FFCP PHASE1:Hg19::chr12:98909260..98909273,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7112 | |EntrezGene=7112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11875 | |HGNC=11875 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000556029_5end | |association_with_transcript=-16bp_to_ENST00000556029_5end | ||
|cluster_id=chr12:98909260..98909273,+ | |||
|description=CAGE_peak_4_at_TMPO_5end | |description=CAGE_peak_4_at_TMPO_5end | ||
|id=chr12:98909260..98909273,+ | |id=chr12:98909260..98909273,+ | ||
|ontology_enrichment_celltype=CL:0000875;3.95e-18;3!CL:0002396;3.95e-18;3!CL:0002032;1.85e-07;1!CL:0000557;1.85e-07;1!CL:0000511;4.97e-07;1!CL:0002625;4.97e-07;1!CL:0000817;4.97e-07;1!CL:0000216;4.97e-07;1!CL:0002563;7.29e-07;4 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000875;3.95e-18;3!CL:0002396;3.95e-18;3!CL:0002032;1.85e-07;1!CL:0000557;1.85e-07;1!CL:0000511;4.97e-07;1!CL:0002625;4.97e-07;1!CL:0000817;4.97e-07;1!CL:0000216;4.97e-07;1!CL:0002563;7.29e-07;4 | ||
|ontology_enrichment_disease=DOID:1799;1.85e-07;1!DOID:10165;1.85e-07;1!DOID:1798;1.85e-07;1!DOID:6193;4.97e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0000875,1.76e-18,3;CL:0002396,1.76e-18,3;CL:0000511,2.67e-07,1;CL:0002625,2.67e-07,1;CL:0000216,2.67e-07,1;CL:0002563,9.21e-07,4 | ||
|ontology_enrichment_uberon=UBERON:0001136;4.97e-07;1!UBERON:0001343;4.97e-07;1!UBERON:0004910;4.97e-07;1!UBERON:0004813;4.97e-07;1!UBERON:0001052;7.29e-07;4!UBERON:0001242;7.29e-07;4!UBERON:0001262;7.29e-07;4!UBERON:0004786;7.29e-07;4!UBERON:0004808;7.29e-07;4!UBERON:0001277;7.29e-07;4 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.06e-09!235;DOID:14566!3.78e-09!239;DOID:2531!9.52e-09!51;DOID:0060083!9.52e-09!51;DOID:1240!2.59e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.85e-07;1!DOID:10165;1.85e-07;1!DOID:1798;1.85e-07;1!DOID:6193;4.97e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.10e-07,1;DOID:10165,2.10e-07,1;DOID:1798,2.10e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;4.97e-07;1!UBERON:0001343;4.97e-07;1!UBERON:0004910;4.97e-07;1!UBERON:0004813;4.97e-07;1!UBERON:0001052;7.29e-07;4!UBERON:0001242;7.29e-07;4!UBERON:0001262;7.29e-07;4!UBERON:0004786;7.29e-07;4!UBERON:0004808;7.29e-07;4!UBERON:0001277;7.29e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.67e-07,1;UBERON:0001343,2.67e-07,1;UBERON:0004910,2.67e-07,1;UBERON:0005154,2.67e-07,1;UBERON:0005295,2.67e-07,1;UBERON:0004813,2.67e-07,1;UBERON:0005297,2.67e-07,1;UBERON:0005294,2.67e-07,1;UBERON:0010141,2.67e-07,1;UBERON:0005891,2.67e-07,1;UBERON:0001052,5.15e-07,4;UBERON:0001242,9.21e-07,4;UBERON:0001262,9.21e-07,4;UBERON:0004786,9.21e-07,4;UBERON:0004808,9.21e-07,4;UBERON:0001277,9.21e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0.940364164434263,0.286235987131057,0.273748850145768,0,0.305653622991805,1.06730766284929,0.472264687882075,0,0,0.154816123316076,0.919421224478927,0,0,0.154934401160603,0.142169232487422,0.587200878669695,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845021145247767,0.212604299965044,0.419317291016752,0.22465726229299,0.600707571366025,0.16072558669708,1.42506371870624,1.59133341759272,2.19196984517561,0,0,0,0.426730222566507,0,0,0,0,0,1.17447437874188,0,0,0,0.790152254325231,0,0,0.205601498999509,0.501559486172034,0,0.473447805734733,0,0.334231370655521,0,0.221533894583621,0,0.768547918354051,0.260118695119756,0.493313713811028,0.552700035571697,0.289803085735052,0,0.267540828089713,0,0.679856056185397,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0.255725123687061,1.44575660953827,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.417989933073621,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.625098097988558,0.673588117878509,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0.680593098960126,0,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0.365921118388786,0.397589304964456,0.464775771478074,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.330881918197182,0,0.474541238222193,0.134831308160164,0,0.769494313892781