9.43e-11;3!UBERON:0004894;9.43e-11;3!UBERON:0009856;2.18e-08;4!UBERON:0002791;2.16e-07;32!UBERON:0001872;5.86e-07;5!UBERON:0002021;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,2.37e-29,1;UBERON:0009661,2.37e-29,1;UBERON:0002950,2.37e-29,1;UBERON:0001891,2.37e-29,1;UBERON:0009616,2.37e-29,1;UBERON:0010286,2.37e-29,1;UBERON:0004903,2.37e-15,2;UBERON:0002173,2.37e-15,2;UBERON:0002186,2.37e-15,2;UBERON:0004821,1.09e-10,3;UBERON:0003215,1.09e-10,3;UBERON:0010368,1.09e-10,3;UBERON:0009911,1.09e-10,3;UBERON:0002299,1.09e-10,3;UBERON:0006524,1.09e-10,3;UBERON:0008874,1.09e-10,3;UBERON:0002169,1.09e-10,3;UBERON:0004894,1.09e-10,3;UBERON:0002791,2.06e-08,32;UBERON:0003528,5.73e-08,34;UBERON:0002020,5.73e-08,34;UBERON:0001893,5.73e-08,34;UBERON:0002021,5.08e-07,5;UBERON:0001872,6.77e-07,5;UBERON:0002780,9.61e-07,41;UBERON:0001890,9.61e-07,41;UBERON:0003080,9.61e-07,41;UBERON:0006240,9.61e-07,41 | |||
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| ||
|short_description=p@chr7:92164834..92164839,+ | |short_description=p@chr7:92164834..92164839,+ | ||
}} | }} |
Latest revision as of 12:30, 31 July 2015
Short description: | p@chr7:92164834..92164839, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:92164834..92164839, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 2.37e-29 | 1 |
midbrain nucleus | 2.37e-29 | 1 |
regional part of midbrain | 2.37e-29 | 1 |
midbrain | 2.37e-29 | 1 |
presumptive midbrain | 2.37e-29 | 1 |
midbrain neural tube | 2.37e-29 | 1 |
bronchoalveolar duct junction | 2.37e-15 | 2 |
alveolar duct | 2.37e-15 | 2 |
bronchiole | 2.37e-15 | 2 |
pulmonary alveolus epithelium | 1.09e-10 | 3 |
alveolus | 1.09e-10 | 3 |
pulmonary lobule | 1.09e-10 | 3 |
lobule | 1.09e-10 | 3 |
alveolus of lung | 1.09e-10 | 3 |
alveolar system | 1.09e-10 | 3 |
pulmonary acinus | 1.09e-10 | 3 |
alveolar sac | 1.09e-10 | 3 |
alveolar wall | 1.09e-10 | 3 |
regional part of telencephalon | 2.06e-08 | 32 |
brain grey matter | 5.73e-08 | 34 |
gray matter | 5.73e-08 | 34 |
telencephalon | 5.73e-08 | 34 |
occipital lobe | 5.08e-07 | 5 |
parietal lobe | 6.77e-07 | 5 |
regional part of forebrain | 9.61e-07 | 41 |
forebrain | 9.61e-07 | 41 |
anterior neural tube | 9.61e-07 | 41 |
future forebrain | 9.61e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.37e-15 | 2 |
non-small cell lung carcinoma | 6.39e-07 | 5 |