FFCP PHASE1:Hg19::chr6:154567877..154567903,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26034 | |EntrezGene=26034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21204 | |HGNC=21204 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJQ7 | |UniProt=E5RJQ7 | ||
|association_with_transcript=86bp_to_ENST00000517438_5end | |association_with_transcript=86bp_to_ENST00000517438_5end | ||
|cluster_id=chr6:154567877..154567903,- | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_8_at_IPCEF1_5end | |description=CAGE_peak_8_at_IPCEF1_5end | ||
|id=chr6:154567877..154567903,- | |id=chr6:154567877..154567903,- | ||
|ontology_enrichment_celltype=CL:0000945;2.02e-33;24!CL:0000946;5.72e-18;1!CL:0000786;5.72e-18;1!CL:0000817;1.12e-17;1!CL:0000785;1.12e-17;1!CL:0000819;1.12e-17;1!CL:0000047;1.64e-09;2!CL:0000542;3.57e-09;53 | |ontology_enrichment_celltype=CL:0000838!2.10e-15!52;CL:0000542!5.09e-15!53;CL:0000051!5.09e-15!53;CL:0000791!1.20e-13!18;CL:0000789!1.20e-13!18;CL:0002420!1.20e-13!18;CL:0002419!1.20e-13!18;CL:0000790!1.20e-13!18;CL:0000624!6.21e-12!6;CL:0000817!3.19e-10!3;CL:0000084!3.01e-09!25;CL:0000827!3.01e-09!25;CL:0000945!9.75e-09!24;CL:0000826!9.75e-09!24;CL:0000785!2.12e-07!2;CL:0000955!2.12e-07!2;CL:0000818!2.12e-07!2;CL:0000954!2.12e-07!2;CL:0000816!2.12e-07!2;CL:0000815!6.56e-07!2;CL:0000792!6.56e-07!2;CL:0002677!6.56e-07!2;CL:0002087!8.38e-07!119 | ||
| | |ontology_enrichment_celltype_v019=CL:0000945;2.02e-33;24!CL:0000946;5.72e-18;1!CL:0000786;5.72e-18;1!CL:0000817;1.12e-17;1!CL:0000785;1.12e-17;1!CL:0000819;1.12e-17;1!CL:0000047;1.64e-09;2!CL:0000542;3.57e-09;53 | ||
|ontology_enrichment_disease=DOID:0060073;1.12e-17;1!DOID:8675;1.12e-17;1!DOID:0060058;1.31e-07;10 | |ontology_enrichment_celltype_v019_2=CL:0000817,2.33e-49,3;CL:0000785,9.92e-34,2;CL:0000955,9.92e-34,2;CL:0000818,9.92e-34,2;CL:0000954,9.92e-34,2;CL:0000816,9.92e-34,2;CL:0000945,2.34e-33,24;CL:0000826,2.34e-33,24;CL:0000946,6.23e-18,1;CL:0000786,6.23e-18,1;CL:0000980,6.23e-18,1;CL:0000819,1.22e-17,1;CL:0000838,3.00e-15,52;CL:0000542,5.91e-15,53;CL:0000051,5.91e-15,53;CL:0000236,3.73e-11,14 | ||
|ontology_enrichment_uberon=UBERON:0001897;1.64e-09;2!UBERON:0002360;1.64e-09;2!UBERON:0000094;1.64e-09;2!UBERON:0010225;1.64e-09;2!UBERON:0010743;1.64e-09;2!UBERON:0002106;5.80e-07;3 | |ontology_enrichment_development_v019=CL:0000954;8.39e-34;2!CL:0000051;3.57e-09;53 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.12e-17;1!DOID:8675;1.12e-17;1!DOID:0060058;1.31e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.22e-17,1;DOID:8675,1.22e-17,1;DOID:0060058,1.33e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.43e-25!57;UBERON:0005068!1.43e-25!57;UBERON:0006241!1.43e-25!57;UBERON:0007135!1.43e-25!57;UBERON:0001893!4.13e-24!34;UBERON:0002616!1.83e-22!59;UBERON:0002791!2.28e-22!33;UBERON:0001017!4.84e-22!82;UBERON:0002780!1.00e-21!41;UBERON:0001890!1.00e-21!41;UBERON:0006240!1.00e-21!41;UBERON:0007023!1.10e-21!115;UBERON:0003080!4.27e-21!42;UBERON:0005743!1.13e-20!86;UBERON:0001869!1.20