FFCP PHASE1:Hg19::chr19:14889364..14889381,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30817 | |EntrezGene=30817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3337 | |HGNC=3337 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHX3,Q9H7M4,Q53GP0 | |UniProt=Q9UHX3,Q9H7M4,Q53GP0 | ||
|association_with_transcript=-11bp_to_ENST00000315576,ENST00000346057,ENST00000353005,ENST00000353876,ENST00000392967,NM_013447,NM_152916,NM_152917,NM_152918,NM_152919,NM_152920,NM_152921,uc002mzo.1,uc002mzp.1,uc002mzq.1,uc002mzr.1,uc002mzs.1,uc002mzt.1,uc002mzu.1_5end | |association_with_transcript=-11bp_to_ENST00000315576,ENST00000346057,ENST00000353005,ENST00000353876,ENST00000392967,NM_013447,NM_152916,NM_152917,NM_152918,NM_152919,NM_152920,NM_152921,uc002mzo.1,uc002mzp.1,uc002mzq.1,uc002mzr.1,uc002mzs.1,uc002mzt.1,uc002mzu.1_5end | ||
|cluster_id=chr19:14889364..14889381,- | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_2_at_EMR2_5end | |description=CAGE_peak_2_at_EMR2_5end | ||
|id=chr19:14889364..14889381,- | |id=chr19:14889364..14889381,- | ||
|ontology_enrichment_celltype=CL:0000473;9.93e-60;39!CL:0000234;9.93e-60;39!CL:0000860;3.88e-47;33!CL:0002057;3.88e-47;33!CL:0000766;6.22e-35;69!CL:0000235;3.28e-33;6!CL:0000097;1.02e-29;5!CL:0000576;3.62e-25;48!CL:0000163;2.01e-16;9!CL:0000763;5.61e-15;100!CL:0000738;3.08e-10;136 | |ontology_enrichment_celltype=CL:0000839!3.12e-68!70;CL:0000557!4.31e-67!71;CL:0000766!7.77e-62!76;CL:0002194!3.55e-59!63;CL:0000576!3.55e-59!63;CL:0000040!3.55e-59!63;CL:0000559!3.55e-59!63;CL:0002009!5.30e-57!65;CL:0002057!6.83e-50!42;CL:0000860!6.24e-46!45;CL:0000763!1.26e-39!112;CL:0000049!1.26e-39!112;CL:0002031!7.47e-33!124;CL:0000738!1.85e-30!140;CL:0002087!8.90e-29!119;CL:0000037!1.72e-23!172;CL:0000566!1.72e-23!172;CL:0002032!1.18e-22!165;CL:0000837!1.18e-22!165;CL:0000988!1.84e-21!182;CL:0002274!3.10e-14!5;CL:0000457!3.10e-14!5;CL:0002191!3.10e-14!5;CL:0000097!3.10e-14!5;CL:0000831!3.10e-14!5;CL:0002028!3.10e-14!5;CL:0000235!4.50e-09!10;CL:0000163!1.18e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000473;9.93e-60;39!CL:0000234;9.93e-60;39!CL:0000860;3.88e-47;33!CL:0002057;3.88e-47;33!CL:0000766;6.22e-35;69!CL:0000235;3.28e-33;6!CL:0000097;1.02e-29;5!CL:0000576;3.62e-25;48!CL:0000163;2.01e-16;9!CL:0000763;5.61e-15;100!CL:0000738;3.08e-10;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000839,5.06e-80,66;CL:0000557,9.26e-79,67;CL:0000766,5.80e-73,72;CL:0000473,2.00e-67,48;CL:0000234,2.00e-67,48;CL:0002194,4.18e-62,59;CL:0000576,4.18e-62,59;CL:0000040,4.18e-62,59;CL:0000559,4.18e-62,59;CL:0002009,6.31e-60,61;CL:0000763,6.60e-47,108;CL:0000049,6.60e-47,108;CL:0000860,7.67e-44,42;CL:0002057,7.67e-44,42;CL:0002031,1.16e-41,120;CL:0000738,4.31e-36,136;CL:0000235,4.47e-33,6;CL:0000097,9.32e-30,5;CL:0002028,9.32e-30,5;CL:0002032,1.38e-29,161;CL:0000837,1.38e-29,161;CL:0002087,1.80e-29,115;CL:0000037,4.14e-28,168;CL:0000988,2.23e-26,177;CL:0000163,1.92e-16,9;CL:0000134,4.07e-10,354;CL:0002320,8.47e-10,361;CL:0000219,1.12e-08,386;CL:0000048,2.65e-07,427;CL:0000723,4.11e-07,433;CL:0000034,7.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.80e-36;42!CL:0000049;1.81e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.23e-58!80;UBERON:0002390!8.75e-54!102;UBERON:0003061!8.75e-54!102;UBERON:0001474!3.84e-53!86;UBERON:0002193!1.02e-47!112;UBERON:0004765!2.59e-43!101;UBERON:0001434!2.59e-43!101;UBERON:0002405!2.71e-40!115;UBERON:0002204!3.09e-27!167;UBERON:0003081!4.89e-23!216;UBERON:0000926!1.98e-11!448;UBERON:0004120!1.98e-11!448;UBERON:0006603!1.98e-11!