FFCP PHASE1:Hg19::chr6:149639812..149639830,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23118 | |EntrezGene=23118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17075 | |HGNC=17075 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=94bp_to_ENST00000461481_5end | |association_with_transcript=94bp_to_ENST00000461481_5end | ||
|cluster_id=chr6:149639812..149639830,+ | |||
|coexpression_cluster_id=C388 | |coexpression_cluster_id=C388 | ||
|description=CAGE_peak_12_at_TAB2_5end | |description=CAGE_peak_12_at_TAB2_5end | ||
|id=chr6:149639812..149639830,+ | |id=chr6:149639812..149639830,+ | ||
|ontology_enrichment_celltype=CL:0000624;2.64e-22;6!CL:0000898;4.22e-12;3!CL:0000895;1.83e-09;1!CL:0000084;4.04e-08;25!CL:0000791;1.45e-07;18!CL:0000789;1.45e-07;18!CL:0002419;1.45e-07;18 | |ontology_enrichment_celltype=CL:0000838!1.55e-18!52;CL:0000542!4.69e-18!53;CL:0000051!4.69e-18!53;CL:0000791!2.99e-16!18;CL:0000789!2.99e-16!18;CL:0002420!2.99e-16!18;CL:0002419!2.99e-16!18;CL:0000790!2.99e-16!18;CL:0000084!4.44e-15!25;CL:0000827!4.44e-15!25;CL:0000624!2.18e-14!6;CL:0000080!1.63e-13!6;CL:0000738!8.65e-13!140;CL:0000988!2.93e-11!182;CL:0002087!7.40e-11!119;CL:0000037!5.41e-10!172;CL:0000566!5.41e-10!172;CL:0002031!1.40e-08!124;CL:0000898!3.85e-08!3;CL:0002032!5.13e-08!165;CL:0000837!5.13e-08!165;CL:0000623!2.00e-07!3;CL:0000825!2.00e-07!3;CL:0000842!6.12e-07!3;CL:0000625!7.19e-07!11;CL:0000453!7.57e-07!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000624;2.64e-22;6!CL:0000898;4.22e-12;3!CL:0000895;1.83e-09;1!CL:0000084;4.04e-08;25!CL:0000791;1.45e-07;18!CL:0000789;1.45e-07;18!CL:0002419;1.45e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.57e-22,6;CL:0000898,3.77e-12,3;CL:0000810,1.48e-09,1;CL:0000895,1.48e-09,1;CL:0002436,1.48e-09,1;CL:0002427,1.48e-09,1;CL:0002428,1.48e-09,1;CL:0002429,1.48e-09,1;CL:0002433,1.48e-09,1;CL:0002431,1.48e-09,1;CL:0002432,1.48e-09,1;CL:0000084,4.24e-08,25;CL:0000827,4.24e-08,25;CL:0000791,1.44e-07,18;CL:0000789,1.44e-07,18;CL:0002420,1.44e-07,18;CL:0002419,1.44e-07,18;CL:0000790,1.44e-07,18;CL:0000838,5.81e-07,52;CL:0000542,8.13e-07,53;CL:0000051,8.13e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002427;1.83e-09;1!CL:0000790;1.45e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002331;4.53e-08;10 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.53e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.22e-08,10;UBERON:0000358,4.22e-08,10;UBERON:0000307,4.22e-08,10;UBERON:0000091,4.22e-08,10;UBERON:0000087,4.22e-08,10;UBERON:0007010,4.22e-08,10;UBERON:0007806,4.22e-08,10;UBERON:0008780,4.22e-08,10;UBERON:0005728,4.22e-08,10 | |||
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| ||
|short_description=p12@TAB2 | |short_description=p12@TAB2 | ||
}} | }} |
Latest revision as of 02:06, 16 September 2015
Short description: | p12@TAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TAB2_5end |
Coexpression cluster: | C388_CD4_CD8_cord_Peripheral_Natural_Whole_thymus |
Association with transcript: | 94bp_to_ENST00000461481_5end |
EntrezGene: | TAB2 |
HGNC: | 17075 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.57e-22 | 6 |
naive T cell | 3.77e-12 | 3 |
CD4-positive, alpha-beta thymocyte | 1.48e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.48e-09 | 1 |
mature CD4 single-positive thymocyte | 1.48e-09 | 1 |
resting double-positive thymocyte | 1.48e-09 | 1 |
double-positive blast | 1.48e-09 | 1 |
CD69-positive double-positive thymocyte | 1.48e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.48e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.48e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.48e-09 | 1 |
T cell | 4.24e-08 | 25 |
pro-T cell | 4.24e-08 | 25 |
mature alpha-beta T cell | 1.44e-07 | 18 |
alpha-beta T cell | 1.44e-07 | 18 |
immature T cell | 1.44e-07 | 18 |
mature T cell | 1.44e-07 | 18 |
immature alpha-beta T cell | 1.44e-07 | 18 |
lymphoid lineage restricted progenitor cell | 5.81e-07 | 52 |
lymphocyte | 8.13e-07 | 53 |
common lymphoid progenitor | 8.13e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.22e-08 | 10 |
blastocyst | 4.22e-08 | 10 |
blastula | 4.22e-08 | 10 |
bilaminar disc | 4.22e-08 | 10 |
inner cell mass | 4.22e-08 | 10 |
cleaving embryo | 4.22e-08 | 10 |
connecting stalk | 4.22e-08 | 10 |
inner cell mass derived epiblast | 4.22e-08 | 10 |
extraembryonic mesoderm | 4.22e-08 | 10 |