e-20!32;UBERON:0001950!4.22e-20!20;UBERON:0000955!9.47e-20!69;UBERON:0006238!9.47e-20!69;UBERON:0002020!3.15e-19!34;UBERON:0003528!3.15e-19!34;UBERON:0002619!4.49e-18!22;UBERON:0000073!5.15e-18!94;UBERON:0001016!5.15e-18!94;UBERON:0003075!1.23e-17!86;UBERON:0007284!1.23e-17!86;UBERON:0002346!1.54e-16!90;UBERON:0000956!1.27e-15!25;UBERON:0000203!1.27e-15!25;UBERON:0003056!4.99e-13!61;UBERON:0000200!1.03e-11!6;UBERON:0001872!2.04e-09!5;UBERON:0000153!2.50e-09!129;UBERON:0007811!2.50e-09!129;UBERON:0002771!2.54e-09!3;UBERON:0000033!3.10e-09!123;UBERON:0000369!4.08e-07!4;UBERON:0002435!4.08e-07!4;UBERON:0000204!4.08e-07!4;UBERON:0010082!4.08e-07!4;UBERON:0004121!5.77e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;1.64e-09;2!UBERON:0002360;1.64e-09;2!UBERON:0000094;1.64e-09;2!UBERON:0010225;1.64e-09;2!UBERON:0010743;1.64e-09;2!UBERON:0002106;5.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,1.33e-09,2;UBERON:0010225,1.33e-09,2;UBERON:0002360,1.57e-09,2;UBERON:0000094,1.57e-09,2;UBERON:0010743,1.57e-09,2;UBERON:0002106,5.80e-07,3;UBERON:0004854,5.80e-07,3;UBERON:0009034,5.80e-07,3;UBERON:0002095,5.80e-07,3;UBERON:0004782,5.80e-07,3;UBERON:0003281,5.80e-07,3;UBERON:0009664,5.80e-07,3;UBERON:0002296,5.80e-07,3;UBERON:0005602,5.80e-07,3;UBERON:0001179,5.80e-07,3;UBERON:0006293,5.80e-07,3 | |||
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| ||
|short_description=p8@IPCEF1 | |short_description=p8@IPCEF1 | ||
}} | }} |
Latest revision as of 08:04, 16 September 2015
Short description: | p8@IPCEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_IPCEF1_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 86bp_to_ENST00000517438_5end |
EntrezGene: | IPCEF1 |
HGNC: | 21204 |
UniProt: | E5RJQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 2.33e-49 | 3 |
mature B cell | 9.92e-34 | 2 |
pre-B-II cell | 9.92e-34 | 2 |
transitional stage B cell | 9.92e-34 | 2 |
small pre-B-II cell | 9.92e-34 | 2 |
immature B cell | 9.92e-34 | 2 |
lymphocyte of B lineage | 2.34e-33 | 24 |
pro-B cell | 2.34e-33 | 24 |
antibody secreting cell | 6.23e-18 | 1 |
plasma cell | 6.23e-18 | 1 |
plasmablast | 6.23e-18 | 1 |
B-1 B cell | 1.22e-17 | 1 |
lymphoid lineage restricted progenitor cell | 3.00e-15 | 52 |
lymphocyte | 5.91e-15 | 53 |
common lymphoid progenitor | 5.91e-15 | 53 |
B cell | 3.73e-11 | 14 |
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 1.33e-09 | 2 |
thalamic complex | 1.33e-09 | 2 |
meninx | 1.57e-09 | 2 |
membrane organ | 1.57e-09 | 2 |
meningeal cluster | 1.57e-09 | 2 |
spleen | 5.80e-07 | 3 |
gastrointestinal system mesentery | 5.80e-07 | 3 |
stomach region | 5.80e-07 | 3 |
mesentery | 5.80e-07 | 3 |
gastrointestinal system serosa | 5.80e-07 | 3 |
mesentery of stomach | 5.80e-07 | 3 |
gut mesentery | 5.80e-07 | 3 |
dorsal mesentery | 5.80e-07 | 3 |
dorsal mesogastrium | 5.80e-07 | 3 |
peritoneal cavity | 5.80e-07 | 3 |
spleen primordium | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.22e-17 | 1 |
lymphosarcoma | 1.22e-17 | 1 |
lymphoma | 1.33e-07 | 10 |