,0.738155454624648,0,0,0,0,0,0.590789906681404,0,1.10689594688802,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0.790204397959275,1.71697232418975,0,0,0.148631162288728,0,0,0,0,0.871901815541886,0.383382679165211,0,0.352193736052904,0,0,0,0,0,0,0,0.102827492703324,0,0.571652865261156,0.112131084345361,0,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0.336255431980582,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,1.03384013061444,0,0.426910231213777,0,0,0.604780586659361,0,0.153461973288062,0,0,0.511707249066704,0,0,0.154209693802656,0,0.164254312027618,0,0,0.483437798366489,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0.509752546090077,2.49322802678617,0,1.31555925987561,0.522870902049801,0.256450125116389,0,0,0.103041011647722,0,0.247528499761764,0,0,1.6068392984416,0,0,0.15350367472613,0,0.214840489736547,0,0,0.178064071293475,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.427296284509893,0,0,0.371606350251437,1.00988449083511,0.711418433484141,1.11598390910176,0.59873811429845,0,0.423347165447766,0.324621940274555,0,0.684704037099577,0.156679895773023,0,0.338583555603207,0.642352300414798,0.403599414382095,0.425846237690326,0,0.921722292925374,1.3420566473545,0.500547425135725,0.19538809540204,0,0,0.540911356951966,0.33307196799782,1.4098700508785,0,0,0,1.44876399560722,0.284136146806413,0,0.296964680832639,0,0,0,0,0.329607748453519,0,0,0.552567831062295,0,0,0.246169610922139,0,1.07842021376792,0,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0.1137934482855,0,0,0,0,0.520874984799877,0,0,0,0.110579259931225,0,0,0,0.278847488557207,0.0769502585037971,0,0,0.718061155278177,0.760531603454056,0,0.274792780205587,0,0,0,0.332423363800313,0.676786981851542,0.19606253431774,0.335643173951685,0.189753732724185,0.317873157960757,0.210998064528027,0.652931232636591,3.67517985728246,0,0,0.353830258013357,0,0,0.370691816839509,0,0,0,0,0.729819156862664,0,0,0,0,0.30607276163049,0.252746318513952,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0.694238953340524,0.0979923974143777,0.261177619741208,0.17472666824203,1.0319161948297,0.387025325156341,0.877071805034227,1.56019368401098,0,0.0882561266915003,0,0.274083849293502,0,0,0.391102765469606,0,0,0,0.144090417154106,0.572682980829578,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0.600420288709789,0.136905378891993,2.55493176133945,0,0,0.279282401272254,0,0,0.798716001995964,0,0.223171457441873,0.53746777989381,0.360299883542404,1.16495949527454,0.157566364614447,0.247247575143499,0.202210631562555,0.295282444544246,0.16934666413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| ||
|short_description=p4@TMPO | |short_description=p4@TMPO | ||
}} | }} |
Latest revision as of 06:09, 16 September 2015
Short description: | p4@TMPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMPO_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000556029_5end |
EntrezGene: | TMPO |
HGNC: | 11875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 1.76e-18 | 3 |
CD14-low, CD16-positive monocyte | 1.76e-18 | 3 |
androgen binding protein secreting cell | 2.67e-07 | 1 |
seminiferous tubule epithelial cell | 2.67e-07 | 1 |
Sertoli cell | 2.67e-07 | 1 |
intestinal epithelial cell | 9.21e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.67e-07 | 1 |
seminiferous tubule of testis | 2.67e-07 | 1 |
epithelium of male gonad | 2.67e-07 | 1 |
epithelial cord | 2.67e-07 | 1 |
sex cord | 2.67e-07 | 1 |
seminiferous tubule epithelium | 2.67e-07 | 1 |
testis sex cord | 2.67e-07 | 1 |
genital ridge | 2.67e-07 | 1 |
primitive sex cord of indifferent gonad | 2.67e-07 | 1 |
coelomic epithelium | 2.67e-07 | 1 |
rectum | 5.15e-07 | 4 |
intestinal mucosa | 9.21e-07 | 4 |
wall of intestine | 9.21e-07 | 4 |
gastrointestinal system mucosa | 9.21e-07 | 4 |
gastrointestinal system epithelium | 9.21e-07 | 4 |
intestinal epithelium | 9.21e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.10e-07 | 1 |
endocrine pancreas cancer | 2.10e-07 | 1 |
pancreatic endocrine carcinoma | 2.10e-07 | 1 |