FFCP PHASE1:Hg19::chr15:60788050..60788061,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6095 | |EntrezGene=6095 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10258 | |HGNC=10258 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-97bp_to_AK055969_5end | |association_with_transcript=-97bp_to_AK055969_5end | ||
|cluster_id=chr15:60788050..60788061,- | |||
|description=CAGE_peak_10_at_RORA_5end | |description=CAGE_peak_10_at_RORA_5end | ||
|id=chr15:60788050..60788061,- | |id=chr15:60788050..60788061,- | ||
|ontology_enrichment_celltype=CL:0000623;3.48e-23;3!CL:0000791;3.84e-23;18!CL:0000789;3.84e-23;18!CL:0002419;3.84e-23;18!CL:0000084;1.05e-16;25!CL:0000625;2.75e-14;11!CL:0000624;4.68e-12;6!CL:0001014;1.51e-09;2!CL:0002593;1.51e-09;2!CL:0001016;1.51e-09;2!CL:0000542;1.55e-08;53 | |ontology_enrichment_celltype=CL:0000791!1.47e-12!18;CL:0000789!1.47e-12!18;CL:0002420!1.47e-12!18;CL:0002419!1.47e-12!18;CL:0000790!1.47e-12!18;CL:0000084!4.25e-11!25;CL:0000827!4.25e-11!25;CL:0000625!4.77e-08!11;CL:0000838!9.03e-08!52;CL:0000542!1.62e-07!53;CL:0000051!1.62e-07!53 | ||
| | |ontology_enrichment_celltype_v019=CL:0000623;3.48e-23;3!CL:0000791;3.84e-23;18!CL:0000789;3.84e-23;18!CL:0002419;3.84e-23;18!CL:0000084;1.05e-16;25!CL:0000625;2.75e-14;11!CL:0000624;4.68e-12;6!CL:0001014;1.51e-09;2!CL:0002593;1.51e-09;2!CL:0001016;1.51e-09;2!CL:0000542;1.55e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.35e-23,3;CL:0000825,2.35e-23,3;CL:0000791,4.22e-23,18;CL:0000789,4.22e-23,18;CL:0002420,4.22e-23,18;CL:0002419,4.22e-23,18;CL:0000790,4.22e-23,18;CL:0000084,1.12e-16,25;CL:0000827,1.12e-16,25;CL:0000838,2.51e-15,52;CL:0000542,4.97e-15,53;CL:0000051,4.97e-15,53;CL:0000625,2.82e-14,11;CL:0000624,5.08e-12,6;CL:0001014,1.33e-09,2;CL:0001016,1.33e-09,2;CL:0002593,2.02e-09,2;CL:0002031,3.10e-08,120;CL:0000738,3.39e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;3.84e-23;18!CL:0000051;1.55e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002426;9.48e-18;1!UBERON:0003831;9.48e-18;1!UBERON:0003898;9.48e-18;1!UBERON:0004830;9.48e-18;1!UBERON:0003830;9.48e-18;1!UBERON:0005175;9.48e-18;1!UBERON:0001774;9.48e-18;1!UBERON:0001103;9.48e-18;1!UBERON:0005090;1.51e-09;2!UBERON:0001630;1.51e-09;2!UBERON:0002456;1.51e-09;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;9.48e-18;1!UBERON:0003831;9.48e-18;1!UBERON:0003898;9.48e-18;1!UBERON:0004830;9.48e-18;1!UBERON:0003830;9.48e-18;1!UBERON:0005175;9.48e-18;1!UBERON:0001774;9.48e-18;1!UBERON:0001103;9.48e-18;1!UBERON:0005090;1.51e-09;2!UBERON:0001630;1.51e-09;2!UBERON:0002456;1.51e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,6.23e-18,1;UBERON:0003831,6.23e-18,1;UBERON:0003898,6.23e-18,1;UBERON:0004830,6.23e-18,1;UBERON:0003830,6.23e-18,1;UBERON:0005175,6.23e-18,1;UBERON:0001774,6.23e-18,1;UBERON:0001103,6.23e-18,1;UBERON:0010084,6.23e-18,1;UBERON:0005090,1.22e-09,2;UBERON:0001630,1.22e-09,2;UBERON:0002456,2.02e-09,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0.590129310341499,2.35806457649499,1.23360899399706,0,0.651844533267181,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0.276350017785848,0,0,0.535081656179426,0,0.113309342697566,0,0.34362744548263,0.506039384039006,0.95569624297229,1.30216690771284,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.403213486449465,2.13952156626806,2.46201486600758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,3.01878604803324,1.66845947163673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0.511707249066704,0,0,0.308419387605311,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0.290033387828457,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0.23874448473769,0,0.921482106297696,0,0,0.222617410045812,0.494411622680279,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.889563386041866,0.370691816839509,0.208843899010911,0,1.60515529459758,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0.254019996197353,0,0.544813624446302,0,0,0.415440338029185,0,1.5476039091159,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.66116300871345,0,0,0.106787412567695,0,0,0,1.38328142328561,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.554645257684261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0.363697318405119,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0.436838552768056,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0.47775168788705,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0.233939463462106,0,0.118920090777569,0.11294608203896,0.439762066981716,0.150962843566674,0.0771741581079447,0.218559560503957,0,0.245148321753905,0.471353094203252,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0.573358332605805,0,0.135982980381829,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0.213233981900981,0,0,0,0.33639558774184,0.12729431655633,0.808468755832877,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p10@RORA | |short_description=p10@RORA | ||
}} | }} |
Latest revision as of 10:11, 18 September 2015
Short description: | p10@RORA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RORA_5end |
Coexpression cluster: | NA |
Association with transcript: | -97bp_to_AK055969_5end |
EntrezGene: | RORA |
HGNC: | 10258 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.35e-23 | 3 |
pro-NK cell | 2.35e-23 | 3 |
mature alpha-beta T cell | 4.22e-23 | 18 |
alpha-beta T cell | 4.22e-23 | 18 |
immature T cell | 4.22e-23 | 18 |
mature T cell | 4.22e-23 | 18 |
immature alpha-beta T cell | 4.22e-23 | 18 |
T cell | 1.12e-16 | 25 |
pro-T cell | 1.12e-16 | 25 |
lymphoid lineage restricted progenitor cell | 2.51e-15 | 52 |
lymphocyte | 4.97e-15 | 53 |
common lymphoid progenitor | 4.97e-15 | 53 |
CD8-positive, alpha-beta T cell | 2.82e-14 | 11 |
CD4-positive, alpha-beta T cell | 5.08e-12 | 6 |
CD1a-positive Langerhans cell | 1.33e-09 | 2 |
immature CD1a-positive Langerhans cell | 1.33e-09 | 2 |
smooth muscle cell of the internal thoracic artery | 2.02e-09 | 2 |
hematopoietic lineage restricted progenitor cell | 3.10e-08 | 120 |
leukocyte | 3.39e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 6.23e-18 | 1 |
respiratory system muscle | 6.23e-18 | 1 |
skeletal muscle of trunk | 6.23e-18 | 1 |
respiratory system skeletal muscle | 6.23e-18 | 1 |
thoracic segment muscle | 6.23e-18 | 1 |
chest organ | 6.23e-18 | 1 |
muscle of trunk | 6.23e-18 | 1 |
diaphragm | 6.23e-18 | 1 |
future diaphragm | 6.23e-18 | 1 |
muscle structure | 1.22e-09 | 2 |
muscle organ | 1.22e-09 | 2 |
internal thoracic artery | 2.02e-09 | 2 |