FFCP PHASE1:Hg19::chr2:231191875..231191918,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93349 | |EntrezGene=93349 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25105 | |HGNC=25105 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H930 | |UniProt=Q9H930 | ||
|association_with_transcript=0bp_to_ENST00000415673,ENST00000444636,NM_138402,uc010fxm.1_5end | |association_with_transcript=0bp_to_ENST00000415673,ENST00000444636,NM_138402,uc010fxm.1_5end | ||
|cluster_id=chr2:231191875..231191918,+ | |||
|coexpression_cluster_id=C2578 | |coexpression_cluster_id=C2578 | ||
|description=CAGE_peak_1_at_SP140L_5end | |description=CAGE_peak_1_at_SP140L_5end | ||
|id=chr2:231191875..231191918,+ | |id=chr2:231191875..231191918,+ | ||
|ontology_enrichment_celltype=CL:0000860;1.78e-12;33!CL:0002057;1.78e-12;33!CL:0002087;3.56e-12;104!CL:0000576;9.90e-12;48!CL:0000473;1.82e-11;39!CL:0000234;1.82e-11;39!CL:0000791;3.12e-11;18!CL:0000789;3.12e-11;18!CL:0002419;3.12e-11;18!CL:0000766;7.14e-11;69!CL:0000084;3.08e-10;25!CL:0000542;5.26e-10;53!CL:0000738;2.49e-09;136!CL:0000236;4.10e-08;13!CL:0000625;8.36e-08;11!CL:0000988;2.75e-07;177 | |ontology_enrichment_celltype=CL:0000738!9.79e-41!140;CL:0000037!2.09e-36!172;CL:0000566!2.09e-36!172;CL:0002087!6.91e-36!119;CL:0002031!9.81e-35!124;CL:0002032!4.97e-34!165;CL:0000837!4.97e-34!165;CL:0000988!2.11e-33!182;CL:0000134!1.30e-22!358;CL:0000766!3.68e-22!76;CL:0002320!7.14e-22!365;CL:0000557!1.23e-18!71;CL:0000839!1.71e-18!70;CL:0000048!1.95e-18!430;CL:0002057!1.99e-17!42;CL:0002194!2.01e-17!63;CL:0000576!2.01e-17!63;CL:0000040!2.01e-17!63;CL:0000559!2.01e-17!63;CL:0000763!2.40e-17!112;CL:0000049!2.40e-17!112;CL:0002009!1.07e-16!65;CL:0000723!1.29e-16!436;CL:0000838!1.54e-16!52;CL:0000542!2.39e-16!53;CL:0000051!2.39e-16!53;CL:0000034!1.13e-15!444;CL:0000219!2.41e-15!390;CL:0000860!3.61e-15!45;CL:0000791!3.32e-11!18;CL:0000789!3.32e-11!18;CL:0002420!3.32e-11!18;CL:0002419!3.32e-11!18;CL:0000790!3.32e-11!18;CL:0000084!3.14e-10!25;CL:0000827!3.14e-10!25;CL:0000236!5.96e-08!14;CL:0000625!8.95e-08!11 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.78e-12;33!CL:0002057;1.78e-12;33!CL:0002087;3.56e-12;104!CL:0000576;9.90e-12;48!CL:0000473;1.82e-11;39!CL:0000234;1.82e-11;39!CL:0000791;3.12e-11;18!CL:0000789;3.12e-11;18!CL:0002419;3.12e-11;18!CL:0000766;7.14e-11;69!CL:0000084;3.08e-10;25!CL:0000542;5.26e-10;53!CL:0000738;2.49e-09;136!CL:0000236;4.10e-08;13!CL:0000625;8.36e-08;11!CL:0000988;2.75e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.06e-42,136;CL:0000037,1.19e-37,168;CL:0002087,1.23e-37,115;CL:0002031,2.24e-36,120;CL:0002032,2.97e-35,161;CL:0000837,2.97e-35,161;CL:0000988,7.84e-35,177;CL:0000766,6.81e-24,72;CL:0000134,1.25e-23,354;CL:0002320,7.34e-23,361;CL:0000557,3.21e-20,67;CL:0000839,4.36e-20,66;CL:0000048,1.34e-19,427;CL:0002194,4.40e-19,59;CL:0000576,4.40e-19,59;CL:0000040,4.40e-19,59;CL:0000559,4.40e-19,59;CL:0000473,1.23e-18,48;CL:0000234,1.23e-18,48;CL:0000763,2.46e-18,108;CL:0000049,2.46e-18,108;CL:0002009,2.97e-18,61;CL:0000723,9.63e-18,433;CL:0000860,1.95e-17,42;CL:0002057,1.95e-17,42;CL:0000034,9.71e-17,441;CL:0000838,1.51e-16,52;CL:0000542,2.34e-16,53;CL:0000051,2.34e-16,53;CL:0000219,3.55e-16,386;CL:0000791,3.28e-11,18;CL:0000789,3.28e-11,18;CL:0002420,3.28e-11,18;CL:0002419,3.28e-11,18;CL:0000790,3.28e-11,18;CL:0000084,3.11e-10,25;CL:0000827,3.11e-10,25;CL:0000236,5.91e-08,14;CL:0000625,8.88e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.46e-12;42!CL:0000790;3.12e-11;18!CL:0000051;5.26e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.20e-25!112;UBERON:0002390!1.60e-24!102;UBERON:0003061!1.60e-24!102;UBERON:0002384!5.67e-22!375;UBERON:0002371!2.47e-17!80;UBERON:0001474!2.79e-16!86;UBERON:0002405!3.30e-16!115;UBERON:0004765!3.69e-13!101;UBERON:0001434!3.69e-13!101;UBERON:0003081!2.27e-10!216;UBERON:0002204!5.95e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.03e-26,108;UBERON:0002390,5.55e-26,98;UBERON:0003061,5.55e-26,98;UBERON:0002384,6.77e-23,371;UBERON:0002405,2.22e-21,93;UBERON:0002371,1.12e-18,76;UBERON:0001474,1.66e-17,82;UBERON:0004765,3.20e-16,90;UBERON:0001434,5.46e-14,100;UBERON:0003081,1.83e-12,203;UBERON:0002204,1.35e-08,167;UBERON:0000926,3.15e-07,315;UBERON:0004120,3.15e-07,315;UBERON:0006603,3.15e-07,315 | |||
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| ||
|short_description=p1@SP140L | |short_description=p1@SP140L | ||
}} | }} |
Latest revision as of 06:24, 25 September 2015
Short description: | p1@SP140L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SP140L_5end |
Coexpression cluster: | C2578_Eosinophils_CD14_CD19_Neutrophils_CD4_Whole_CD14CD16 |
Association with transcript: | 0bp_to_ENST00000415673, ENST00000444636, NM_138402, uc010fxm.1_5end |
EntrezGene: | SP140L |
HGNC: | 25105 |
UniProt: | Q9H930 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.03e-26 | 108 |
hematopoietic system | 5.55e-26 | 98 |
blood island | 5.55e-26 | 98 |
connective tissue | 6.77e-23 | 371 |
immune system | 2.22e-21 | 93 |
bone marrow | 1.12e-18 | 76 |
bone element | 1.66e-17 | 82 |
skeletal element | 3.20e-16 | 90 |
skeletal system | 5.46e-14 | 100 |
lateral plate mesoderm | 1.83e-12 | 203 |
musculoskeletal system | 1.35e-08 | 167 |
mesoderm | 3.15e-07 | 315 |
mesoderm-derived structure | 3.15e-07 | 315 |
presumptive mesoderm | 3.15e-07 | 315 |