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.23e-69,76;UBERON:0001474,1.84e-63,82;UBERON:0002405,3.24e-59,93;UBERON:0004765,2.31e-57,90;UBERON:0002390,6.36e-56,98;UBERON:0003061,6.36e-56,98;UBERON:0001434,4.28e-51,100;UBERON:0002193,3.05e-50,108;UBERON:0002204,2.28e-30,167;UBERON:0003081,5.37e-24,203;UBERON:0000926,2.21e-14,315;UBERON:0004120,2.21e-14,315;UBERON:0006603,2.21e-14,315;UBERON:0002384,2.96e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,1.08505435357926,0.223915474239924,0,0.515151135268373,0.726991193897824,1.51150377475524,0.242584061187816,1.85943229524548,6.98985409637104,0.929119112685311,5.17846306179871,5.63553554364021,0.47296445977717,2.06847408441971,1.93645405075148,2.70852973188684,0.564727018627814,3.27487380069415,0,1.22433556948361,5.1348644332175,0,0.989553900560148,2.59302754908121,0,3.19230162491442,2.26954089876456,0.622822248995575,5.02497330513487,2.60741459210101,0.434377689410233,1.81619850790011,2.94622108790052,0,0,0.850417199860174,0.209658645508376,0,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0.97364218096405,1.74129737299267,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,8.42415354501256,4.7561971932393,0,0,0,0,0,0,4.92663237895944,15.1443306502749,34.2091390642274,27.0945512423888,43.6798819655275,0.063497894292169,0,0,0,0,0.600686115687835,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0.828478110694391,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.863424021355654,0,0,0,0,0,2.00134323694638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0,0,0.4226557275834,0,4.0413084731337,0.386747327841463,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,1.08505435357926,0.223915474239924,0,0.515151135268373,0.726991193897824,1.51150377475524,0.242584061187816,1.85943229524548,6.98985409637104,0.929119112685311,5.17846306179871,5.63553554364021,0.47296445977717,2.06847408441971,1.93645405075148,2.70852973188684,0.564727018627814,3.27487380069415,0,1.22433556948361,5.1348644332175,0,0.989553900560148,2.59302754908121,0,3.19230162491442,2.26954089876456,0.622822248995575,5.02497330513487,2.60741459210101,0.434377689410233,1.81619850790011,2.94622108790052,0,0,0.850417199860174,0.209658645508376,0,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0.97364218096405,1.74129737299267,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,8.42415354501256,4.7561971932393,0,0,0,0,0,0,4.92663237895944,15.1443306502749,34.2091390642274,27.0945512423888,43.6798819655275,0.063497894292169,0,0,0,0,0.600686115687835,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0.828478110694391,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.863424021355654,0,0,0,0,0,2.00134323694638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0,0,0.4226557275834,0,4.0413084731337,0.386747327841463,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p2@EMR2 | |short_description=p2@EMR2 | ||
}} | }} |
Latest revision as of 05:59, 16 September 2015
Short description: | p2@EMR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EMR2_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -11bp_to_ENST00000315576, ENST00000346057, ENST00000353005, ENST00000353876, ENST00000392967, NM_013447, NM_152916, NM_152917, NM_152918, NM_152919, NM_152920, NM_152921, uc002mzo.1, uc002mzp.1, uc002mzq.1, uc002mzr.1, uc002mzs.1, uc002mzt.1, uc002mzu.1_5end |
EntrezGene: | EMR2 |
HGNC: | 3337 |
UniProt: | Q9UHX3Q9H7M4Q53GP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.23e-69 | 76 |
bone element | 1.84e-63 | 82 |
immune system | 3.24e-59 | 93 |
skeletal element | 2.31e-57 | 90 |
hematopoietic system | 6.36e-56 | 98 |
blood island | 6.36e-56 | 98 |
skeletal system | 4.28e-51 | 100 |
hemolymphoid system | 3.05e-50 | 108 |
musculoskeletal system | 2.28e-30 | 167 |
lateral plate mesoderm | 5.37e-24 | 203 |
mesoderm | 2.21e-14 | 315 |
mesoderm-derived structure | 2.21e-14 | 315 |
presumptive mesoderm | 2.21e-14 | 315 |
connective tissue | 2.96e-10 | 371 |